The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	27282	70036	4073006	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	77634	136108	4073006	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	164892	225403	4073006	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184325_188000_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189529_190003_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193073_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194404_195355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195457_196093_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197377_198478_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198559_198934_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198993_201858_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202812_204024_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205634_206585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206741_207065_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207169_208210_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208215_208995_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209040_209337_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209362_209638_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210338_211025_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211154_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212056_212782_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214274_215207_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|215664_218460_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219053_221996_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222825_223374_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224452_225403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	265572	397543	4073006	integrase,transposase,tRNA	Klosneuvirus(10.71%)	114	308244:308261	352884:352901
WP_005012067.1|265572_266523_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267082_267628_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267711_269331_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269346_270501_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270514_270640_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270636_272388_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272384_274064_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274126_274675_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275817_276096_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|277139_278090_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268689.1|278107_278284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929826.1|278398_279091_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|279464_279965_-	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA	NA
WP_023853391.1|280071_280992_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|281008_281485_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|281578_283429_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|283484_284243_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|284270_285704_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|285777_286557_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|286569_287403_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020699616.1|287411_288182_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|288181_289246_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|289397_292025_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|292088_294710_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|295637_296096_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|296374_298618_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|298814_300839_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|300962_301925_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|302136_303276_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|303298_304264_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|304459_305650_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|305663_305909_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|305937_307959_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|308005_309613_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
308244:308261	attL	ACGGTGGCCAGCACGCTG	NA	NA	NA	NA
WP_010929808.1|309713_310883_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|313764_314715_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|314738_315797_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|315871_316246_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|316800_317751_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|319307_320153_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|320240_321404_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|321822_322794_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|322832_324260_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|324379_325171_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|325289_327743_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|327837_328947_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|328949_330359_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|330764_330899_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|330994_331366_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|331362_331635_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|331683_333375_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|333605_334556_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929840.1|335013_335937_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814626.1|335945_336344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929841.1|336585_338556_+	type III secretion system effector BopC	NA	NA	NA	NA	NA
WP_010929843.1|340042_341032_+|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010926403.1|341028_341229_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929845.1|341341_341683_-	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_019247983.1|341693_342878_-	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929847.1|342914_343442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929848.1|343499_344147_-	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929849.1|344143_345130_-	recombinase RecT	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010926410.1|345133_345316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926411.1|345312_345690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929850.1|345923_346391_-	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010929851.1|346426_347377_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010926414.1|347475_347718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929852.1|347884_348526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|348536_349487_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248860.1|349596_349992_-	RidA family protein	NA	NA	NA	NA	NA
WP_010929854.1|350161_350863_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010929855.1|351126_351987_+	hypothetical protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
WP_003807743.1|352061_352397_-	YegP family protein	NA	NA	NA	NA	NA
WP_010929856.1|352537_353683_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
352884:352901	attR	ACGGTGGCCAGCACGCTG	NA	NA	NA	NA
WP_010929857.1|353710_354370_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010929858.1|355374_355581_+	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
WP_003807750.1|355846_355978_+	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_094145972.1|356424_363327_+	autotransporter BatB	NA	NA	NA	NA	NA
WP_023853476.1|363378_363960_+	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_010929862.1|364232_365210_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929863.1|365244_366798_+	acyl--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	1.5e-13
WP_010929864.1|366805_367546_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929865.1|367569_368334_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003807759.1|368378_368714_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_023853484.1|368767_369697_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|369656_370607_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929866.1|370725_371670_-	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_003816336.1|371666_372908_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_005013747.1|373069_374020_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807322.1|374016_374691_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929867.1|374775_375771_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929868.1|375925_377215_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003807315.1|377466_377658_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003807313.1|377764_379084_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_010929869.1|379154_379724_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929870.1|379904_380492_+	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.1e-07
WP_010929871.1|380498_381101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818481.1|381097_381754_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929872.1|381750_382377_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010929873.1|382399_383338_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_005013747.1|383403_384354_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807300.1|384452_384965_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_003818477.1|385066_386317_-	kynureninase	NA	NA	NA	NA	NA
WP_023853429.1|386453_386939_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929874.1|387039_388152_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_003807291.1|388265_389174_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929875.1|389316_389793_+	membrane protein	NA	NA	NA	NA	NA
WP_003807287.1|389827_390844_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929876.1|390957_392199_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_010929877.1|393332_394298_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807278.1|394344_394836_-	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_003818466.1|394931_395831_-	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_010929878.1|395960_396596_+	LysE family transporter	NA	NA	NA	NA	NA
WP_005013747.1|396592_397543_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	637788	698978	4073006	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|637788_638739_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|639235_640105_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|640101_640923_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|641121_641613_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|641631_642705_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|642751_643855_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|643930_644551_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|644571_645081_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|645135_645387_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|645450_646584_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|646591_646978_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|646974_649494_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|649922_650261_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|650257_650764_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|650825_651626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|651736_652678_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|652771_654307_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|655986_657837_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|657840_658674_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|658673_659615_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|659866_660838_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|660979_663268_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|663574_664483_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|664537_665503_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|665577_667239_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|667310_668021_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|667987_668152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|668169_669120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|669818_670202_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|670259_670862_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|670879_671281_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|671414_672308_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|672304_672886_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|673680_674415_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|674455_675505_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|675652_676231_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|676617_677595_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|677688_682083_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|682283_683132_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|683290_684103_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|684158_685109_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|685207_686008_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|686069_686453_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|686464_687898_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|688104_688434_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|688436_689186_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|689368_690289_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|690335_690548_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|690570_690993_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|691009_692110_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|692206_693724_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|693799_694639_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|694660_695542_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|695623_696718_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|697011_697962_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|698036_698978_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	704302	750493	4073006	transposase,terminase,tRNA,tail	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|704302_705328_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|705368_705608_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|705677_707267_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|707266_707815_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|707895_708468_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|708486_709398_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|709471_710440_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|710562_711636_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|711640_713461_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|713537_714488_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|714576_714912_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|715045_715696_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|715717_717136_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|717205_717961_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|717929_718688_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|718698_719580_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|719596_720304_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|720306_721065_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|721274_723017_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|723009_723534_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|723573_724368_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|724535_725609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|725707_726658_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|726909_727116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|727187_727799_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|728353_728605_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|728597_729287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|729304_729526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|729543_730494_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|731133_731619_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|731605_732883_+|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|732885_734304_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|734332_735388_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|735393_735636_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|735758_736361_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|736789_737740_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|738414_738666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|738728_739211_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|739212_739413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|739412_739808_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|739804_740203_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|740199_740622_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|740629_741130_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|741384_741903_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|741912_742242_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|742259_742550_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|742575_745188_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|745197_745557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|745624_746158_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|746154_746544_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|746536_750493_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 7
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	756659	810589	4073006	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|756659_758390_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|758442_758871_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|758873_759554_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|759553_760012_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|760048_761023_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|761039_762356_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|762387_762885_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|762971_763661_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|763660_764710_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|764706_765501_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|765669_766020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|765995_766553_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|767682_768633_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|770770_772000_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|772002_773445_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|773549_774695_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|774726_775524_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|775548_777108_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|777104_779477_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|779586_780690_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|780689_781382_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|781525_782227_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|782211_782589_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005013747.1|783320_784271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|784430_785303_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|785643_785862_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|785901_787281_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|787322_788720_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|788759_790412_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|790415_791300_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|791299_792241_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|792319_793939_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|794105_794921_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|794988_795558_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|795558_796509_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|797163_798261_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|798294_799560_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|799717_800668_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|800911_801502_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|801517_803962_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|804081_805053_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|805184_805709_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|805668_806619_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826566.1|806840_809036_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|809108_809537_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|809638_810589_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	901467	950731	4073006	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
WP_010929591.1|901467_902418_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|902435_902990_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|902991_903426_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|903422_903857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|903840_904644_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|904660_905476_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_019248500.1|905472_906288_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|906434_907136_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|907163_909122_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|909204_910155_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|910375_911044_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|911167_912274_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|912286_915400_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|915396_916890_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|916904_917576_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|917619_918114_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|918254_918902_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|919005_921054_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|921050_923063_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|923088_924423_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|924531_925524_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|925590_927675_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|927699_928671_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|928799_929831_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|929834_930986_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|931156_932080_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|932157_932982_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|933178_934195_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|934391_935375_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|936973_938362_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|938392_939382_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|939492_940725_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|941006_941807_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|941829_944061_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|944848_945295_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|945316_946063_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|946206_947184_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|947817_948429_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|948422_949640_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|949780_950731_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	960343	1025283	4073006	transposase	Bacillus_phage(18.18%)	58	NA	NA
WP_005012067.1|960343_961294_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|961290_963123_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|963521_964181_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|964274_964421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|964529_964697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|964708_965389_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|965670_966387_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|966401_967703_-	phospholipase A	NA	NA	NA	NA	NA
WP_029444137.1|969847_972736_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|972959_974312_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|974340_974862_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|974858_976313_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|976347_976596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|976701_977577_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|977602_978658_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|978670_979462_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|979494_980865_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010929591.1|982041_982992_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|983044_983266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|983425_983638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|983757_984876_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|985381_985633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|985745_986696_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|986692_987076_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|987130_988945_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|989094_989922_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|989967_990948_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|990944_991157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|991153_992335_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|992498_993233_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|993234_995847_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|995982_997896_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|998511_998922_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|999019_1000105_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|1000203_1001154_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|1001150_1002125_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|1002249_1003161_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|1003437_1003830_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|1003959_1004910_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|1004939_1005122_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|1005894_1007076_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|1007291_1007969_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|1007965_1008691_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|1008816_1009398_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|1009768_1012450_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|1012449_1013583_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|1013575_1014661_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|1014747_1015647_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|1015643_1016972_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|1016986_1017658_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|1017845_1019561_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|1019562_1019922_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|1020113_1020428_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|1020470_1021691_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|1021687_1022629_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|1022625_1023615_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|1023649_1024234_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1024332_1025283_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	1044683	1107834	4073006	transposase	Enterococcus_phage(16.67%)	54	NA	NA
WP_005012067.1|1044683_1045634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|1045738_1046788_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1046925_1047942_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1049450_1050023_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1050082_1050814_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1050865_1051783_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1052590_1055770_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1055766_1057149_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1057218_1057470_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1057615_1058230_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1058416_1060531_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1060606_1061458_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1061454_1062081_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1062077_1063832_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1064124_1066830_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1066842_1068504_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1068516_1070307_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1070528_1071704_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1071746_1072697_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1072795_1073536_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1073730_1075767_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1075784_1076795_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1076912_1078106_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1078135_1078909_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1078905_1080096_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1080121_1081060_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1081056_1083405_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1083559_1084201_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1084304_1085438_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1085530_1085683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1085714_1086263_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1086281_1086767_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1086944_1087883_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1087885_1088203_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1088248_1089193_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1090873_1091524_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1091577_1091913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1091909_1092770_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1092786_1093068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1093141_1093405_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1093648_1094599_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1094897_1095635_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1096070_1096394_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1096428_1096989_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1097109_1097985_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1097997_1098945_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1099046_1099340_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1099366_1101424_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1101438_1101939_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1102012_1103719_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1104582_1105635_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1105687_1106077_+	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1106085_1106718_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010929632.1|1106817_1107834_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	1113818	1172838	4073006	transposase,tRNA,protease,holin	uncultured_Mediterranean_phage(37.5%)	49	NA	NA
WP_015041211.1|1113818_1115246_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1116183_1117200_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1117532_1118468_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1118517_1120398_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1120464_1120809_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1120953_1122090_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1122086_1123160_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1123317_1124754_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1124844_1125486_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1125822_1126839_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019248433.1|1127171_1129919_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1129985_1131407_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1131670_1132387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1132471_1132789_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1132829_1133243_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1133244_1133604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1133646_1135191_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1135274_1136105_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1136139_1137294_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_014486065.1|1138330_1140619_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1141825_1142290_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1142316_1143267_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1143284_1143422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1143634_1144411_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1144455_1145313_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1145334_1146351_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1146485_1147526_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1147720_1149802_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1150037_1151531_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1151761_1152556_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1152776_1154135_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1154131_1154974_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1154992_1156879_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1156820_1157072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1157116_1157749_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1157767_1158370_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930048.1|1158521_1159472_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1160052_1160760_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1161118_1162105_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1162244_1163258_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_010930048.1|1163254_1164205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1164222_1164363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1164317_1164776_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1164812_1166126_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1166143_1166515_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1166511_1167975_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1168115_1168844_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1168825_1171675_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1171887_1172838_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	1364275	1432762	4073006	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1364275_1365226_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1365994_1366633_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1367522_1367969_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_010930284.1|1368050_1368752_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1368752_1369520_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1369516_1370755_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1370754_1371681_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1371783_1372899_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1372914_1373865_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1374218_1374800_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1374796_1375630_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1375840_1377154_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1377330_1378212_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1378231_1379083_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1379135_1380224_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1380334_1381462_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1381696_1382308_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_005012808.1|1382406_1383357_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1383578_1383956_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1384103_1384601_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1384597_1385125_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1385258_1386074_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930292.1|1386086_1387268_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1387315_1388209_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1388335_1388806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1388931_1389759_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1389787_1390564_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1390560_1390836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1390850_1391315_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1391326_1392028_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|1392137_1392638_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1392720_1393899_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1395526_1395862_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1396049_1397498_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1397555_1397900_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1398006_1398546_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1398638_1399589_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999972.1|1399606_1399846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1400327_1400759_-	YXWGXW repeat-containing protein	NA	NA	NA	NA	NA
WP_010930300.1|1400940_1401345_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1402581_1402905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1402907_1403795_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1403827_1404253_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1404324_1404678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1404917_1405424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1405462_1406794_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1406853_1407669_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1407665_1408520_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1411582_1414126_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1415492_1417247_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1417243_1419364_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1419368_1421564_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1421560_1424902_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1427704_1428655_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1428720_1428900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1429016_1429772_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1429758_1430904_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1431811_1432762_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	1493253	1548741	4073006	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1493253_1494204_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1495405_1495852_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1495844_1497320_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1497316_1498072_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1498064_1499075_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1499064_1500741_-	flagellar M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1501053_1501386_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1501399_1501795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1501804_1502131_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
WP_019247563.1|1502127_1502454_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1502380_1503403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1503399_1503750_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1503797_1504226_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1504233_1505607_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1505747_1506125_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1506387_1507695_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1507755_1508586_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1508582_1509071_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1509112_1510633_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1510676_1511153_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1511956_1514554_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1514583_1515405_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1516131_1516881_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1517064_1517943_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1518040_1518757_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1518771_1519332_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1519498_1520263_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1520282_1521140_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1521136_1522336_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1522375_1523710_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1523762_1526099_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1526224_1526788_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1526796_1527888_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1527959_1528415_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1528415_1529210_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1529206_1530388_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1530374_1530980_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1530976_1531750_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1531761_1532589_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1532750_1535114_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1535181_1535901_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1536024_1536450_+	NfeD family protein	NA	NA	NA	NA	NA
WP_005012067.1|1536484_1537435_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1537552_1538479_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1538544_1539702_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1539682_1540150_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1540297_1541248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1541264_1541699_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1541688_1542039_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1542235_1543390_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811746.1|1543386_1544559_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1544606_1545500_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1545545_1545983_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1546042_1546732_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1546741_1547692_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1547790_1548741_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	1841306	1889321	4073006	transposase,tRNA	Moraxella_phage(18.18%)	42	NA	NA
WP_010930522.1|1841306_1842257_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1842355_1844956_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1845062_1846067_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1846175_1847516_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1847556_1848585_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1848780_1849326_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1849322_1849883_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1849981_1850932_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1850969_1851557_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|1851574_1851958_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|1853317_1854610_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1854744_1855785_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1855882_1856899_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003811015.1|1857166_1857814_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1857939_1858698_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|1858682_1859462_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|1859479_1860364_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1860360_1861140_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_010930528.1|1861244_1861844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1862132_1862885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1863003_1864404_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1864427_1864826_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1865001_1865202_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1865340_1866069_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1866202_1867618_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1867621_1868485_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1868497_1869247_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_019247881.1|1869429_1871445_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247882.1|1871426_1872095_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|1872869_1873820_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1873918_1874869_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1875017_1875356_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1875413_1875575_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1875606_1875807_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1876072_1878646_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|1878716_1881266_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|1883816_1884305_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1884396_1885548_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1885601_1886423_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1886461_1887691_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1887819_1888260_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|1888370_1889321_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	1950883	2010153	4073006	transposase,tRNA,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1950883_1951834_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1951958_1952768_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929577.1|1952968_1953919_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1955192_1956410_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1957466_1958369_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1958445_1959318_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1959448_1959817_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1959874_1960921_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1961116_1962373_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1962377_1963715_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1963864_1964821_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1964923_1965856_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1965971_1966292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1966284_1966644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1966691_1968266_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1968318_1969263_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1969280_1970111_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1970103_1971738_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1971734_1973090_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1973996_1975574_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1975577_1976852_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1976949_1977324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1979039_1980173_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1980210_1980816_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1980812_1981631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1981702_1984327_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1984313_1984568_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1984634_1985216_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1985519_1985780_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1985945_1986569_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1986568_1987342_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1987338_1988547_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1988572_1989046_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1989119_1990070_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1990168_1991119_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1991217_1992567_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1993332_1994088_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1994180_1997063_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1997385_1997811_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1997838_1998987_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1998983_1999490_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|1999496_2000792_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_023995843.1|2000850_2002137_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|2002138_2002777_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|2002779_2003940_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|2003966_2005322_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|2005325_2006396_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|2006534_2006771_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|2006858_2007965_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|2007930_2009235_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|2009253_2010153_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 16
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2020393	2080895	4073006	transposase	Staphylococcus_phage(14.29%)	59	NA	NA
WP_005013747.1|2020393_2021344_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|2021543_2022629_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|2022644_2023406_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170954295.1|2023402_2024362_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_010930780.1|2024424_2024925_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|2024957_2025701_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|2025796_2026036_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|2026049_2026202_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|2026287_2027778_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|2027869_2028808_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|2028804_2028981_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|2028983_2029646_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|2031267_2031411_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|2031407_2032382_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|2032276_2032531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2032548_2033499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|2033495_2034770_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|2034873_2036067_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|2036063_2036717_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|2036713_2038150_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|2038137_2038497_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162493101.1|2039311_2039452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930768.1|2040416_2042282_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2042539_2044060_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2044147_2044798_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930766.1|2045746_2047042_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2047063_2047948_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2048046_2048922_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2048911_2049268_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|2049398_2050373_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2050502_2050682_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2050779_2051304_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2051314_2052151_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2052263_2052635_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2052631_2053183_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2053198_2054890_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2054938_2055619_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2055866_2056331_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2056500_2057430_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2057442_2058090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2058163_2059981_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2060064_2061015_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2061667_2062618_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812199.1|2062636_2062984_-	GFA family protein	NA	NA	NA	NA	NA
WP_010930755.1|2063012_2064452_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_010930754.1|2064470_2064866_-	VOC family protein	NA	NA	NA	NA	NA
WP_003812191.1|2065040_2065649_+	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930753.1|2065661_2066480_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_010930752.1|2066431_2067406_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812183.1|2067434_2068496_-	XdhC family protein	NA	NA	NA	NA	NA
WP_010930751.1|2068492_2070709_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_010930750.1|2070722_2071181_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003812179.1|2071338_2071683_-	exported protein	NA	NA	NA	NA	NA
WP_010930749.1|2071839_2072745_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930748.1|2072831_2073845_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930153.1|2075824_2076841_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019247707.1|2076983_2078336_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_003812172.1|2078510_2078807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2079944_2080895_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2342179	2403527	4073006	transposase,tRNA	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2342179_2343130_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2343246_2343966_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2344138_2345125_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2345125_2345608_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2345611_2346895_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2346891_2347830_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2347826_2349536_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2349545_2350793_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2352403_2353693_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_020699606.1|2354830_2355589_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	6.7e-31
WP_010930601.1|2356265_2357009_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2357083_2357824_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2358019_2358856_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2358906_2359677_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2359726_2360779_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2360775_2361402_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930596.1|2361398_2362433_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2362611_2363628_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2363726_2364677_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2367417_2368707_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930798.1|2368825_2369263_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2369306_2370515_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2370661_2371126_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2371149_2372100_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2373084_2373858_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2373854_2374853_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2374937_2375714_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2375869_2377474_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2377854_2378979_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2379105_2379729_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2379725_2381627_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2381675_2382470_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2382482_2383484_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_004568494.1|2383480_2383987_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2383979_2384828_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2384925_2385468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2385511_2386462_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2386617_2386944_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2386940_2387225_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2387221_2387701_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2387697_2389326_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2389322_2389667_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2389666_2392600_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2393758_2394709_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2394807_2395104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2395210_2396128_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2396132_2396846_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2396859_2397831_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249653.1|2399550_2399931_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2399934_2401122_+	MFS transporter	NA	NA	NA	NA	NA
WP_170954298.1|2401545_2402283_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2402576_2403527_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2424318	2495472	4073006	transposase	Tetraselmis_virus(10.0%)	55	NA	NA
WP_005012067.1|2424318_2425269_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2425821_2427447_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2427496_2428531_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2428533_2429880_-	BatD family protein	NA	NA	NA	NA	NA
WP_010930477.1|2429876_2431391_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2431381_2432392_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2432865_2433807_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2433815_2434784_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2436323_2437292_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2437469_2438459_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2438505_2439264_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2439453_2440191_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_005012808.1|2440289_2441240_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2441424_2442207_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2442200_2442902_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2443141_2443744_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2445070_2446021_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2446017_2447574_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2447566_2448340_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2448398_2449349_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2449430_2450606_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2450619_2452677_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2452673_2453699_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2453710_2455000_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2455022_2456120_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2456116_2457007_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2457003_2459088_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2459119_2460289_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2460330_2461071_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2461070_2461841_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247171.1|2462165_2462333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930465.1|2462696_2463482_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2463508_2465593_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2465760_2467716_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2468039_2468540_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2468638_2470165_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2470302_2471190_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2471204_2472158_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2472209_2474300_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2474315_2474702_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2477395_2478199_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2479492_2480395_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2480459_2481236_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2481557_2482607_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2482730_2484401_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2484405_2485200_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2485298_2486249_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2486268_2487174_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2487251_2487950_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2488109_2489054_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2489063_2490551_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2490550_2491618_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2491681_2493094_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2493279_2494500_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2494521_2495472_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2579671	2641965	4073006	transposase,tRNA	Salmonella_phage(18.18%)	55	NA	NA
WP_010929591.1|2579671_2580622_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2580720_2581491_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2581487_2582159_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2582155_2582797_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2582809_2583730_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2583890_2585051_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2585092_2586043_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_169507376.1|2586707_2586908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2587030_2588725_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2588846_2589116_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2589231_2589630_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2589640_2590597_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2590733_2591279_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2591299_2593249_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2593636_2594413_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2594418_2594811_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2595232_2596183_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2596179_2597277_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2597308_2598259_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2600035_2601277_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2601288_2602062_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2602088_2603039_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2603137_2603920_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2604008_2605235_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814013.1|2605960_2607346_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2607364_2607970_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2607966_2609823_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2609819_2610620_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2610634_2611828_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2611895_2612870_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2612992_2614216_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2614326_2616531_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2616825_2617485_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2617492_2617699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2618037_2618793_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814022.1|2618808_2618970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814023.1|2619063_2619579_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2619851_2620169_+	virulence factor	NA	NA	NA	NA	NA
WP_170954289.1|2620113_2620758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2620883_2622239_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2622285_2623626_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2623727_2624360_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814032.1|2624359_2626720_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2626761_2627721_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2627707_2628394_+	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_005015014.1|2628390_2628723_+	multidrug transporter	NA	NA	NA	NA	NA
WP_010929577.1|2628838_2629789_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814040.1|2629785_2631852_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_003814042.1|2631851_2632124_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_017685545.1|2632818_2632908_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_010930949.1|2632907_2634692_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_010930950.1|2634715_2636881_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_003814050.1|2636891_2637491_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_003814052.1|2640310_2641006_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_005013747.1|2641014_2641965_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2728082	2768751	4073006	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2728082_2729033_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2729143_2729326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2729425_2730022_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2730205_2731297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2731796_2732207_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2732265_2732607_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2732612_2735030_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2735042_2736065_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2736139_2736499_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2736514_2736712_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2737047_2737998_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2738192_2738642_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2738638_2739589_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2739699_2741148_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2741262_2741544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2741647_2742598_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2742842_2743556_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2743678_2743906_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2744200_2744839_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2744947_2745982_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2745978_2746929_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2747344_2747869_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2747872_2748142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2748340_2749402_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2749485_2751120_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2751121_2751925_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2751953_2752913_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2752916_2754431_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2754467_2755472_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2755903_2756374_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2756409_2757021_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2757051_2757675_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2757755_2759288_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2759322_2760564_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2760607_2761639_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2761635_2762805_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931025.1|2762798_2763479_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|2763640_2764483_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2764645_2765617_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2765788_2766667_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2766689_2767760_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2767800_2768751_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2824216	2897086	4073006	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2824216_2824633_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2824743_2825376_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2825404_2825848_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2825869_2826961_-	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931063.1|2827015_2827816_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2827951_2828572_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931065.1|2828711_2829185_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2830324_2831275_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2831271_2838933_-	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2839173_2843220_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2843532_2844114_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2844110_2845409_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2845488_2846517_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2846777_2847728_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2847724_2848675_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2848991_2849597_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2849650_2850964_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2851038_2851509_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2851508_2852297_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2852307_2853960_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2854047_2854998_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2856159_2856666_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2856662_2857427_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2857442_2857727_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2857791_2858781_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2858952_2859882_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2859853_2860540_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2860573_2861119_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2861163_2862429_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2862425_2863328_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2864509_2865454_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2865548_2867066_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2867107_2868736_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2868843_2869725_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2872837_2873212_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2873236_2873575_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2873618_2875253_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2875291_2876638_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2876745_2878167_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2878236_2878821_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2878923_2879874_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2880008_2881115_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2881125_2882223_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2882367_2883573_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2883579_2884101_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2884097_2884589_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2884585_2884837_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2884817_2885303_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2885438_2888900_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2888917_2889802_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2889811_2890243_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2890489_2890993_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2891070_2892471_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2892545_2893421_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2893417_2894425_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2894892_2895198_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2895288_2895879_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930158.1|2896069_2897086_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2900229	2967040	4073006	transposase,protease	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_010929956.1|2900229_2901180_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2901278_2902229_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2902225_2903020_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2903051_2903756_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2903830_2904631_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2904627_2905035_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2905031_2905673_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2905665_2907666_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2908926_2910258_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930179.1|2910254_2911205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2912911_2913178_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2913885_2914224_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2918777_2919380_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2919476_2920766_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2920823_2921555_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2921551_2922355_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2922351_2923440_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2923436_2924366_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2924514_2925660_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2925681_2926632_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2926649_2926808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2926962_2930784_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2930940_2931609_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2931613_2933287_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2933305_2934625_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2934629_2936945_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2937000_2939169_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2939165_2944355_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2944444_2944759_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2944986_2945232_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2945326_2945845_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2945944_2947150_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2947265_2948663_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2948779_2949358_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2949430_2950822_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2950989_2951940_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2952220_2952841_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2952837_2953251_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2953247_2954291_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2954346_2954535_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2954544_2955309_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2955399_2956056_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2956147_2956906_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2956931_2958533_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2958733_2959738_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2959838_2960102_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2960219_2960996_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2961586_2962537_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2964920_2966033_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2966089_2967040_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	2997425	3037663	4073006	transposase	Planktothrix_phage(50.0%)	39	NA	NA
WP_005012067.1|2997425_2998376_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2998393_2998543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2998496_2999393_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|3001670_3003896_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|3004060_3005149_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|3005105_3005759_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|3005806_3006604_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|3007135_3008086_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|3008160_3009315_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|3009371_3010322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|3010420_3010726_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|3010754_3011189_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|3011190_3012435_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|3012431_3013142_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|3013156_3014068_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_155120814.1|3014255_3014420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929584.1|3014437_3015388_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931149.1|3015479_3015884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|3015880_3016339_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|3016345_3017254_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|3017250_3018117_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|3018103_3018931_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|3018941_3020069_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|3021146_3022385_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|3022426_3023689_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|3023695_3024448_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|3024499_3024685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|3024960_3025425_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|3025456_3026116_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|3026260_3028369_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|3028365_3029316_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|3029419_3030040_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|3030131_3030884_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|3032018_3033143_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|3033188_3033557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3033798_3034749_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|3035784_3036327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|3036524_3036695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3036712_3037663_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	3396076	3449817	4073006	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3396076_3397027_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3397431_3398076_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3398100_3398685_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3398785_3399403_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3399405_3401121_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3401117_3401426_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3401442_3402060_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3402104_3402407_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3402507_3403362_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3403549_3403774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3403943_3404216_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3404633_3405041_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3405410_3406205_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3406305_3407541_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3407609_3408626_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3408637_3410014_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3410010_3411207_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3411203_3412742_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3412738_3413998_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3415938_3416889_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3417655_3418750_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3418742_3420077_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3420030_3420714_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3420739_3421903_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3421899_3422901_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3422900_3423773_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3423769_3424519_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3424515_3425307_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3425303_3426443_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3426718_3427504_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3427537_3428320_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3428323_3428713_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3429852_3430716_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3430751_3431840_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3431836_3432787_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3433140_3436119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3437045_3437924_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3439872_3440823_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3440819_3441287_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3441329_3442100_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010927090.1|3442120_3442921_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3442931_3444341_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3444435_3445221_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3445460_3446477_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3446584_3446977_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3447114_3447795_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3447799_3448771_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3448866_3449817_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	3455972	3515272	4073006	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3455972_3457736_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3457847_3458726_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3458838_3459654_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3459657_3459909_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3459993_3461010_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3461340_3461562_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3463922_3464840_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3465337_3466546_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3466625_3468197_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3468314_3469250_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3469438_3470383_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3470950_3476668_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3476673_3477801_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3477856_3478483_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3478754_3479771_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3479866_3480577_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3480573_3481563_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3481658_3483290_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3483292_3484030_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3484185_3485058_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3485326_3486547_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3486543_3487203_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3487274_3487907_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3487936_3488455_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3488465_3489575_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3489621_3490476_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3490477_3491380_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3492602_3493553_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3495309_3496299_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3496295_3496454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3496474_3497263_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3497259_3498291_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3498309_3498873_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3498928_3500449_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3500712_3501417_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3501424_3502162_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3502267_3502642_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3502684_3503974_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3503970_3505140_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3505136_3505976_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3506035_3506971_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3506983_3507934_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3508032_3508995_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3509026_3509386_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3509510_3510413_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3510414_3512187_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3512221_3512998_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3514321_3515272_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	3530210	3588283	4073006	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3530210_3531161_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3531289_3532423_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3532466_3533372_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3533374_3535075_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3535071_3535992_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3535999_3536977_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3537035_3538070_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3540044_3540281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3540407_3541271_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3541359_3542181_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3542260_3542998_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3542994_3543987_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3544100_3544763_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3544807_3545956_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3548279_3549230_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3549570_3550521_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3550619_3551570_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3551866_3552364_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3552406_3554182_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3554189_3555056_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3555062_3555797_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3556966_3557761_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3558050_3558641_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3558674_3560003_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3560077_3561223_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3561334_3562333_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3562295_3562730_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3564246_3565131_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3565127_3566333_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3566329_3567190_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3567302_3569093_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3569133_3569799_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3569799_3570108_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3570273_3571560_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929969.1|3572993_3573944_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3575895_3577110_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3577215_3578205_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3578201_3578810_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3578822_3579452_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3579448_3580069_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3580100_3580892_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3581743_3582199_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3582217_3583144_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3583197_3584484_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3585414_3586287_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3586283_3587234_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3587332_3588283_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	3598083	3669424	4073006	transposase,tRNA	Paramecium_bursaria_Chlorella_virus(20.0%)	59	NA	NA
WP_010929957.1|3598083_3599358_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3600080_3601031_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3601129_3602080_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929955.1|3602178_3604554_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929954.1|3604573_3605410_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929953.1|3605406_3606204_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929952.1|3606200_3608390_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010929951.1|3608441_3609428_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929950.1|3609509_3611312_-	DNA alkylation response protein	NA	NA	NA	NA	NA
WP_010929949.1|3611569_3613687_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929948.1|3613716_3614901_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929947.1|3614922_3615411_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929946.1|3615560_3617393_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	48.1	4.3e-156
WP_010929945.1|3617590_3618571_-	NAD(P)-dependent oxidoreductase	NA	M1IDV7	Acanthocystis_turfacea_Chlorella_virus	29.5	7.6e-11
WP_010929944.1|3618627_3619647_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815697.1|3619710_3620604_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929943.1|3621002_3621782_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929942.1|3621781_3623923_+	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010929941.1|3624070_3625015_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929940.1|3625098_3626082_-	oxidoreductase	NA	NA	NA	NA	NA
WP_003815690.1|3626446_3627721_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929939.1|3627751_3628180_+	RidA family protein	NA	NA	NA	NA	NA
WP_003815682.1|3628190_3628865_+	DUF1028 domain-containing protein	NA	NA	NA	NA	NA
WP_010929938.1|3628857_3630030_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_010929937.1|3630162_3631182_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929936.1|3631362_3632553_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929935.1|3632566_3633697_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929934.1|3633740_3635462_-	D-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_003815672.1|3635580_3636543_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815671.1|3636649_3637621_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247835.1|3638239_3638908_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003815668.1|3638904_3639312_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010929577.1|3639308_3640259_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3642703_3643438_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3643847_3644027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3644217_3645531_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3645546_3647058_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3647054_3648260_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3648455_3649433_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446199.1|3649525_3650020_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003814720.1|3650149_3651208_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_010927086.1|3651204_3652824_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_157734656.1|3652783_3653053_-	GtrA family protein	NA	NA	NA	NA	NA
WP_010929784.1|3653011_3654115_+	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_010929783.1|3654111_3654567_+	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_003814709.1|3654572_3655496_-	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929782.1|3655585_3656245_-	LysE family translocator	NA	NA	NA	NA	NA
WP_047122777.1|3656241_3657156_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930363.1|3657244_3658195_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486055.1|3658270_3659251_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|3659711_3660311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807867.1|3660379_3661372_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_062826569.1|3661421_3663011_+	rhodanese homology domain-containing protein	NA	NA	NA	NA	NA
WP_014486053.1|3663051_3663948_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486052.1|3663944_3665651_+	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_019247259.1|3665818_3666997_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486051.1|3666993_3667764_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_014486050.1|3667812_3668514_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486049.1|3668440_3669424_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	3739246	3793441	4073006	transposase,protease	Paramecium_bursaria_Chlorella_virus(14.29%)	54	NA	NA
WP_005013747.1|3739246_3740197_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|3740319_3741048_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|3741144_3742323_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3742319_3743153_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3743189_3743930_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3744049_3745225_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3745221_3746175_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3746188_3746590_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|3746582_3747188_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3747275_3747440_-	rubredoxin	NA	NA	NA	NA	NA
WP_010929734.1|3747556_3748405_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003814984.1|3748401_3749055_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3749071_3750355_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3750594_3752220_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3752313_3752715_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3752739_3753174_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3753175_3754825_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3754865_3756035_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929730.1|3756037_3756901_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3760264_3760969_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3760962_3761757_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3761753_3762719_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3762722_3763643_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3763739_3764903_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3765125_3766016_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3766019_3766523_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3766565_3767564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3767560_3768511_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3768599_3768887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3769078_3770029_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|3770088_3770649_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3772151_3773033_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3773146_3774349_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3774477_3776337_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3776414_3777224_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3777294_3778296_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3778327_3779188_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3779387_3780392_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3780388_3781975_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3781983_3782910_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3782932_3783559_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3783657_3784608_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3784604_3785741_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3785794_3786571_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3786595_3787054_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3787193_3787835_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3787899_3789282_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_019247426.1|3789301_3790156_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3790314_3790926_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|3790935_3791385_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_010929719.1|3791903_3792044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|3792051_3792213_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_173651708.1|3792326_3792473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3792490_3793441_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP010845	Bordetella pertussis strain H561 chromosome, complete genome	4073006	3995179	4048609	4073006	transposase	Planktothrix_phage(40.0%)	45	NA	NA
WP_010931661.1|3995179_3996130_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|3996299_3997526_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|3997725_3998592_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|3998584_3999547_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|3999647_4000598_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4000696_4001647_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4001745_4002696_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4002692_4004186_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4004182_4007290_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4010349_4011600_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4011780_4012542_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4012574_4013225_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4013227_4014067_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4014307_4015051_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4015133_4015481_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4015578_4016421_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4016465_4017353_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4017379_4017568_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4017665_4019123_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4019109_4020636_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4020654_4021122_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4021121_4022144_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4022264_4022984_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4023059_4024160_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4024161_4025352_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4025471_4026488_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4026806_4027478_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4027474_4028383_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4028594_4029242_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4033093_4034170_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4034180_4034990_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4035079_4035853_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4035853_4036018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4036035_4036986_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4036874_4037897_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4037886_4039041_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4039080_4040493_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4040617_4041484_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4041485_4042310_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4042306_4043068_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4043148_4043835_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4044008_4045016_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4045012_4045792_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4045849_4047112_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4047658_4048609_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
