The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	27282	70035	4133777	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003814410.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010930208.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45199_45748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45719_45956_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46083_46977_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48146_49394_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49390_50005_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50140_51091_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51133_52390_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53621_54356_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54361_54952_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54976_55666_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55662_56424_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56503_57403_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57496_58447_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59247_60474_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60473_60887_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61076_62018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62441_63416_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63472_64054_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64066_64369_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64487_65546_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65580_66852_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67481_68663_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69084_70035_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	77633	123121	4133777	transposase,tRNA	Planktothrix_phage(25.0%)	44	NA	NA
WP_005012067.1|77633_78584_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78658_79603_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79599_81474_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82821_83526_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83522_84629_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84890_85484_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85480_86668_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86730_87990_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88013_89102_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89109_90210_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90213_90789_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90792_91845_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91975_92983_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92984_94271_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94287_94443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94467_95271_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95267_96134_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96208_97339_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97338_98178_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99110_99713_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99742_100396_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100528_101785_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101832_102732_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102807_103083_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103090_103753_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103814_104816_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104830_105379_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105436_106333_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106329_107391_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107426_108377_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109276_110470_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110551_111181_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111242_111926_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111935_113618_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113905_114253_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114343_114661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929632.1|114943_115960_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116035_116836_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116832_117708_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117718_119011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119053_120094_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120199_121021_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121121_122072_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|122170_123121_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	165924	226435	4133777	protease,transposase,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|165924_166875_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168318_169221_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169198_169828_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170110_171541_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171574_172204_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172252_173860_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173884_174568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174649_175126_-	bacterioferritin	NA	NA	NA	NA	NA
WP_005012067.1|175332_176283_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177398_177926_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178017_178833_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178893_179628_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179665_181744_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|181993_182266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182367_183453_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183456_185361_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|185357_189032_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189092_189656_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189663_190086_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|190113_190533_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|190561_191035_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|191134_191632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191786_194057_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|194105_195338_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|195436_196387_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|196489_197125_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_010929674.1|197121_198015_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198409_199510_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199591_199966_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200025_202890_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203034_203775_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203844_205056_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205084_206053_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005013747.1|206666_207617_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207773_208097_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208201_209242_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|209247_210027_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210072_210369_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210394_210670_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210726_211371_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211370_212057_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|212186_213038_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213088_213814_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213845_215195_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215306_216239_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|216696_219492_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|220085_223028_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223099_223819_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223857_224406_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224560_225460_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225484_226435_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	234367	291758	4133777	transposase,tRNA	Bacillus_phage(25.0%)	52	NA	NA
WP_005012067.1|234367_235318_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930730.1|235437_236388_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929729.1|237138_237843_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|237836_238631_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|238627_239593_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|239596_240517_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|240613_241777_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|241999_242890_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|242893_243397_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|243439_244438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|244434_245385_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|245576_245864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|245952_246903_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|246962_247523_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|249025_249907_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|250020_251223_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|251351_253211_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|253288_254098_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|254168_255170_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|255201_256062_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|256261_257266_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|257262_258849_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|258857_259784_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|259806_260433_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|260531_261482_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|261478_262615_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|262668_263445_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|263469_263928_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|264067_264709_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|264773_266156_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_019247426.1|266175_267030_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|267188_267800_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|268776_268917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|268924_269086_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|269363_270314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929717.1|271357_271636_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010929716.1|272778_273327_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929715.1|273389_275069_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929714.1|275065_276817_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_003817696.1|276813_276939_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_004567834.1|276952_278107_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_010929713.1|278122_279742_-	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010929712.1|279825_280371_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|280930_281881_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929711.1|282611_283592_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929710.1|283605_284730_+	CoA transferase	NA	NA	NA	NA	NA
WP_003814321.1|284737_286492_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929709.1|286598_287498_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814324.1|287562_288546_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929708.1|288681_289662_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929707.1|289678_291070_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929706.1|291221_291758_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
>prophage 5
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	356083	415552	4133777	transposase,tRNA	Streptococcus_phage(50.0%)	56	NA	NA
WP_005012067.1|356083_357034_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929759.1|357145_357868_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815420.1|357966_358710_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010929760.1|358940_360449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815418.1|360568_361300_+	iron-containing redox enzyme family protein	NA	NA	NA	NA	NA
WP_010929761.1|361344_362805_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929762.1|362829_363309_+	heme-binding protein	NA	NA	NA	NA	NA
WP_003817846.1|363327_364338_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929763.1|364552_365293_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929764.1|365499_366474_+	beta-propeller fold lactonase family protein	NA	NA	NA	NA	NA
WP_010929765.1|366470_367421_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929766.1|368469_369108_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_010929767.1|369144_370488_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_010929768.1|370910_371699_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	25.7	1.2e-19
WP_010929769.1|371836_372511_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010929770.1|372624_374079_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_010929771.1|374081_375620_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_010929772.1|375622_375931_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_003815204.1|376161_377205_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_010929773.1|377293_378178_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_003815202.1|378164_378728_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_003815201.1|378741_380694_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_003815198.1|380690_381827_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_010929775.1|381852_382908_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929776.1|382918_384412_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
WP_010927138.1|384624_385200_-	nucleoid occlusion factor SlmA	NA	NA	NA	NA	NA
WP_010929777.1|385249_385996_-	pyrimidine 5'-nucleotidase	NA	NA	NA	NA	NA
WP_010929778.1|385995_386898_-	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_010929779.1|387159_387948_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815191.1|388088_388580_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_003815190.1|388576_389320_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_033446211.1|389316_389910_-	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	34.8	5.6e-17
WP_100208326.1|389918_390395_-	YraN family protein	NA	NA	NA	NA	NA
WP_010929780.1|390519_391458_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_010929781.1|391454_392027_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.5	3.2e-25
WP_005012067.1|392023_392974_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|393110_394028_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|394024_394273_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|394269_395475_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|395547_396543_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|396565_397786_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|397782_398427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929483.1|400157_400967_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|401295_402246_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486048.1|402320_403274_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|403372_404356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|404282_404984_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|405032_405803_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|405799_406978_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|407145_408852_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|408848_409745_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|409785_411375_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|411424_412417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|412485_413085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|413545_414526_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|414601_415552_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	423363	478337	4133777	transposase	Bradyrhizobium_phage(20.0%)	44	NA	NA
WP_022997984.1|423363_424341_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|424536_425742_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|425738_427250_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|427265_428579_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|428769_428949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|429358_430093_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|432537_433488_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|433619_434018_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|434428_434899_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|434987_435332_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|435431_436832_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|438620_439139_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|439249_440005_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|440200_441433_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|441425_442211_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|442277_443249_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|443259_444237_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|444362_445535_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|445561_446590_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|446655_447849_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|449630_450581_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929794.1|450679_451585_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929795.1|451760_451964_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	5.8e-14
WP_010929796.1|452474_452915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929797.1|452944_453604_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019248869.1|453689_455306_-	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929799.1|455326_456790_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929800.1|456820_460207_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929801.1|460348_460753_-	RidA family protein	NA	NA	NA	NA	NA
WP_010929802.1|460896_461883_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247316.1|461869_462151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929803.1|462896_464129_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929804.1|464128_464623_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929805.1|464754_465717_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929806.1|465694_466948_-	CoA transferase	NA	NA	NA	NA	NA
WP_005013747.1|467069_468020_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003821340.1|468016_468679_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_010929831.1|468686_469646_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_010929830.1|469802_470474_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_023853155.1|470476_471442_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_010929828.1|471949_475078_+	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_010929827.1|475153_476221_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|476337_477288_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|477386_478337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	514011	549734	4133777	integrase,transposase	Bacillus_virus(11.11%)	34	508491:508508	553131:553148
508491:508508	attL	ACGGTGGCCAGCACGCTG	NA	NA	NA	NA
WP_005012067.1|514011_514962_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|514985_516044_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|516118_516493_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|517047_517998_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|519554_520400_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|520487_521651_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|522069_523041_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|523079_524507_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|524626_525418_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|525536_527990_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|528084_529194_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|529196_530606_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|531011_531146_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|531241_531613_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|531609_531882_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|531930_533622_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|533852_534803_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929840.1|535260_536184_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814626.1|536192_536591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929841.1|536832_538803_+	DUF3220 domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|540289_541279_+|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010926403.1|541275_541476_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929845.1|541588_541930_-	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_041166319.1|541940_543125_-	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929847.1|543161_543689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929848.1|543746_544394_-	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929849.1|544390_545377_-	recombinase RecT	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010926410.1|545380_545563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926411.1|545559_545937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929850.1|546170_546638_-	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_005013747.1|546673_547624_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010926414.1|547722_547965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929852.1|548131_548773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|548783_549734_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
553131:553148	attR	ACGGTGGCCAGCACGCTG	NA	NA	NA	NA
>prophage 8
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	715066	832958	4133777	transposase,tRNA	Acinetobacter_phage(22.22%)	102	NA	NA
WP_005012067.1|715066_716017_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929956.1|716115_717066_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|717788_719063_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|719149_720232_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|720242_721055_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|721091_721418_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|721422_721983_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|722223_723216_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|723234_724230_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|724245_725622_+	FAD binding domain-containing protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|725614_727996_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|728012_728402_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|728528_728759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|728863_729814_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|729912_730863_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|730859_731732_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|732662_733949_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|734002_734929_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|734947_735403_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_003815177.1|736254_737046_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|737077_737698_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|737694_738324_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|738336_738945_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|738941_739931_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|740036_741251_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|743202_744153_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|745586_746873_+	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929971.1|747038_747347_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_003807035.1|747347_748013_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_003807038.1|748053_749844_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|749956_750817_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_010929973.1|750813_752019_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|752015_752900_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|754416_754851_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_039249767.1|754813_755812_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|755923_757069_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|757143_758472_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|758505_759096_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|759385_760180_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|761349_762084_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|762090_762957_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|762964_764740_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|764782_765280_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|765576_766527_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|766625_767576_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|767916_768867_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|771190_772339_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003817794.1|772383_773046_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|773159_774152_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|774148_774886_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815315.1|774965_775787_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|775875_776739_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|776865_777102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|779076_780111_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003817805.1|780169_781147_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|781154_782075_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|782071_783772_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|783774_784680_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|784723_785857_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|785985_786936_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|787034_789104_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|789146_791249_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|791555_792632_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|792707_793592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|793774_794197_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|794206_795607_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|795649_796555_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|796653_798195_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|798229_798769_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|798781_799252_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|799389_799632_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|799748_800630_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|800702_801023_-	ATP synthase subunit I	NA	NA	NA	NA	NA
WP_014905645.1|801874_802825_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|804148_804925_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|804959_806732_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|806733_807636_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|807760_808120_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|808151_809114_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|809212_810163_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|810175_811111_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|811170_812010_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|812006_813176_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_014486104.1|813172_814462_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|814504_814879_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|814984_815722_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|815729_816434_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|816697_818218_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|818273_818837_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|818855_819887_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|819883_820672_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|820692_820851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905441.1|820847_821837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|823590_824541_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|825763_826666_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|826667_827522_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|827568_828678_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|828688_829207_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|829236_829869_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|829940_830600_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|830596_831817_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|832085_832958_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 9
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	837372	901204	4133777	transposase,tRNA	Pandoravirus(12.5%)	48	NA	NA
WP_010929632.1|837372_838389_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|838660_839287_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|839342_840470_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|840475_846193_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|846760_847705_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|847893_848829_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|848946_850518_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|850597_851806_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|852303_853221_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|855581_855803_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010931363.1|856133_857150_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|857234_857486_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|857489_858305_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|858417_859296_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|859407_861171_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|861286_862627_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931360.1|862623_863679_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_010927010.1|863695_865120_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|865119_865821_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_077070462.1|867325_868276_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|868371_869343_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|869347_870028_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|870165_870558_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010930525.1|870665_871682_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|871921_872707_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|872801_874211_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|874221_875022_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|875042_875813_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|875855_876323_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|876319_877270_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|879218_880097_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|881023_884002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|884355_885306_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|885302_886391_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|886426_887290_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|888429_888819_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|888822_889605_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|889638_890424_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|890699_891839_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|891835_892627_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|892623_893373_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|893369_894242_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|894241_895243_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|895239_896403_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|896428_897112_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931345.1|897065_898400_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|898392_899487_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|900253_901204_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	920115	996439	4133777	protease,integrase,transposase,tRNA	Bacillus_phage(20.0%)	60	967252:967270	987140:987158
WP_010929956.1|920115_921066_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|921164_922640_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|924227_925115_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|925117_926059_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|926104_927670_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|929447_930773_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|930955_932413_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|932376_932874_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|932904_933876_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_003808444.1|933928_934366_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|934489_935158_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|935886_936990_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_171024626.1|937092_938370_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|938381_939407_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|939408_940779_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931324.1|940779_941916_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|941962_943888_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|943884_945006_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931321.1|945002_946157_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_010931320.1|946153_947284_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|947291_948857_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|948863_950246_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|950524_951136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|951227_952643_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|952660_953371_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|953367_954690_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|954769_956731_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|956856_958170_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|958278_959577_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|959759_960668_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|960677_960887_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|960898_962578_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|962679_963633_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|963723_964551_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|964549_966436_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|966432_967032_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|967080_967980_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
967252:967270	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|968188_969139_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|969261_969876_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|970004_970601_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|970597_971380_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|971452_972544_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|972823_973951_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|974292_975339_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|975486_978606_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|978607_981559_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|981574_982786_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|982969_983920_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|983936_984431_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|984434_984692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248155.1|985235_986147_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|986228_986513_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|987296_988247_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
987140:987158	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_003814139.1|988440_989256_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931299.1|989388_990828_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814142.1|990841_991183_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931298.1|991237_992893_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814146.1|993044_994055_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814148.1|994187_994961_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|995488_996439_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	1006366	1052931	4133777	protease,holin,transposase,tRNA	Erwinia_phage(10.0%)	45	NA	NA
WP_005012808.1|1006366_1007317_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807159.1|1007415_1007976_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_003807161.1|1008400_1008706_+	copper-binding protein	NA	NA	NA	NA	NA
WP_003807162.1|1008719_1010054_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_010931291.1|1010075_1010615_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003807164.1|1010762_1011227_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_010931290.1|1011369_1012485_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_003807166.1|1012761_1013265_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_019248127.1|1013438_1013603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931288.1|1013593_1014316_+	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
WP_010931287.1|1014312_1015209_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_010931286.1|1015205_1016141_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247300.1|1016101_1016770_+	DUF1007 family protein	NA	NA	NA	NA	NA
WP_003818434.1|1016760_1017729_+	putative membrane protein	NA	NA	NA	NA	NA
WP_010931283.1|1017777_1019919_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_010931282.1|1019931_1020912_-	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
WP_010931281.1|1020926_1021619_-	DUF484 family protein	NA	NA	NA	NA	NA
WP_003807183.1|1021645_1022557_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_010931280.1|1022599_1023490_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010931279.1|1023486_1024341_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010925730.1|1024624_1025788_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.8	5.0e-126
WP_003818441.1|1025898_1026150_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_003807194.1|1026229_1027270_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_010931278.1|1027549_1028968_+	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
WP_010931277.1|1029038_1029374_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003807199.1|1029373_1030216_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_010931070.1|1030314_1031265_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818443.1|1031329_1032301_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818444.1|1032364_1033384_-	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003807204.1|1033385_1034759_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_010931276.1|1035036_1035717_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_023995440.1|1035729_1037856_+	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
WP_010931274.1|1037852_1038947_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_004566001.1|1038961_1040221_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931273.1|1040240_1041965_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
WP_003818450.1|1042203_1042956_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_010931070.1|1043094_1044045_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814620.1|1044485_1045391_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023853019.1|1045446_1047051_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_010931270.1|1047307_1048813_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_003820744.1|1048827_1049292_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_005012067.1|1049581_1050532_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820745.1|1050694_1051225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|1051224_1051536_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_005012808.1|1051980_1052931_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	1228825	1361506	4133777	transposase,tRNA	Bacillus_virus(20.0%)	121	NA	NA
WP_003813026.1|1228825_1229941_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_003813022.1|1230041_1230860_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010931185.1|1230957_1231569_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010931184.1|1231728_1233105_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	2.2e-109
WP_003813017.1|1233167_1233626_+	cytochrome c	NA	NA	NA	NA	NA
WP_003813013.1|1233710_1234406_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA	NA
WP_003813010.1|1234467_1234749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931182.1|1235311_1236064_+	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_003813006.1|1236108_1237185_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005012067.1|1237181_1238132_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1238234_1238897_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1238991_1239162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1239514_1240516_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1240518_1241715_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1241735_1242539_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1242619_1242916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1242946_1243510_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1243550_1244408_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1244415_1245165_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1245186_1246059_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1246087_1246867_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1246900_1247698_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1250352_1250745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1250738_1251599_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1251602_1252565_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1253341_1254031_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1254891_1255842_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1256191_1257061_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1257131_1257827_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1257816_1258326_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1258322_1259543_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1259490_1260393_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1261279_1262566_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1262604_1263978_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1264016_1264718_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1265016_1266006_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1266106_1266568_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1266583_1267132_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1267273_1268749_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1268854_1269946_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1269949_1270732_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1270741_1271530_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1272655_1273090_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1273086_1274097_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1274140_1275067_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1275353_1275722_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_010931070.1|1275938_1276889_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1276933_1279360_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1279408_1280101_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1280173_1281373_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1281390_1282296_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1282411_1283341_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1283366_1284713_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1284740_1285490_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1285503_1286286_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1286478_1287429_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1287490_1288600_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1289112_1289949_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1290018_1290984_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930176.1|1290980_1291931_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|1292316_1292859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1293894_1294845_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1295086_1295455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1295500_1296625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1297759_1298512_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1298603_1299224_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931154.1|1299225_1301334_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1301478_1302138_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1302169_1302634_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1302909_1303095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486088.1|1303146_1303899_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1303905_1305168_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003820806.1|1307525_1308653_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1308663_1309491_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1309477_1310344_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1311710_1312115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1312477_1313389_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1313403_1314114_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1314110_1315355_+	aconitase X catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1315356_1315791_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1315819_1316125_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1316223_1317174_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931145.1|1317230_1318385_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1318459_1319410_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1319941_1320739_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1320786_1321440_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1321396_1322485_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1322649_1324875_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1327152_1328049_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1328169_1329120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1329218_1330169_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852727.1|1330165_1331842_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	28.1	9.3e-33
WP_010931140.1|1331918_1333115_+	amidohydrolase	NA	NA	NA	NA	NA
WP_003814552.1|1333128_1334007_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929220.1|1334113_1335160_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
WP_003814554.1|1335223_1335634_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814555.1|1335644_1337117_+	magnesium transporter	NA	NA	NA	NA	NA
WP_010931139.1|1338259_1339411_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_003813114.1|1339558_1340569_-	acyltransferase family protein	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	24.6	3.6e-16
WP_010931138.1|1340739_1341705_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931137.1|1341840_1342710_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813109.1|1342796_1343063_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_003820295.1|1343067_1343979_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_010931136.1|1344028_1345891_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_003813103.1|1346047_1346845_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA	NA
WP_010926331.1|1347064_1347445_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_003813095.1|1347492_1347816_+	primosomal replication protein N	NA	NA	NA	NA	NA
WP_003813094.1|1347908_1348181_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_010931135.1|1348196_1348652_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_003813091.1|1348768_1349605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813089.1|1349601_1350975_+	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	58.2	4.0e-135
WP_010931134.1|1350995_1351964_-	bile acid:sodium symporter	NA	NA	NA	NA	NA
WP_003813085.1|1352043_1353021_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_003813082.1|1353125_1354805_-	PhoH family protein	NA	A0A2I7SAD7	Vibrio_phage	36.9	1.5e-70
WP_003813079.1|1354884_1355349_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003813077.1|1355351_1355804_-	Xcc1710-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931132.1|1356020_1357208_+	alanine transaminase	NA	NA	NA	NA	NA
WP_003813074.1|1357204_1358509_+	homoserine dehydrogenase	NA	NA	NA	NA	NA
WP_010931131.1|1358505_1359912_+	threonine synthase	NA	NA	NA	NA	NA
WP_003813070.1|1360125_1360347_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA	NA
WP_041166338.1|1360555_1361506_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	1365058	1430478	4133777	protease,transposase	uncultured_Mediterranean_phage(25.0%)	49	NA	NA
WP_005012067.1|1365058_1366009_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1366599_1367376_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1367493_1367757_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1367857_1368862_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1369062_1370664_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1370689_1371448_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1371539_1372196_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1372286_1373051_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1373060_1373249_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1373304_1374348_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1374344_1374758_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1374754_1375375_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010929591.1|1375655_1376606_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1376773_1378165_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1378237_1378816_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1378932_1380330_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1380445_1381651_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1381750_1382269_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1382363_1382609_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1382836_1383151_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1383240_1388430_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1388426_1390595_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1390650_1392966_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1392970_1394290_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931112.1|1394308_1395982_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1395986_1396655_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1396811_1400633_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_005015810.1|1400963_1401914_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1401935_1403081_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1403229_1404159_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1404155_1405244_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1405240_1406044_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1406040_1406772_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1406829_1408119_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1408215_1408818_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1413372_1413711_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1414418_1414685_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1416391_1417342_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1417338_1418670_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1419930_1421931_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1421923_1422565_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1422561_1422969_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1422965_1423766_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1423840_1424545_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1424576_1425371_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010929956.1|1425367_1426318_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1426416_1426851_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1426933_1429270_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1429461_1430478_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	1529665	1586875	4133777	transposase	Klosneuvirus(16.67%)	49	NA	NA
WP_005013747.1|1529665_1530616_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1534362_1534974_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1535196_1536657_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1536753_1538346_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1538699_1538957_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1538958_1540299_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1540394_1541084_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1541096_1542527_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1544251_1545073_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1545083_1546655_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1546683_1547661_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1547687_1548491_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1548487_1549282_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1549289_1550525_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1550517_1550952_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931031.1|1552224_1553952_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1554063_1555422_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_077070120.1|1555714_1556665_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1556763_1557714_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1557754_1558825_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1558847_1559726_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1559897_1560869_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1561031_1561874_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1562035_1562716_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1562709_1563879_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1563875_1564907_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1564950_1566192_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1566226_1567759_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1567839_1568463_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1568493_1569105_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1569140_1569611_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_033456131.1|1569800_1570034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248147.1|1570041_1571046_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1571082_1572597_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1572600_1573560_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1573588_1574392_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1574393_1576028_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1576111_1577173_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1577371_1577641_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1577644_1578169_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1578584_1579535_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1579531_1580566_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1580674_1581313_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1581607_1581835_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1581957_1582671_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931070.1|1582915_1583866_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1583969_1584251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1584365_1585814_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929584.1|1585924_1586875_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	1978540	2070507	4133777	transposase,tRNA	Moraxella_phage(25.0%)	60	NA	NA
WP_014905945.1|1978540_1979491_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810867.1|1979514_1979979_-	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_010930799.1|1980125_1981334_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_010930798.1|1981377_1981815_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930797.1|1981933_1983223_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1985963_1986914_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1987012_1987963_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930595.1|1988061_1989078_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_010930596.1|1989256_1990291_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_003811733.1|1990287_1990914_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930597.1|1990910_1991963_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_010930598.1|1992012_1992783_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930599.1|1992833_1993670_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930600.1|1993865_1994606_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930601.1|1994680_1995424_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699606.1|1996100_1996859_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	6.7e-31
WP_003811716.1|1997996_1999286_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_010930602.1|2000896_2002144_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930603.1|2002153_2003863_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_003811709.1|2003859_2004798_-	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_014486075.1|2004794_2006078_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010930604.1|2006081_2006564_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930605.1|2006564_2007551_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003811701.1|2007723_2008443_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2008559_2009510_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930606.1|2012695_2014045_+	amidase	NA	NA	NA	NA	NA
WP_010930607.1|2014102_2014897_+	putative hydro-lyase	NA	NA	NA	NA	NA
WP_003816497.1|2015030_2015906_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_014486076.1|2015949_2019666_-	virulence factors two-component system sensor histidine kinase BvgS	NA	A0A1V0SGX0	Hokovirus	32.0	4.2e-33
WP_010930609.1|2019674_2020304_-	virulence factors two-component system response regulator BvgA	NA	NA	NA	NA	NA
WP_010930610.1|2020730_2031503_+	filamentous hemagglutinin/adhesin	NA	A0A0R6PJK4	Moraxella_phage	32.5	3.6e-29
WP_010930611.1|2032265_2033000_+	molecular chaperone FimB	NA	NA	NA	NA	NA
WP_010930612.1|2033062_2035684_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_019247160.1|2035664_2036795_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_010930614.1|2036787_2038542_+	filamentous hemagglutinin transporter protein FhaC	NA	NA	NA	NA	NA
WP_010930615.1|2039855_2040356_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930616.1|2040362_2041337_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930617.1|2042893_2043385_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930618.1|2043398_2044364_-	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_019247163.1|2044384_2045086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930620.1|2046260_2046773_+	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_010930621.1|2046851_2050475_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930622.1|2050488_2051520_-	C45 family peptidase	NA	NA	NA	NA	NA
WP_003809983.1|2052679_2053513_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_010930623.1|2053526_2054285_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930624.1|2054446_2055439_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930625.1|2055656_2056433_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930626.1|2056540_2057323_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003809992.1|2057449_2059036_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	42.0	1.9e-35
WP_010930627.1|2059060_2059924_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_019247344.1|2060131_2060908_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_003809999.1|2060900_2061410_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_010930629.1|2061538_2062222_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930630.1|2062461_2063922_+|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	27.9	2.5e-34
WP_003820119.1|2063941_2064586_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_003810007.1|2064622_2065588_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_010930742.1|2065686_2066637_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930632.1|2066766_2067732_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_010930633.1|2067831_2069097_+	aspartate kinase	NA	NA	NA	NA	NA
WP_010929632.1|2069490_2070507_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2261180	2313371	4133777	transposase	Erysipelothrix_phage(33.33%)	45	NA	NA
WP_010930730.1|2261180_2262131_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2263001_2263874_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2263951_2265091_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2265449_2266706_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2266711_2267239_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2267243_2268062_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2268061_2268784_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2268805_2269120_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2269137_2270286_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2270316_2271192_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2271188_2272508_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2272580_2273777_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2273787_2275275_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2277869_2278769_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2278906_2279872_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2279970_2280921_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|2281142_2282093_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812024.1|2282089_2282392_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_003812026.1|2282551_2282956_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_010930743.1|2282948_2284175_+	NnrS family protein	NA	NA	NA	NA	NA
WP_003812030.1|2284171_2284618_+	membrane protein	NA	NA	NA	NA	NA
WP_003812032.1|2284687_2285470_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_010930744.1|2285511_2287017_+	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247851.1|2287302_2288136_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930745.1|2289573_2290395_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930746.1|2290413_2291268_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_003812044.1|2291271_2292243_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247855.1|2292927_2293104_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812172.1|2294628_2294925_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930747.1|2295099_2296452_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.4	8.5e-45
WP_010930153.1|2296594_2297611_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2299590_2300604_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2300690_2301596_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2301752_2302097_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2302254_2302713_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2302726_2304943_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2304939_2306001_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2306029_2307004_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2306955_2307774_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2307786_2308395_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2308569_2308965_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2308983_2310423_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2310451_2310799_+	GFA family protein	NA	NA	NA	NA	NA
WP_005012067.1|2310817_2311768_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2312420_2313371_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2339936	2384316	4133777	protease,transposase,tRNA	Staphylococcus_phage(12.5%)	42	NA	NA
WP_005012067.1|2339936_2340887_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930774.1|2341053_2342028_+	membrane protein	NA	NA	NA	NA	NA
WP_003810379.1|2342024_2342168_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_003810383.1|2343789_2344452_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003818560.1|2344454_2344631_+	cytochrome oxidase	NA	NA	NA	NA	NA
WP_010930775.1|2344627_2345566_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_010930776.1|2345657_2347148_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930777.1|2347233_2347386_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930778.1|2347399_2347639_+	membrane protein	NA	NA	NA	NA	NA
WP_010930779.1|2347734_2348478_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930780.1|2348510_2349011_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_170954295.1|2349073_2350033_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_003810400.1|2350029_2350791_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930782.1|2350806_2351892_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005013747.1|2352091_2353042_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2353001_2353415_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2353699_2353999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2354408_2356691_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2357156_2357351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2357376_2359407_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2359426_2359639_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2359916_2360456_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2360569_2361865_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2361941_2363099_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2363282_2364182_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2364200_2365505_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2365470_2366577_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2366664_2366901_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2367039_2368110_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2368113_2369469_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2369495_2370656_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2370658_2371297_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2371298_2372585_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2372643_2373939_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2373945_2374452_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2374448_2375597_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2375624_2376050_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2376372_2379255_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2379347_2380103_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2380868_2382218_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929577.1|2382316_2383267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2383365_2384316_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2419516	2476850	4133777	protease,transposase	Lake_Baikal_phage(25.0%)	51	NA	NA
WP_005012067.1|2419516_2420467_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2420667_2421477_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2421601_2422552_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2422548_2423442_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2423566_2423761_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2423760_2424102_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2424111_2425974_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2426103_2426616_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2426618_2426942_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2426943_2427354_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2427391_2428603_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2428620_2429133_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2429348_2429840_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2430092_2432129_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_010930567.1|2432206_2433409_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2433537_2434188_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_062826501.1|2435948_2436899_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2438315_2438528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248063.1|2438545_2439277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2439311_2439953_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2439945_2440614_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2442826_2443603_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2443624_2444782_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2444778_2445210_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2445206_2446010_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2446023_2446425_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2446491_2447463_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2447528_2448752_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2448979_2449930_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2450053_2452507_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2452695_2454000_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2454104_2454758_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2454760_2456071_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2456267_2456828_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2456939_2457140_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2457485_2458052_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2458135_2458339_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2458645_2458966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2459007_2459289_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2459363_2460620_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2461002_2461332_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2462902_2463724_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2463723_2464863_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_010930547.1|2464869_2465766_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2465762_2467688_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2468047_2470660_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2470712_2473013_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2473009_2474218_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2474479_2474854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931359.1|2474850_2475801_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2475899_2476850_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2479957	2547112	4133777	transposase,tRNA	Klosneuvirus(13.33%)	59	NA	NA
WP_010930542.1|2479957_2482819_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2482821_2483328_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2483432_2484641_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2484642_2485581_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2485742_2486216_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2486212_2487163_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2487273_2487714_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2487842_2489072_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2489110_2489932_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2489985_2491137_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2491228_2491717_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2494267_2496817_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2496887_2499461_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2499726_2499927_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2499958_2500120_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2500177_2500516_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2500664_2501615_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2502389_2503058_+	arylesterase	NA	NA	NA	NA	NA
WP_019247881.1|2503039_2505055_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_004568486.1|2505237_2505987_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2505999_2506863_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2506866_2508282_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2508415_2509144_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2509282_2509483_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2509658_2510057_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2510080_2511481_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2511599_2512352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930528.1|2512640_2513240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004568488.1|2513344_2514124_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2514120_2515005_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2515022_2515802_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2515786_2516545_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_003811015.1|2516670_2517318_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930525.1|2517585_2518602_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2518699_2519740_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2519874_2521167_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2522526_2522910_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2522927_2523515_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_010930522.1|2523552_2524503_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2525487_2526261_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2526257_2527256_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2527340_2528117_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2528272_2529877_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2530257_2531382_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2531508_2532132_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2532128_2534030_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2534078_2534873_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2534885_2535887_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_004568494.1|2535883_2536390_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2536382_2537231_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2537328_2537871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2537914_2538865_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2539020_2539347_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2539343_2539628_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2539624_2540104_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2540100_2541729_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2541725_2542070_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2542069_2545003_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2546161_2547112_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2576721	2647875	4133777	transposase	Brazilian_cedratvirus(10.0%)	55	NA	NA
WP_005013747.1|2576721_2577672_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|2577730_2578504_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|2578496_2580053_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2580049_2581000_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|2582326_2582929_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|2583168_2583870_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|2583863_2584646_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|2584830_2585781_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|2585879_2586617_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|2586806_2587565_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|2587611_2588601_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|2588778_2589747_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|2591286_2592255_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|2592263_2593205_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2593678_2594689_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|2594679_2596194_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|2596190_2597537_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|2597539_2598574_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|2598623_2600249_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|2600801_2601752_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2601833_2603009_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2603022_2605080_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2605076_2606102_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2606113_2607403_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2607425_2608523_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2608519_2609410_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2609406_2611491_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2611522_2612692_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2612733_2613474_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2613473_2614244_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247171.1|2614568_2614736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930465.1|2615099_2615885_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2615911_2617996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2618163_2620119_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2620442_2620943_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2621041_2622568_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2622705_2623593_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2623607_2624561_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2624612_2626703_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2626718_2627105_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2629798_2630602_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2631895_2632798_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2632862_2633639_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2633960_2635010_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2635133_2636804_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2636808_2637603_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2637701_2638652_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2638671_2639577_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2639654_2640353_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2640512_2641457_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2641466_2642954_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2642953_2644021_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2644084_2645497_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2645682_2646903_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_010929584.1|2646924_2647875_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2733124	2798748	4133777	transposase,tRNA	Planktothrix_phage(33.33%)	59	NA	NA
WP_005012067.1|2733124_2734075_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2734173_2734944_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2734940_2735612_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2735608_2736250_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2736262_2737183_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2737343_2738504_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2738545_2739496_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_169507376.1|2740160_2740361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2740483_2742178_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2742299_2742569_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2742684_2743083_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2743093_2744050_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2744186_2744732_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2744752_2746702_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2747089_2747866_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2747871_2748264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2748685_2749636_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2749632_2750730_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2750761_2751712_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2752191_2752848_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2752862_2754530_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2754532_2755162_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2755373_2756468_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2756612_2757425_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2757428_2759132_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2759182_2760313_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2760499_2761576_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2761657_2762308_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2762322_2763726_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2764009_2764828_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2764824_2765529_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2766428_2767544_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2767577_2767952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2767974_2769132_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2769144_2769378_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2770012_2772982_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2772996_2773206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930374.1|2773357_2773987_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2773983_2776074_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2776097_2776778_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2776774_2777335_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2777341_2778439_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2778591_2779185_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2779181_2780474_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2780487_2781030_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2781039_2781876_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2781909_2782971_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2783012_2784065_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2784080_2784383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2784524_2785475_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930368.1|2785653_2787348_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2787344_2788430_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2788477_2789377_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2789387_2790032_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2791053_2794296_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2794306_2795461_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2795687_2796650_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2796748_2797699_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2797797_2798748_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	2850230	2916730	4133777	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2850230_2851181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2851550_2852123_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2852125_2853136_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2853128_2853629_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2853639_2853981_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2853992_2854784_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2854800_2855070_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2855092_2855881_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2855927_2856944_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2857160_2858603_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2858781_2860401_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2860521_2862342_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2862420_2863953_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2863986_2865633_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2865702_2866725_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2866742_2867876_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2867878_2868568_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2868567_2869353_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2869396_2870161_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2870199_2871621_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2871686_2872391_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2872438_2872858_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2872870_2873278_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2873461_2874172_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2874298_2874589_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2874606_2875089_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2879594_2880749_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010930320.1|2881054_2882071_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2882317_2883106_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2883172_2883853_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2883849_2884620_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2884718_2885669_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2885724_2886642_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2886652_2887831_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2887850_2888846_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2890434_2891043_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2891030_2892071_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2892088_2893051_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2893047_2894241_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2894237_2895035_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2895060_2896047_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2896065_2898105_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2898306_2898987_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2899000_2899912_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2899908_2900487_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2900625_2901531_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2901538_2904958_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2904945_2907546_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2908501_2909134_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2909527_2910286_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2910282_2911485_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2911672_2912623_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2913530_2914676_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2914662_2915418_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2915534_2915714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2915779_2916730_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	3079295	3147713	4133777	transposase,tRNA	Oenococcus_phage(33.33%)	54	NA	NA
WP_005012067.1|3079295_3080246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930231.1|3080448_3081438_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930230.1|3081521_3081875_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930229.1|3081952_3082561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811662.1|3084234_3084813_-	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_003811660.1|3084837_3085791_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930228.1|3085830_3086748_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033446252.1|3086869_3087796_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930226.1|3087803_3088550_-	aldolase	NA	NA	NA	NA	NA
WP_010930225.1|3088876_3089818_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930224.1|3090044_3091742_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930223.1|3092176_3093598_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930222.1|3093751_3094531_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247966.1|3094655_3095534_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930220.1|3095639_3096764_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_003811636.1|3096809_3097772_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930219.1|3097764_3098619_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811632.1|3098726_3099137_+	VOC family protein	NA	NA	NA	NA	NA
WP_005013747.1|3099133_3100084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|3100182_3101064_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|3101141_3102521_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|3102559_3103405_-	FTR1 family protein	NA	NA	NA	NA	NA
WP_003813580.1|3103420_3103765_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|3103767_3104304_-	iron transporter	NA	NA	NA	NA	NA
WP_003813585.1|3104476_3105052_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|3105154_3105892_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|3105959_3107597_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|3107704_3108460_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|3108447_3109410_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_003813594.1|3109511_3110312_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|3110373_3112449_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|3112613_3114989_+	RNA-binding transcriptional accessory protein Tex	NA	NA	NA	NA	NA
WP_010930211.1|3115069_3116425_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_005013747.1|3116434_3117385_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930210.1|3117533_3117860_-	DUF3325 domain-containing protein	NA	NA	NA	NA	NA
WP_003813607.1|3119504_3119813_-	DUF3649 domain-containing protein	NA	NA	NA	NA	NA
WP_003813609.1|3119929_3122407_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003813612.1|3122500_3123463_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010930209.1|3123455_3123989_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_010930208.1|3124710_3125661_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813618.1|3126128_3126851_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|3126905_3127889_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3128018_3128969_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|3128965_3129868_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|3129955_3130714_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|3130726_3131818_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|3131915_3133343_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|3133572_3134787_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|3134832_3137703_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|3140113_3140602_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|3140727_3143424_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|3143578_3145861_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|3146040_3146664_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|3146762_3147713_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	3169631	3281947	4133777	holin,transposase,tRNA	uncultured_Mediterranean_phage(17.65%)	100	NA	NA
WP_010930190.1|3169631_3171152_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|3171194_3171497_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|3171493_3172126_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|3172204_3174070_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|3174066_3174861_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|3174889_3176005_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|3176909_3177788_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|3177787_3178612_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_005012067.1|3178779_3179730_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|3179942_3182792_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|3182773_3183502_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930181.1|3183642_3185106_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|3185102_3185474_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|3185491_3186805_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|3186841_3187300_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3187412_3188363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|3188359_3189373_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|3189512_3190499_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|3190857_3191565_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|3192145_3193096_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|3193247_3193850_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|3193868_3194501_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|3194545_3194797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|3194738_3196625_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|3196643_3197486_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|3197482_3198841_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|3199061_3199856_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|3200086_3201580_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|3201815_3203897_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|3204091_3205132_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|3205266_3206283_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|3206304_3207162_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|3207206_3207983_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_005013747.1|3208350_3209301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3209399_3210350_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|3210376_3210841_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|3212047_3214336_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|3214452_3215325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|3215367_3216522_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|3216556_3217387_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|3217470_3219015_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|3219057_3219417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|3219418_3219832_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|3219872_3220190_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|3220274_3220991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|3221254_3222676_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_010930159.1|3222742_3225475_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|3225807_3226824_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|3227159_3227801_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|3227891_3229328_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3229485_3230559_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3230555_3231692_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_005012808.1|3231790_3232741_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809416.1|3232885_3233230_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|3233296_3235177_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|3235226_3236162_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930525.1|3236493_3237510_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3238447_3239875_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3239871_3240894_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3240883_3241357_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|3241497_3242385_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3242381_3244025_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|3244021_3245071_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930525.1|3245859_3246876_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|3246975_3247608_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|3247616_3248006_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3248058_3249111_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|3249974_3251681_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|3251754_3252255_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3252269_3254327_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3254353_3254647_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3254748_3255696_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3255708_3256584_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3256704_3257265_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3257299_3257623_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3258058_3258796_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3259094_3260045_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3260288_3260552_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3260625_3260907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3260923_3261784_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3261780_3262116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3262169_3262820_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_010930140.1|3263004_3264480_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_019247197.1|3264500_3265445_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3265490_3265808_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3265810_3266749_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3266926_3267412_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3267430_3267979_+	DinB family protein	NA	NA	NA	NA	NA
WP_023994624.1|3268010_3268163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853531.1|3268255_3269389_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930137.1|3269492_3270134_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3270288_3272637_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3272633_3273572_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3273597_3274788_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3274784_3275558_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3275587_3276781_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3276898_3277909_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3277926_3279963_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3280157_3280898_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_005012808.1|3280996_3281947_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	3393795	3463474	4133777	holin,transposase	Bacillus_phage(20.0%)	58	NA	NA
WP_010929591.1|3393795_3394746_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3395922_3397293_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3397325_3398117_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3398129_3399185_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3399210_3400086_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3400191_3400440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3400474_3401929_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3401925_3402447_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3402475_3403828_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010930056.1|3409092_3410394_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3410408_3411125_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3411406_3412087_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3412098_3412266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3412374_3412521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3412614_3413274_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3413672_3415505_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3415501_3416452_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930050.1|3416550_3417207_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930049.1|3417354_3420063_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_003813068.1|3420072_3421092_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930048.1|3421088_3422039_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813893.1|3422137_3422626_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_003813895.1|3422622_3423306_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010926959.1|3423335_3426791_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_010930046.1|3426826_3427687_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_010930045.1|3427815_3428733_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930044.1|3428870_3429851_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813904.1|3429910_3431701_+	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	2.0e-25
WP_010930042.1|3431697_3432474_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930041.1|3432483_3433002_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003813909.1|3433114_3435385_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010930039.1|3435596_3437828_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003813915.1|3438128_3438458_-	DUF2818 family protein	NA	NA	NA	NA	NA
WP_003813916.1|3438474_3439959_-	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
WP_019247436.1|3439969_3441472_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
WP_010930037.1|3441468_3443481_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
WP_003813920.1|3443498_3443807_-	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
WP_003813921.1|3443803_3444451_-	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
WP_003813924.1|3444468_3444957_-	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA	NA
WP_003813926.1|3444978_3446052_-	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA	NA
WP_010930036.1|3446051_3448379_-	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
WP_003813930.1|3448394_3449762_-	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA	NA
WP_003813932.1|3449758_3450253_-	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
WP_010930035.1|3450298_3451555_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
WP_010926963.1|3451557_3452181_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
WP_003813941.1|3452255_3452732_-	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
WP_003813943.1|3452768_3453128_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
WP_010930034.1|3453316_3454474_-	porin	NA	NA	NA	NA	NA
WP_005012067.1|3454786_3455737_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|3455754_3456309_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|3456310_3456745_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|3456741_3457176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|3457159_3457963_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|3457979_3458795_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_020699608.1|3458791_3459607_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|3459753_3460455_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|3460482_3462441_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|3462523_3463474_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	3566206	3609113	4133777	transposase	Planktothrix_phage(50.0%)	34	NA	NA
WP_005012808.1|3566206_3567157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3567258_3567687_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3567759_3569955_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3570176_3571127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3571086_3571611_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3571742_3572714_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3572833_3575278_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3575293_3575884_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3576127_3577078_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3577235_3578501_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3578534_3579632_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3580286_3581237_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814459.1|3581237_3581807_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929980.1|3581874_3582690_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929979.1|3582856_3584476_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929978.1|3584554_3585496_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929977.1|3585495_3586380_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010927038.1|3586383_3588036_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929976.1|3588075_3589473_+	amidase family protein	NA	NA	NA	NA	NA
WP_010929975.1|3589514_3590894_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_003814443.1|3590933_3591152_-	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_003814441.1|3591492_3592365_+	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_005012067.1|3592524_3593475_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3594206_3594584_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3594568_3595270_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3595413_3596106_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3596105_3597209_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3597318_3599691_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3599687_3601247_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3601271_3602069_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3602100_3603246_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3603350_3604793_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3604795_3606025_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3608162_3609113_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	3618405	3651088	4133777	tail,terminase,transposase,tRNA	uncultured_Caudovirales_phage(21.05%)	40	NA	NA
WP_003814636.1|3618405_3620136_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3620201_3620774_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3620754_3621441_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3621796_3622468_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3622796_3623018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3623017_3623299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3623295_3623811_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3623810_3624362_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3624340_3624583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3624587_3625400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3625399_3625663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3625703_3625901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3625881_3626298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3626302_3630259_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3630251_3630641_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3630637_3631171_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3631238_3631598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3631607_3634220_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3634245_3634536_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3634553_3634883_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3634892_3635411_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3635665_3636166_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3636173_3636596_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3636592_3636991_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3636987_3637383_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_162096760.1|3637382_3637571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3637584_3638067_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3638129_3638381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931443.1|3640434_3641037_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3641159_3641402_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3641407_3642463_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3642491_3643910_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3643912_3645190_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3645176_3645662_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3646301_3647252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633094.1|3647508_3648198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3648190_3648442_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3648996_3649608_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3649679_3649886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3650137_3651088_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010963	Bordetella pertussis strain C393 chromosome, complete genome	4133777	3658185	3708626	4133777	protease,transposase,tRNA	Bacillus_phage(50.0%)	47	NA	NA
WP_010931459.1|3658185_3659703_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|3659778_3660618_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|3660639_3661521_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|3661602_3662697_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|3662990_3663941_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|3664015_3664957_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814209.1|3665040_3665400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931461.1|3665781_3666819_-	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_010931462.1|3667135_3668476_+	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931463.1|3668485_3668938_-	membrane protein	NA	NA	NA	NA	NA
WP_003814217.1|3669034_3670216_+	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_023995141.1|3670281_3671307_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|3671347_3671587_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|3671656_3673246_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|3673245_3673794_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|3673874_3674447_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|3674465_3675377_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|3675450_3676419_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|3676541_3677615_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|3677619_3679440_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_005015810.1|3679516_3680467_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|3680555_3680891_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|3681024_3681675_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|3681696_3683115_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|3683184_3683940_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|3683908_3684667_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|3684677_3685559_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|3685575_3686283_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|3686285_3687044_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|3687253_3688996_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|3688988_3689513_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|3689552_3690347_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|3690514_3691588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015810.1|3691686_3692637_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931477.1|3692692_3693505_+	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_003814178.1|3693663_3694512_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931478.1|3694712_3699107_+	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_010931479.1|3699200_3700178_-	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_003814172.1|3700564_3701143_+	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931480.1|3701290_3702340_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814165.1|3702380_3703115_-	arginyltransferase	NA	NA	NA	NA	NA
WP_010931481.1|3703909_3704491_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814158.1|3704487_3705381_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820995.1|3705514_3705916_+	DoxX family protein	NA	NA	NA	NA	NA
WP_010927005.1|3705933_3706536_-	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003814152.1|3706593_3706977_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|3707675_3708626_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
