The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	27282	70036	4106666	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	77634	136108	4106666	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	164892	225403	4106666	protease,transposase,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_010930800.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184325_188000_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189529_190003_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193073_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|194404_195355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195457_196093_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197377_198478_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198559_198934_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198993_201858_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202812_204024_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_076879634.1|205634_206585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206741_207065_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207169_208210_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208215_208995_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209040_209337_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209362_209638_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210338_211025_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211154_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212056_212782_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214274_215207_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215664_218460_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219053_221996_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222825_223374_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224452_225403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	233336	286924	4106666	protease,transposase,tRNA	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235320_236271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238116_238527_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240335_241379_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241549_243652_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251623_253513_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253599_254238_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254380_255766_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265573_266524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274127_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277140_278091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278108_278255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278537_278678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279655_280267_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280425_281280_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281299_282682_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284840_285977_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285973_286924_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	390857	448366	4106666	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390857_391808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391944_392862_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392858_393107_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393103_394309_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394381_395377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395399_396620_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396616_397261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398991_399801_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400105_401059_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401157_402141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403584_404763_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404930_406637_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407570_409160_-	rhodanese homology domain-containing protein	NA	NA	NA	NA	NA
WP_003807867.1|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410270_410870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411330_412311_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412386_413337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413425_414340_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414336_414996_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415085_416009_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416014_416470_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417528_417798_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|417757_419377_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419373_420432_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421148_422126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423523_425035_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425050_426364_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426554_426734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427143_427878_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430322_431273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431404_431803_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432213_432684_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432772_433117_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433216_434617_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436405_436924_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437034_437790_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437985_439218_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439210_439996_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440062_441034_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441044_442022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442147_443320_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|443346_444375_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444440_445634_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447415_448366_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	590420	651610	4106666	protease,transposase	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|590420_591371_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|591867_592737_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592733_593555_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593753_594245_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594263_595337_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595383_596487_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596562_597183_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597203_597713_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597767_598019_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598082_599216_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599223_599610_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|599606_602126_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602554_602893_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602889_603396_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603457_604258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604368_605310_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605403_606939_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608618_610469_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610472_611306_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611305_612247_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|612498_613470_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613611_615900_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616206_617115_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617169_618135_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618209_619871_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|619942_620653_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|620619_620784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|620801_621752_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622450_622834_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622891_623494_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623511_623913_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|624046_624940_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624936_625518_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626312_627047_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627087_628137_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628284_628863_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629249_630227_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630320_634715_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634915_635764_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635922_636735_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636790_637741_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|637839_638640_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638701_639085_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|639096_640530_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|640736_641066_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|641068_641818_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|642000_642921_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642967_643180_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643202_643625_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|643641_644742_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644838_646356_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646431_647271_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|647292_648174_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648255_649350_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649643_650594_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650668_651610_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	656934	703125	4106666	tail,transposase,tRNA,terminase	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|656934_657960_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|658000_658240_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658309_659899_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659898_660447_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660527_661100_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661118_662030_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662103_663072_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663194_664268_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664272_666093_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|666169_667120_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|667208_667544_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667677_668328_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668349_669768_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669837_670593_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670561_671320_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671330_672212_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672228_672936_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672938_673697_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673906_675649_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675641_676166_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676205_677000_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677167_678241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678339_679290_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|679541_679748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679819_680431_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|680985_681237_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|681229_681919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|681936_682158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682175_683126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|683765_684251_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|684237_685515_+|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685517_686936_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686964_688020_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688025_688268_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688390_688993_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|689421_690372_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|691046_691298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|691360_691843_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|691844_692045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|692044_692440_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|692436_692835_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|692831_693254_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|693261_693762_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|694016_694535_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|694544_694874_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|694891_695182_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|695207_697820_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|697829_698189_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|698256_698790_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|698786_699176_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|699168_703125_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	709291	763221	4106666	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|709291_711022_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|711074_711503_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|711505_712186_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|712185_712644_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|712680_713655_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|713671_714988_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|715019_715517_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|715603_716293_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|716292_717342_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|717338_718133_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|718301_718652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|718627_719185_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|720314_721265_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|723402_724632_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|724634_726077_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|726181_727327_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|727358_728156_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|728180_729740_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|729736_732109_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|732218_733322_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|733321_734014_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|734157_734859_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|734843_735221_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|735952_736903_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|737062_737935_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|738275_738494_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|738533_739913_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|739954_741352_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|741391_743044_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|743047_743932_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|743931_744873_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|744951_746571_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|746737_747553_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|747620_748190_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|748190_749141_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|749795_750893_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|750926_752192_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|752349_753300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|753543_754134_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|754149_756594_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|756713_757685_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|757816_758341_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|758300_759251_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|759472_761668_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|761740_762169_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|762270_763221_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	854099	903363	4106666	holin,transposase	Vibrio_phage(33.33%)	40	NA	NA
WP_010929591.1|854099_855050_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|855067_855622_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|855623_856058_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|856054_856489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|856472_857276_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|857292_858108_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_019248500.1|858104_858920_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|859066_859768_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|859795_861754_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_010931070.1|861836_862787_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|863007_863676_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|863799_864906_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|864918_868032_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|868028_869522_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|869536_870208_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|870251_870746_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|870886_871534_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|871637_873686_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|873682_875695_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|875720_877055_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|877163_878156_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|878222_880307_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|880331_881303_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|881431_882463_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|882466_883618_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|883788_884712_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|884789_885614_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|885810_886827_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|887023_888007_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|889605_890994_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|891024_892014_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|892124_893357_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|893638_894439_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|894461_896693_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|897480_897927_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|897948_898695_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|898838_899816_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|900449_901061_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|901054_902272_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|902412_903363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	912975	977915	4106666	transposase	Bacillus_phage(18.18%)	58	NA	NA
WP_005012067.1|912975_913926_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|913922_915755_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|916153_916813_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|916906_917053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|917161_917329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|917340_918021_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|918302_919019_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|919033_920335_-	phospholipase A	NA	NA	NA	NA	NA
WP_029444137.1|922479_925368_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|925591_926944_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|926972_927494_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|927490_928945_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|928979_929228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|929333_930209_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|930234_931290_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|931302_932094_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|932126_933497_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|934673_935624_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935676_935898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936057_936270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936389_937508_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|938013_938265_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938377_939328_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|939324_939708_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|939762_941577_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|941726_942554_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|942599_943580_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|943576_943789_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|943785_944967_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|945130_945865_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|945866_948479_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|948614_950528_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|951143_951554_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|951651_952737_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|952835_953786_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|953782_954757_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|954881_955793_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|956069_956462_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|956591_957542_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|957571_957754_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|958526_959708_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|959923_960601_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|960597_961323_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|961448_962030_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|962400_965082_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|965081_966215_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|966207_967293_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|967379_968279_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|968275_969604_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|969618_970290_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|970477_972193_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|972194_972554_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|972745_973060_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|973102_974323_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|974319_975261_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|975257_976247_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|976281_976866_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|976964_977915_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	997315	1048280	4106666	transposase	Enterococcus_phage(25.0%)	42	NA	NA
WP_005012067.1|997315_998266_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|998370_999420_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|999557_1000574_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1002082_1002655_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1002714_1003446_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1003497_1004415_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1005222_1008402_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1008398_1009781_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1009850_1010102_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1010247_1010862_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1011048_1013163_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1013238_1014090_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1014086_1014713_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1014709_1016464_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1016756_1019462_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1019474_1021136_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1021148_1022939_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1023160_1024336_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1024378_1025329_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1025427_1026168_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1026362_1028399_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1028416_1029427_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1029544_1030738_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1030767_1031541_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1031537_1032728_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1032753_1033692_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1033688_1036037_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1036191_1036833_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1036936_1038070_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1038162_1038315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1038346_1038895_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1038913_1039399_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1039576_1040515_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1040517_1040835_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1040880_1041825_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1043505_1044156_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1044209_1044545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1044541_1045402_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1045418_1045700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1045773_1046037_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1046280_1047231_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930198.1|1047329_1048280_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	1060498	1118161	4106666	holin,protease,transposase,tRNA	uncultured_Mediterranean_phage(37.5%)	49	NA	NA
WP_010931363.1|1060498_1061515_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930148.1|1062303_1063353_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1063349_1064993_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1064989_1065877_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1066017_1066491_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1066480_1067503_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1067499_1068927_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1069864_1070881_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1071213_1072149_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1072198_1074079_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1074145_1074490_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1074634_1075771_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1075767_1076841_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1076998_1078435_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1078525_1079167_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1079502_1080519_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_077598830.1|1080618_1081194_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_019248433.1|1081132_1083880_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1083946_1085368_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1085631_1086348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1086432_1086750_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1086790_1087204_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1087205_1087565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1087607_1089152_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1089235_1090066_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1090100_1091255_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1091297_1092170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1092286_1094575_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1095781_1096246_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1096272_1097223_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1097240_1097378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1097590_1098367_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098411_1099269_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099290_1100307_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100441_1101482_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101676_1103758_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103993_1105487_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105717_1106512_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106732_1108091_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1108087_1108930_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108948_1110835_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1110776_1111028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1111072_1111705_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111723_1112326_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1112477_1113428_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1114008_1114716_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1115074_1116061_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1116200_1117214_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1117210_1118161_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	1318232	1386719	4106666	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1318232_1319183_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1319951_1320590_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1321479_1321926_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_010930284.1|1322007_1322709_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1322709_1323477_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1323473_1324712_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1324711_1325638_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1325740_1326856_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1326871_1327822_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1328175_1328757_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1328753_1329587_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1329797_1331111_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1331287_1332169_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1332188_1333040_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1333092_1334181_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1334291_1335419_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1335653_1336265_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1336363_1337314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1337535_1337913_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1338060_1338558_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1338554_1339082_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1339215_1340031_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930292.1|1340043_1341225_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1341272_1342166_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1342292_1342763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1342888_1343716_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1343744_1344521_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1344517_1344793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1344807_1345272_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1345283_1345985_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|1346094_1346595_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1346677_1347856_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1349483_1349819_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1350006_1351455_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1351512_1351857_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1351963_1352503_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1352595_1353546_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999972.1|1353563_1353803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1354284_1354716_-	YXWGXW repeat-containing protein	NA	NA	NA	NA	NA
WP_010930300.1|1354897_1355302_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1356538_1356862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1356864_1357752_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1357784_1358210_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1358281_1358635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1358874_1359381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1359419_1360751_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1360810_1361626_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1361622_1362477_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1365539_1368083_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1369449_1371204_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1371200_1373321_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1373325_1375521_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1375517_1378859_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1381661_1382612_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1382677_1382857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1382973_1383729_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1383715_1384861_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1385768_1386719_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	1447210	1502697	4106666	protease,transposase	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1447210_1448161_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1449362_1449809_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1449801_1451277_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1451273_1452029_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1452021_1453032_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1453021_1454698_-	flagellar M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1455010_1455343_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1455356_1455752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1455761_1456088_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
WP_019247563.1|1456084_1456411_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023997203.1|1456337_1456751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1457355_1457706_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1457753_1458182_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1458189_1459563_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1459703_1460081_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1460343_1461651_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1461711_1462542_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1462538_1463027_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1463068_1464589_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1464632_1465109_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1465912_1468510_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1468539_1469361_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1470087_1470837_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1471020_1471899_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1471996_1472713_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1472727_1473288_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1473454_1474219_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1474238_1475096_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1475092_1476292_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1476331_1477666_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1477718_1480055_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1480180_1480744_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1480752_1481844_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1481915_1482371_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1482371_1483166_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1483162_1484344_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1484330_1484936_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1484932_1485706_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1485717_1486545_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1486706_1489070_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1489137_1489857_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1489980_1490406_+	NfeD family protein	NA	NA	NA	NA	NA
WP_005012067.1|1490440_1491391_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1491508_1492435_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1492500_1493658_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1493638_1494106_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1494253_1495204_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1495220_1495655_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1495644_1495995_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1496191_1497346_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811746.1|1497342_1498515_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1498562_1499456_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1499501_1499939_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1499998_1500688_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1500697_1501648_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1501746_1502697_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	1597394	1665480	4106666	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1597394_1597883_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1598000_1598579_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1598684_1599053_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1599151_1600102_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1600108_1601221_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1601907_1603110_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1603145_1603292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1603313_1605974_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1605986_1609391_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1610058_1612284_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1612330_1612657_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1612707_1613316_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1613414_1614365_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1614434_1615199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1615195_1615795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1615898_1616750_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1616809_1617436_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1617432_1618383_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1618481_1619594_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1619583_1620585_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1620690_1622202_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1622198_1623503_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1623614_1624175_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1624442_1624997_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1625452_1625668_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1625922_1628520_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1628516_1629704_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930436.1|1630362_1630977_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1631065_1632193_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1632204_1633110_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1634002_1634953_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1635134_1635887_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1635955_1636615_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1636611_1637340_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1637352_1639632_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1639656_1639860_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1639901_1640534_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1640669_1641587_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1641583_1642297_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1642534_1643305_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1643309_1643909_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1644153_1645644_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1645702_1645987_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1646124_1646280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1646552_1647479_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1647615_1648356_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1648522_1649899_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1650080_1650986_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1652637_1654440_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1654566_1655208_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1655306_1656257_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1656278_1657499_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1657684_1659097_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1659160_1660228_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1660227_1661715_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1661724_1662669_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1662828_1663527_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1663604_1664510_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1664529_1665480_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	1701429	1757020	4106666	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1701429_1702380_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1702438_1703212_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1703204_1704761_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1704757_1705708_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1707034_1707637_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1707876_1708578_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1708571_1709354_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1709538_1710489_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1710587_1711325_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1711514_1712273_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1712319_1713309_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1713486_1714455_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1715994_1716963_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1716971_1717913_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1718386_1719397_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1719387_1720902_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1720898_1722245_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1722247_1723282_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1723331_1724957_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1725509_1726460_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1726564_1727512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1727565_1729380_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1729372_1730047_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1730176_1733251_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1733264_1733564_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1733878_1734502_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1734745_1735615_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1735592_1736537_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1736622_1737549_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1737661_1738441_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1738431_1739628_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1739658_1740609_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1740830_1741520_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1741584_1742340_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1742391_1743384_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1743393_1744347_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1744462_1745425_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1746826_1747255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1747251_1748202_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1748495_1749233_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1749656_1750844_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1750847_1751228_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1752947_1753919_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1753932_1754646_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1754650_1755568_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1755674_1755971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1756069_1757020_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	1989784	2059436	4106666	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1989784_1992442_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1992519_1993722_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1993718_1994231_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1994353_1994791_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1995067_1996018_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1996116_1997067_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1997320_1999126_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1999239_1999407_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1999470_1999707_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|2000075_2001275_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2002790_2003741_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2004192_2005194_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2005366_2006224_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2006220_2007483_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2007583_2007958_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|2008030_2009218_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2009302_2010073_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2010186_2010951_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2010901_2012203_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|2012199_2013006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|2014750_2015722_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2015878_2016391_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2016549_2017524_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2018524_2019319_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2019344_2020151_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2020261_2020852_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2020862_2022041_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2022143_2022518_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2022770_2024102_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2024168_2027399_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2028889_2029636_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2029720_2030182_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2030219_2031278_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2031240_2033070_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2033109_2033682_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2035106_2035928_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2036246_2037569_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2037928_2038564_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2038523_2039474_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2040344_2041217_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2041294_2042434_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2042792_2044049_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2044054_2044582_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2044586_2045405_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2045404_2046127_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2046148_2046463_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2046480_2047629_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2047659_2048535_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2048531_2049851_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2049923_2051120_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2051130_2052618_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_062826582.1|2055212_2056112_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2056249_2057215_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2057313_2058264_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2058485_2059436_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2070932	2120328	4106666	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2070932_2071883_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2073020_2073317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2073491_2074844_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2074986_2076003_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2077982_2078996_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2079082_2079988_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2080144_2080489_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2080646_2081105_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2081118_2083335_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2083331_2084393_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2084421_2085396_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2085347_2086166_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2086178_2086787_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2086961_2087357_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2087375_2088815_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2088843_2089191_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2089209_2090160_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2090812_2091763_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2091846_2093664_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2093737_2094385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2094397_2095327_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2095496_2095961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2096208_2096889_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2096937_2098629_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2098644_2099196_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2099192_2099564_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2099676_2100513_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2100523_2101048_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2101145_2101325_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2101454_2102429_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2102559_2102916_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2102905_2103781_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2103879_2104764_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2104785_2106081_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2107029_2107680_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2107767_2109288_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2109545_2111411_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2112456_2113407_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2113424_2113565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2114379_2114739_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2114726_2116163_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2116159_2116813_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2116809_2118003_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2118106_2119381_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2119377_2120328_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2131532	2172223	4106666	protease,transposase,tRNA	Klosneuvirus(25.0%)	37	NA	NA
WP_005013747.1|2131532_2132483_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2132581_2133532_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2133491_2133905_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2134189_2134489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2134898_2137181_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2137646_2137841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2137866_2139897_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2139916_2140129_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2140406_2140946_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2141059_2142355_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2142431_2143589_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2143772_2144672_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2144690_2145995_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2145960_2147067_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2147154_2147391_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2147529_2148600_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2148603_2149959_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2149985_2151146_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2151148_2151787_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2151788_2153075_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2153133_2154429_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2154435_2154942_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2154938_2156087_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2156114_2156540_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2156862_2159745_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2159837_2160593_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2161358_2162708_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2162806_2163757_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2163855_2164806_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2164879_2165353_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2165378_2166587_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2166583_2167357_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2167356_2167980_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2168145_2168406_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2168709_2169291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2169357_2169612_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2169598_2172223_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 20
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2200006	2265555	4106666	protease,transposase,tRNA	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010929577.1|2200006_2200957_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2201157_2201967_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2202091_2203042_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2203038_2203932_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2204056_2204251_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2204250_2204592_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2204601_2206464_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2206593_2207106_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2207108_2207432_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2207433_2207844_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2207881_2209093_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2209110_2209623_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2209838_2210330_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2210582_2212619_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2212696_2213899_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2214027_2214678_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2216235_2217186_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2217756_2217969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2217986_2218718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2218752_2219394_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2219386_2220055_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2222267_2223044_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2223065_2224223_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2224219_2224651_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2224647_2225451_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2225464_2225866_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2225932_2226904_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2226969_2228193_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2228420_2229371_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2229494_2231948_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2232136_2233441_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2233545_2234199_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2234201_2235512_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2235708_2236269_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2236380_2236581_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2236926_2237493_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2237576_2237780_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2238086_2238407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2238448_2238730_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2238804_2240061_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2240443_2240773_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2242343_2243165_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2243164_2244304_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2244310_2245207_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2245203_2247129_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2247488_2250101_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2250153_2252454_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2252450_2253659_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2253920_2254295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2254291_2255242_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2255340_2257335_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2257394_2258360_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2258349_2261211_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2261213_2261720_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2261824_2263033_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2263034_2263973_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2264134_2264608_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2264604_2265555_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2685198	2725867	4106666	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2685198_2686149_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2686259_2686442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2686541_2687138_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2687321_2688413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2688912_2689323_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2689381_2689723_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2689728_2692146_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2692158_2693181_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2693255_2693615_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2693630_2693828_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2694163_2695114_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2695308_2695758_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2695754_2696705_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2696815_2698264_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2698378_2698660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2698763_2699714_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2699958_2700672_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2700794_2701022_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2701316_2701955_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2702063_2703098_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2703094_2704045_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2704460_2704985_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2704988_2705258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2705456_2706518_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2706601_2708236_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2708237_2709041_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2709069_2710029_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2710032_2711547_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2711583_2712588_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2713019_2713490_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2713525_2714137_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2714167_2714791_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2714871_2716404_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2716438_2717680_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2717723_2718755_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2718751_2719921_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931025.1|2719914_2720595_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|2720756_2721599_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2721761_2722733_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2722904_2723783_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2723805_2724876_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2724916_2725867_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2781332	2854202	4106666	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2781332_2781749_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2781859_2782492_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2782520_2782964_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2782985_2784077_-	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931063.1|2784131_2784932_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2785067_2785688_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931065.1|2785827_2786301_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2787440_2788391_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2788387_2796049_-	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2796289_2800336_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2800648_2801230_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2801226_2802525_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2802604_2803633_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2803893_2804844_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2804840_2805791_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2806107_2806713_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2806766_2808080_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2808154_2808625_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2808624_2809413_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2809423_2811076_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2811163_2812114_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2813275_2813782_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2813778_2814543_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2814558_2814843_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2814907_2815897_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2816068_2816998_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2816969_2817656_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2817689_2818235_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2818279_2819545_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2819541_2820444_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2821625_2822570_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2822664_2824182_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2824223_2825852_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2825959_2826841_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2829953_2830328_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2830352_2830691_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2830734_2832369_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2832407_2833754_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2833861_2835283_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2835352_2835937_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2836039_2836990_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2837124_2838231_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2838241_2839339_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2839483_2840689_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2840695_2841217_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2841213_2841705_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2841701_2841953_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2841933_2842419_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2842554_2846016_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2846033_2846918_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2846927_2847359_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2847605_2848109_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2848186_2849587_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2849661_2850537_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2850533_2851541_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2852008_2852314_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2852404_2852995_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2853185_2854202_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2857345	2924157	4106666	protease,transposase	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_023995489.1|2857345_2858296_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2858394_2859345_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2859341_2860136_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2860167_2860872_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2860946_2861747_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2861743_2862151_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2862147_2862789_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2862781_2864782_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2866042_2867374_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2867370_2868321_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2870027_2870294_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2871001_2871340_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2875894_2876497_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2876593_2877883_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2877940_2878672_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2878668_2879472_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2879468_2880557_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2880553_2881483_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2881631_2882777_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2882798_2883749_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2883766_2883925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2884079_2887901_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2888057_2888726_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2888730_2890404_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2890422_2891742_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2891746_2894062_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2894117_2896286_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2896282_2901472_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2901561_2901876_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2902103_2902349_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2902443_2902962_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2903061_2904267_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2904382_2905780_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2905896_2906475_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2906547_2907939_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2908106_2909057_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2909337_2909958_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2909954_2910368_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2910364_2911408_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2911463_2911652_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2911661_2912426_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2912516_2913173_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2913264_2914023_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2914048_2915650_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2915850_2916855_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2916955_2917219_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2917336_2918113_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2918703_2919654_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2922037_2923150_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2923206_2924157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	2954542	2993719	4106666	transposase	Planktothrix_phage(50.0%)	37	NA	NA
WP_005012067.1|2954542_2955493_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2955510_2955660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2955613_2956510_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2958787_2961013_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2961177_2962266_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2962222_2962876_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2962923_2963721_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2964240_2965191_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|2965265_2966420_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2966476_2967427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2967525_2967831_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2967859_2968294_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2968295_2969540_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2969536_2970247_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2970261_2971173_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2971535_2971940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2971936_2972395_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|2972401_2973310_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|2973306_2974173_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2974159_2974987_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2974997_2976125_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2977202_2978441_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2978482_2979745_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2979751_2980504_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2980555_2980741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2981016_2981481_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2981512_2982172_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2982316_2984425_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2984421_2985372_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2985475_2986096_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|2986187_2986940_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2988074_2989199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2989244_2989613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2989854_2990805_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2991840_2992383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2992580_2992751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2992768_2993719_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	3379216	3432957	4106666	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3379216_3380167_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3380571_3381216_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3381240_3381825_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3381925_3382543_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3382545_3384261_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3384257_3384566_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3384582_3385200_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3385244_3385547_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3385647_3386502_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3386689_3386914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3387083_3387356_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3387773_3388181_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3388550_3389345_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3389445_3390681_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3390749_3391766_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3391777_3393154_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3393150_3394347_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3394343_3395882_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3395878_3397138_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3399078_3400029_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3400795_3401890_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3401882_3403217_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3403170_3403854_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3403879_3405043_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3405039_3406041_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3406040_3406913_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3406909_3407659_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3407655_3408447_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3408443_3409583_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3409858_3410644_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3410677_3411460_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3411463_3411853_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3412992_3413856_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3413891_3414980_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3414976_3415927_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3416280_3419259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3420185_3421064_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3423012_3423963_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3423959_3424427_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3424469_3425240_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010927090.1|3425260_3426061_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3426071_3427481_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3427575_3428361_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3428600_3429617_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3429724_3430117_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3430254_3430935_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3430939_3431911_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3432006_3432957_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	3439112	3498412	4106666	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3439112_3440876_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3440987_3441866_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3441978_3442794_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3442797_3443049_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3443133_3444150_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3444480_3444702_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3447062_3447980_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3448477_3449686_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3449765_3451337_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3451454_3452390_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3452578_3453523_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3454090_3459808_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3459813_3460941_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3460996_3461623_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3461894_3462911_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3463006_3463717_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3463713_3464703_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3464798_3466430_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3466432_3467170_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3467325_3468198_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3468466_3469687_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3469683_3470343_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3470414_3471047_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3471076_3471595_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3471605_3472715_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3472761_3473616_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3473617_3474520_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3475742_3476693_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3478449_3479439_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3479435_3479594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3479614_3480403_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3480399_3481431_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3481449_3482013_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3482068_3483589_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3483852_3484557_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3484564_3485302_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3485407_3485782_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3485824_3487114_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3487110_3488280_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3488276_3489116_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3489175_3490111_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3490123_3491074_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3491172_3492135_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3492166_3492526_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3492650_3493553_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3493554_3495327_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3495361_3496138_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3497461_3498412_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	3513350	3572472	4106666	transposase,tRNA	Planktothrix_phage(12.5%)	48	NA	NA
WP_010929584.1|3513350_3514301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3514429_3515563_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3515606_3516512_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3516514_3518215_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3518211_3519132_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3519139_3520117_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3520175_3521210_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3523184_3523421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023995266.1|3523547_3524411_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3524499_3525321_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3525400_3526138_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3526134_3527127_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3527240_3527903_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3527947_3529096_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3531419_3532370_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3532710_3533661_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3533759_3534710_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3535006_3535504_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3535546_3537322_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3537329_3538196_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3538202_3538937_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3540106_3540901_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3541190_3541781_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3541814_3543143_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3543217_3544363_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3544474_3545473_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3545435_3545870_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3547386_3548271_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3548267_3549473_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3549469_3550330_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3550442_3552233_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3552273_3552939_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3552939_3553248_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3553413_3554700_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_005012067.1|3556133_3557084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929969.1|3557182_3558133_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3560084_3561299_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3561404_3562394_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3562390_3562999_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3563011_3563641_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3563637_3564258_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3564289_3565081_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3565932_3566388_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3566406_3567333_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3567386_3568673_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3569603_3570476_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3570472_3571423_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3571521_3572472_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP010262	Bordetella pertussis strain I539 chromosome, complete genome	4106666	4027788	4081220	4106666	transposase	Planktothrix_phage(40.0%)	46	NA	NA
WP_010931661.1|4027788_4028739_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4028908_4030135_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4030334_4031201_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4031193_4032156_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4032256_4033207_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4033305_4034256_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4034354_4035305_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4035301_4036795_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4036791_4039899_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4039895_4042964_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4042960_4044211_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4044391_4045153_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4045185_4045836_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4045838_4046678_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4046918_4047662_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4047744_4048092_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4048189_4049032_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4049076_4049964_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4049990_4050179_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4050276_4051734_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4051720_4053247_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4053265_4053733_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4053732_4054755_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4054875_4055595_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4055670_4056771_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4056772_4057963_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4058082_4059099_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4059417_4060089_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4060085_4060994_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4061205_4061853_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4065704_4066781_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4066791_4067601_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4067690_4068464_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4068464_4068629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4068646_4069597_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4069485_4070508_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4070497_4071652_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4071691_4073104_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4073228_4074095_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4074096_4074921_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4074917_4075679_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4075759_4076446_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4076619_4077627_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4077623_4078403_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4078460_4079723_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4080269_4081220_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
