The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015033	Burkholderia cenocepacia strain 842 chromosome 1, complete sequence	3526250	182345	191413	3526250		unidentified_phage(16.67%)	7	NA	NA
WP_006484964.1|182345_183896_+	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	31.3	9.5e-24
WP_006476832.1|183931_184474_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_006484932.1|184470_185157_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	26.4	7.2e-08
WP_006485002.1|185200_186016_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	34.2	1.8e-37
WP_062884101.1|186144_188067_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	NA	S4VNU7	Pandoravirus	37.4	6.9e-56
WP_006476837.1|188070_189207_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	5.0e-22
WP_006484920.1|189460_191413_-	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	50.3	2.5e-146
>prophage 2
NZ_CP015033	Burkholderia cenocepacia strain 842 chromosome 1, complete sequence	3526250	512398	517301	3526250	protease	Acidithiobacillus_phage(33.33%)	6	NA	NA
WP_080324571.1|512398_512869_+	excisionase family DNA-binding protein	NA	K4ICM4	Acidithiobacillus_phage	34.5	1.5e-17
WP_062884740.1|512870_513452_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	35.9	2.3e-23
WP_062884148.1|514123_514651_+	hypothetical protein	NA	A4JWV5	Burkholderia_virus	65.1	1.7e-57
WP_062884149.1|514647_515376_+	VRR-NUC domain-containing protein	NA	A4JWV4	Burkholderia_virus	48.3	1.5e-48
WP_062884150.1|515385_516498_+	DUF3396 domain-containing protein	NA	E5E3X7	Burkholderia_phage	93.8	4.3e-204
WP_059723936.1|516785_517301_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	52.0	9.5e-21
>prophage 1
NZ_CP015034	Burkholderia cenocepacia strain 842 chromosome 2, complete sequence	3107451	559744	621833	3107451	transposase,holin	Burkholderia_phage(20.0%)	53	NA	NA
WP_062884928.1|559744_560698_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_124550714.1|561076_561310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006484721.1|561361_562243_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006498764.1|562364_562808_+	DMT family transporter	NA	NA	NA	NA	NA
WP_062884929.1|562862_564368_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_062884930.1|564401_564932_-	cytochrome C	NA	NA	NA	NA	NA
WP_059721840.1|564928_565429_-	cytochrome c	NA	NA	NA	NA	NA
WP_006483798.1|565425_565971_-	amine dehydrogenase	NA	NA	NA	NA	NA
WP_034178328.1|566010_566637_-	methylamine dehydrogenase accessory protein MauD	NA	NA	NA	NA	NA
WP_062884931.1|566633_567188_-	methylamine utilization protein MauE	NA	NA	NA	NA	NA
WP_062884932.1|567195_568353_-	amine dehydrogenase	NA	NA	NA	NA	NA
WP_060263707.1|568593_569556_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_006483802.1|569683_570628_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_048985100.1|571119_572832_+	peptidase	NA	NA	NA	NA	NA
WP_058903454.1|572911_574162_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_006491379.1|574294_574663_+	YbjQ family protein	NA	NA	NA	NA	NA
WP_034201984.1|574852_576103_-	MFS transporter	NA	NA	NA	NA	NA
WP_006483801.1|576346_577486_-	porin	NA	NA	NA	NA	NA
WP_059721832.1|577746_578715_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_006491381.1|578760_580296_-|holin	choline-sulfatase	holin	NA	NA	NA	NA
WP_006486273.1|580533_581439_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006486276.1|581610_582495_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_062884227.1|582573_583794_-|transposase	ISL3 family transposase	transposase	A9YX10	Burkholderia_phage	94.1	5.1e-230
WP_006486278.1|583982_585638_-	APC family permease	NA	NA	NA	NA	NA
WP_006486270.1|585816_586680_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_006498749.1|586814_587963_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_006486272.1|587992_589234_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_006491387.1|589286_590072_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_006488991.1|590068_591238_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_034201981.1|591242_593168_-	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_006488987.1|593171_595235_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_062884933.1|595303_595837_-	4-vinyl reductase	NA	NA	NA	NA	NA
WP_006488981.1|595976_596948_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_006488995.1|596987_598262_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	54.2	5.9e-104
WP_077175816.1|598618_599734_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_112750434.1|599806_601170_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	54.0	2.7e-78
WP_062884934.1|601245_602655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006498742.1|602929_604351_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_060263887.1|604555_605329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062884935.1|605492_606380_+	DMT family transporter	NA	NA	NA	NA	NA
WP_006498737.1|606368_607283_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006488979.1|607436_608633_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.7	4.9e-12
WP_006488988.1|608645_608885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062884936.1|608859_610050_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_062884937.1|610049_611912_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_006482184.1|611914_612853_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_060263880.1|612863_614471_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_062884938.1|614467_615751_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_006482692.1|615768_616338_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_006498732.1|616405_617308_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_062884939.1|618029_618614_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_062884940.1|618646_620116_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_062884941.1|620132_621833_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	29.7	3.8e-50
>prophage 1
NZ_CP015032	Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence	244120	87078	147547	244120	integrase,transposase	Trichoplusia_ni_ascovirus(16.67%)	50	106121:106137	125988:126004
WP_062883921.1|87078_89214_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_059677875.1|89877_90156_+	HU family DNA-binding protein	NA	Q6QIE5	Burkholderia_phage	55.1	2.6e-17
WP_059677874.1|90152_91307_+	DUF1016 domain-containing protein	NA	A0A0U2BZN7	Salmonella_phage	72.2	2.8e-60
WP_059677872.1|92599_93463_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_059677871.1|93459_94212_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.4	1.1e-12
WP_059677870.1|94288_95617_+	MFS transporter	NA	NA	NA	NA	NA
WP_059677869.1|95647_96826_+	L-rhamnonate dehydratase	NA	Q6A202	Oenococcus_phage	28.0	1.3e-28
WP_059677868.1|96846_97629_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.1	2.7e-19
WP_059677867.1|97657_98602_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_059677866.1|98732_99047_+	L-rhamnose mutarotase	NA	NA	NA	NA	NA
WP_080465450.1|99336_101136_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_062883925.1|101146_102016_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_080465451.1|102008_102521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154817256.1|102642_103056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062883927.1|103373_104777_+	MFS transporter	NA	NA	NA	NA	NA
WP_062883928.1|104790_105336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062883929.1|105498_106647_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
106121:106137	attL	AGGCTGTCGACTTCAAG	NA	NA	NA	NA
WP_062883930.1|106708_107983_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_062883931.1|108055_108958_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_062883932.1|109186_110137_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_062883933.1|110150_111320_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_044845603.1|111343_112120_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.6	1.4e-15
WP_062883934.1|112119_112836_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	28.3	3.0e-12
WP_154817257.1|112897_113896_+	4-hydroxyproline epimerase	NA	NA	NA	NA	NA
WP_062883936.1|113945_115181_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_062884019.1|115274_115997_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_080465452.1|118407_119493_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_062884020.1|119618_120743_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_062883937.1|121024_121975_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_062883938.1|122203_123079_+	transporter	NA	NA	NA	NA	NA
WP_154817258.1|123168_123690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154817266.1|123688_125353_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2K9VH72	Gordonia_phage	30.9	1.6e-05
WP_062883940.1|125480_126629_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
125988:126004	attR	CTTGAAGTCGACAGCCT	NA	NA	NA	NA
WP_062883941.1|127553_129044_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_062883942.1|129083_130673_+	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA	NA
WP_062883943.1|131606_132944_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA	NA
WP_062883944.1|132970_134341_-	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA	NA
WP_062883945.1|134485_135217_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062883946.1|135464_136262_-	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_062884021.1|136525_138367_+	bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA	NA	NA	NA	NA
WP_062884022.1|138368_139349_+	3-carboxyethylcatechol 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_062883947.1|139353_140133_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_062883948.1|140141_141089_+	acetaldehyde dehydrogenase (acetylating)	NA	G9E526	Ostreococcus_lucimarinus_virus	33.4	6.8e-33
WP_062883949.1|141101_142115_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	33.2	2.2e-45
WP_062883950.1|142222_143452_+	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA	NA
WP_062884023.1|143561_144431_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_080465453.1|144702_145146_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_062883952.1|145117_146698_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.2	1.0e-73
WP_062883953.1|146729_147080_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	40.4	2.5e-17
WP_080465454.1|147055_147547_-|transposase	transposase	transposase	NA	NA	NA	NA
