assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001610935.1_ASM161093v1	NZ_CP012731	Streptococcus suis strain 90-1330 chromosome, complete genome	1	189953-190448	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	csn2,cas2,cas1,cas9,DinG,cas3,DEDDh,csa3	Type II-B,Type II-A,Type II-C	GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC,GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC,GTTTTACTGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	1	1	190384-190412	NZ_CP012731.1_1929478-1929506	NA:NA:NA	7,7,6	7	TypeII-B,TypeII-A,TypeII-C	csn2,cas2,cas1,cas9,DinG,cas3,DEDDh,csa3	NA,NA|103aa|down_5|NZ_CP012731.1_199686_199995_-	NA|206aa|up_9|NZ_CP012731.1_179759_180377_-	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|247aa|up_8|NZ_CP012731.1_180363_181104_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|376aa|up_7|NZ_CP012731.1_181334_182462_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|193aa|up_6|NZ_CP012731.1_182556_183135_+	pfam04892, VanZ, VanZ like family	NA|756aa|up_5|NZ_CP012731.1_183269_185537_-	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|238aa|up_4|NZ_CP012731.1_185713_186427_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|270aa|up_3|NZ_CP012731.1_186459_187269_-	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|119aa|up_2|NZ_CP012731.1_187280_187637_-	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|404aa|up_1|NZ_CP012731.1_187636_188848_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|225aa|up_0|NZ_CP012731.1_189176_189851_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	csn2|349aa|down_0|NZ_CP012731.1_190508_191555_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|NZ_CP012731.1_191551_191875_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|305aa|down_2|NZ_CP012731.1_191871_192786_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1123aa|down_3|NZ_CP012731.1_192952_196321_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|458aa|down_4|NZ_CP012731.1_197004_198378_+	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|103aa|down_5|NZ_CP012731.1_199686_199995_-	NA	NA|488aa|down_6|NZ_CP012731.1_200083_201547_-	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|194aa|down_7|NZ_CP012731.1_201558_202140_-	pfam04011, LemA, LemA family	NA|261aa|down_8|NZ_CP012731.1_202212_202995_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|193aa|down_9|NZ_CP012731.1_203066_203645_-	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily
GCF_001610935.1_ASM161093v1	NZ_CP012731	Streptococcus suis strain 90-1330 chromosome, complete genome	2	2118339-2118422	2	CRISPRCasFinder	no		csn2,cas2,cas1,cas9,DinG,cas3,DEDDh,csa3	Orphan	GGAGGTTGGAAATTGAGCGAACGAAGTT	28	0	0	NA	NA	NA	1	1	Orphan	csn2,cas2,cas1,cas9,DinG,cas3,DEDDh,csa3	NA|252aa|up_5|NZ_CP012731.1_2112069_2112825_+,NA|181aa|up_3|NZ_CP012731.1_2114450_2114993_-,NA|157aa|up_2|NZ_CP012731.1_2115012_2115483_-,NA	NA|311aa|up_9|NZ_CP012731.1_2108910_2109843_-	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional	NA|172aa|up_8|NZ_CP012731.1_2109852_2110368_-	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed	NA|141aa|up_7|NZ_CP012731.1_2110394_2110817_-	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed	NA|256aa|up_6|NZ_CP012731.1_2111023_2111791_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|252aa|up_5|NZ_CP012731.1_2112069_2112825_+	NA	NA|344aa|up_4|NZ_CP012731.1_2113193_2114225_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|181aa|up_3|NZ_CP012731.1_2114450_2114993_-	NA	NA|157aa|up_2|NZ_CP012731.1_2115012_2115483_-	NA	NA|267aa|up_1|NZ_CP012731.1_2115614_2116415_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|387aa|up_0|NZ_CP012731.1_2117077_2118238_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|131aa|down_0|NZ_CP012731.1_2118472_2118865_-	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|581aa|down_1|NZ_CP012731.1_2118848_2120591_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|579aa|down_2|NZ_CP012731.1_2120577_2122314_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|325aa|down_3|NZ_CP012731.1_2122315_2123290_-	PRK09653, eutD, phosphotransacetylase	NA|298aa|down_4|NZ_CP012731.1_2123307_2124201_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|276aa|down_5|NZ_CP012731.1_2124200_2125028_-	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|224aa|down_6|NZ_CP012731.1_2125002_2125674_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|189aa|down_7|NZ_CP012731.1_2125760_2126327_+	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|326aa|down_8|NZ_CP012731.1_2126471_2127449_+	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|372aa|down_9|NZ_CP012731.1_2127459_2128575_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
