The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	198026	241260	2125430	protease,transposase	Streptococcus_phage(30.77%)	35	NA	NA
WP_056986369.1|198026_200270_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.9	1.3e-122
WP_046871847.1|200366_202499_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	45.4	2.7e-146
WP_046871848.1|202732_204310_-	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	26.3	3.7e-31
WP_046871849.1|206356_207196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062913088.1|207545_208775_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.4	1.5e-80
WP_062913089.1|208998_209409_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.0	2.8e-15
WP_056986464.1|209518_210625_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_046872086.1|210928_211486_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_046872291.1|211640_213008_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_052694544.1|213192_214392_-	serine hydrolase	NA	NA	NA	NA	NA
WP_062913090.1|214415_215237_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_046872084.1|215493_215955_+	flavodoxin	NA	NA	NA	NA	NA
WP_046872083.1|215985_216405_-	GtrA family protein	NA	NA	NA	NA	NA
WP_046872082.1|216411_217536_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	27.2	1.4e-24
WP_056986623.1|217841_219218_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_081113847.1|219444_220824_-	purine permease	NA	NA	NA	NA	NA
WP_046872508.1|221077_221311_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_056986291.1|221416_223288_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.6	3.6e-102
WP_046872509.1|223709_223940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158510929.1|223936_224857_-	DegV family EDD domain-containing protein	NA	A0A0N9SI50	Staphylococcus_phage	32.8	6.1e-10
WP_046872511.1|225221_226877_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_046872513.1|227491_227947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872383.1|228162_228705_+	VanZ family protein	NA	NA	NA	NA	NA
WP_141306346.1|228794_229283_+	VanZ family protein	NA	NA	NA	NA	NA
WP_062913092.1|229421_230903_-	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
WP_046872381.1|231038_232076_-	LCP family protein	NA	NA	NA	NA	NA
WP_062913093.1|232207_233056_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.6	8.9e-32
WP_046872379.1|233120_234158_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	40.0	1.8e-63
WP_192868929.1|234162_234735_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A1D7XFA9	Escherichia_phage	42.6	8.3e-34
WP_062913094.1|234743_235616_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	60.1	2.1e-100
WP_046872376.1|235756_236908_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010492178.1|237364_238540_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_062913095.1|238604_239111_-	CatB-related O-acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	38.6	4.3e-18
WP_158510930.1|239112_239793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872291.1|239892_241260_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	480308	531908	2125430	tRNA,transposase	Streptococcus_phage(50.0%)	43	NA	NA
WP_062904288.1|480308_481514_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
WP_046872562.1|482058_482613_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_046872561.1|482666_483575_+	proline-specific peptidase family protein	NA	NA	NA	NA	NA
WP_046872560.1|483639_485187_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	28.4	1.2e-42
WP_046872559.1|485328_485706_+	VOC family protein	NA	NA	NA	NA	NA
WP_046872217.1|485765_487013_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	52.7	4.0e-105
WP_046872218.1|487009_487840_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.6	2.4e-42
WP_046870732.1|488012_488828_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_046870733.1|488899_489775_-	DegV family protein	NA	NA	NA	NA	NA
WP_046870734.1|489779_490100_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	42.7	1.2e-21
WP_081113877.1|490244_490904_-	TerC family protein	NA	A0A068EP98	Bacillus_phage	47.0	4.6e-36
WP_062904067.1|491147_492068_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_046870736.1|492211_494887_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_046870737.1|495571_496336_-	YibE/F family protein	NA	NA	NA	NA	NA
WP_100077854.1|496332_497451_-	YibE/F family protein	NA	NA	NA	NA	NA
WP_046870739.1|497495_497924_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046870740.1|498112_500272_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	48.1	5.0e-172
WP_046870741.1|500349_501333_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K9L162	Tupanvirus	25.2	1.3e-15
WP_046870742.1|501335_501779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870743.1|501836_502310_-	NUDIX domain-containing protein	NA	D0R7J3	Paenibacillus_phage	36.6	1.0e-13
WP_046870744.1|502609_503569_+	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_062913141.1|503714_505712_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_046870746.1|505777_506713_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_062913142.1|506979_507405_+	helix-turn-helix transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	38.9	4.9e-07
WP_046870748.1|507445_508297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062913143.1|508790_510167_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046870749.1|510484_511258_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010620873.1|511479_512652_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_062913144.1|513139_513766_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_046870751.1|514010_514655_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_046870752.1|514663_515122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870754.1|515888_516347_+	universal stress protein	NA	NA	NA	NA	NA
WP_046870755.1|516418_517303_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_062904063.1|517334_518081_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_056986599.1|518185_520552_-	phosphoketolase family protein	NA	NA	NA	NA	NA
WP_046872328.1|520788_521511_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062913145.1|521699_523067_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_080945589.1|523191_523695_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_046872418.1|523824_525354_-	accessory Sec system glycosyltransferase Asp1	NA	NA	NA	NA	NA
WP_046872419.1|525354_526914_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_062913143.1|527234_528611_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062913146.1|528792_530193_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_056986623.1|530531_531908_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	778094	785697	2125430		Enterococcus_phage(66.67%)	7	NA	NA
WP_062913189.1|778094_779882_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	43.3	6.0e-54
WP_046871055.1|780072_780591_-	nucleoside deaminase	NA	A0A0B5J096	Pandoravirus	39.7	5.1e-06
WP_056986262.1|780580_781204_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_046871054.1|781504_781735_+	redoxin NrdH	NA	X2KRY7	Enterococcus_phage	44.0	1.2e-12
WP_046871053.1|781844_784010_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.9	8.6e-257
WP_046871069.1|784035_785055_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	60.4	1.8e-111
WP_052694474.1|785118_785697_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	35.7	3.4e-19
>prophage 4
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	837219	885107	2125430	bacteriocin,transposase	Staphylococcus_phage(30.0%)	55	NA	NA
WP_056986621.1|837219_838449_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_080945571.1|838916_839102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872214.1|839094_839787_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_062913197.1|839803_840925_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_046872216.1|840917_841253_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872497.1|841362_841578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872498.1|842139_843363_+	MFS transporter	NA	NA	NA	NA	NA
WP_056986019.1|843392_844160_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_052694578.1|844161_845052_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.9	2.7e-31
WP_046872521.1|845215_845449_-	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_046872520.1|845509_845716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155387016.1|845898_846057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986621.1|846410_847640_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_062913198.1|848192_849026_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_046871034.1|849018_850728_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.0	3.4e-22
WP_046871033.1|850732_851290_-	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_046871030.1|853972_854689_+	trehalose operon repressor	NA	NA	NA	NA	NA
WP_056986021.1|854701_856354_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
WP_145930482.1|856939_857536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062913199.1|857757_858354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871043.1|858614_859520_-	EamA family transporter	NA	NA	NA	NA	NA
WP_062913200.1|859698_859950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871025.1|859949_860264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871024.1|860504_861656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871023.1|861804_864318_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	31.9	3.6e-137
WP_155386958.1|864443_864593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871042.1|864650_865055_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_100077967.1|865070_865292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155386956.1|865651_865801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062913453.1|866022_867270_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	23.8	3.5e-08
WP_046871021.1|867388_868690_-	D-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_046871019.1|869444_870056_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.0	1.6e-22
WP_046871018.1|870052_870577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871017.1|870557_871364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871016.1|871455_871770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017866964.1|872006_872264_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	47.1	1.0e-15
WP_145930483.1|872248_873133_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	48.3	2.2e-65
WP_046871015.1|873342_873858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062913454.1|873835_874432_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.6	3.1e-23
WP_046871014.1|874485_875175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141306314.1|875175_875844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871012.1|875827_876640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871011.1|876711_877113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871010.1|877165_878269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871009.1|878258_878771_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_046871008.1|879440_879668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871007.1|879801_879999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062913202.1|879998_880781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871006.1|880963_881713_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_062903989.1|881713_883060_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_046871003.1|883234_883585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871002.1|883673_883862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871001.1|883970_884240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871000.1|884300_884564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870999.1|884774_885107_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	1407764	1476080	2125430	tRNA,protease,transposase	Streptococcus_phage(28.57%)	54	NA	NA
WP_062913461.1|1407764_1408970_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.0	1.7e-89
WP_062913310.1|1409281_1410052_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_056986064.1|1410054_1411038_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_056986063.1|1411302_1412508_-	CotH kinase family protein	NA	NA	NA	NA	NA
WP_056986062.1|1412538_1413039_-	SH3-like domain-containing protein	NA	NA	NA	NA	NA
WP_046871591.1|1413270_1414161_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_145930491.1|1414246_1414558_+	DUF3899 domain-containing protein	NA	NA	NA	NA	NA
WP_046871593.1|1414610_1415417_-	sugar-phosphatase	NA	NA	NA	NA	NA
WP_062913311.1|1415413_1416790_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.7	9.6e-28
WP_046871595.1|1417017_1417458_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_062903871.1|1417503_1418088_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_062913312.1|1418263_1419865_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.6	6.4e-148
WP_046871598.1|1420098_1421379_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_046871599.1|1421388_1422681_+	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_046871600.1|1422789_1423047_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_100078042.1|1423161_1424397_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_046871601.1|1424483_1425200_+	class A sortase	NA	NA	NA	NA	NA
WP_046871602.1|1425244_1425712_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_046871603.1|1425816_1426407_+	LemA family protein	NA	NA	NA	NA	NA
WP_046871604.1|1426437_1427337_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_046871605.1|1427408_1428191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871606.1|1428371_1429748_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_046871607.1|1429925_1431488_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	1.3e-68
WP_046871608.1|1431780_1432140_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_046871609.1|1432146_1433274_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	31.5	1.8e-35
WP_141306217.1|1433351_1433624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062913313.1|1433642_1434014_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	37.9	2.2e-11
WP_046871612.1|1434098_1434464_+	DUF488 family protein	NA	NA	NA	NA	NA
WP_062913314.1|1434460_1434949_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871614.1|1435043_1435553_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	32.7	2.2e-09
WP_046871615.1|1435930_1436578_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_062913143.1|1436911_1438288_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871616.1|1438442_1439834_-	peptidoglycan binding domain-containing protein	NA	NA	NA	NA	NA
WP_062913315.1|1440017_1440980_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_046871618.1|1441307_1441865_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_056986621.1|1442010_1443240_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_046871619.1|1443589_1447096_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_081113880.1|1447142_1448708_+	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_046871932.1|1449227_1449497_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_080945556.1|1449808_1450081_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_046871931.1|1450237_1450729_+	RNA-binding protein S1	NA	NA	NA	NA	NA
WP_062913317.1|1450811_1452209_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A0N7G7K4	Chrysochromulina_ericina_virus	28.7	1.4e-10
WP_046871930.1|1452208_1452751_+	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_046871929.1|1452847_1455025_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	I3UL75	Ostreococcus_lucimarinus_virus	48.8	1.5e-104
WP_046871928.1|1455147_1456032_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_062913318.1|1456165_1457173_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_046871926.1|1457246_1458740_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	37.7	4.3e-90
WP_046872061.1|1464666_1466166_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	36.2	1.3e-70
WP_056986386.1|1466298_1467120_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_062913319.1|1467596_1468460_-	SH3-like domain-containing protein	NA	NA	NA	NA	NA
WP_062913320.1|1468963_1470469_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_080945560.1|1470488_1471799_-	aspartate kinase	NA	NA	NA	NA	NA
WP_046872056.1|1473886_1474684_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	35.3	4.4e-33
WP_062913321.1|1474874_1476080_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	46.9	7.0e-75
>prophage 6
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	1564336	1624808	2125430	tRNA,transposase	Streptococcus_phage(42.86%)	53	NA	NA
WP_046872291.1|1564336_1565704_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_081113866.1|1565707_1568224_+	alpha-mannosidase	NA	NA	NA	NA	NA
WP_046872466.1|1570504_1571524_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_046872468.1|1572155_1573079_+	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
WP_046872469.1|1573146_1574412_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
WP_062913343.1|1574404_1575361_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904541.1|1575451_1575793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904288.1|1576511_1577717_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
WP_046871935.1|1578305_1579184_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871936.1|1579228_1579633_-	HicB family protein	NA	A0A1L2JY34	Aeribacillus_phage	29.6	1.7e-09
WP_046871937.1|1579651_1579840_-	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_046871938.1|1580100_1581729_+	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
WP_062913344.1|1581812_1583195_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_062913345.1|1583264_1584230_+	AEC family transporter	NA	NA	NA	NA	NA
WP_046871941.1|1584712_1585561_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_046871942.1|1585894_1587925_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.7	2.6e-90
WP_056986091.1|1588232_1589018_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_062913346.1|1589004_1589556_+	ribonuclease M5	NA	NA	NA	NA	NA
WP_046871946.1|1589570_1590446_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_062913347.1|1590888_1591449_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871948.1|1591628_1593062_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_046871949.1|1593067_1593814_+	DUF4811 domain-containing protein	NA	NA	NA	NA	NA
WP_046871950.1|1593885_1594197_-	DUF2316 family protein	NA	NA	NA	NA	NA
WP_046871951.1|1594215_1595217_-	amidohydrolase	NA	NA	NA	NA	NA
WP_046871952.1|1595514_1595754_+	Veg family protein	NA	NA	NA	NA	NA
WP_056986094.1|1596004_1596859_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_046871955.1|1597218_1597467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871956.1|1597505_1598168_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_046871957.1|1598388_1598901_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046872318.1|1599106_1599592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872317.1|1599752_1600325_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_046872316.1|1600412_1600877_+	universal stress protein	NA	NA	NA	NA	NA
WP_046872291.1|1601048_1602416_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046872315.1|1602548_1602785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872314.1|1602948_1603398_+	universal stress protein	NA	NA	NA	NA	NA
WP_062913348.1|1603481_1605017_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_046872291.1|1605320_1606688_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062913349.1|1607076_1608585_+	ABC-F type ribosomal protection protein	NA	M1H3A1	Paramecium_bursaria_Chlorella_virus	28.0	9.6e-13
WP_046872308.1|1608710_1609022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155387000.1|1609074_1609251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872307.1|1609263_1610619_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_062913350.1|1610860_1612171_-|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	55.8	2.9e-138
WP_046872306.1|1612349_1613723_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	25.8	7.1e-31
WP_046872305.1|1613919_1614633_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046872304.1|1614688_1615390_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046872302.1|1615774_1616089_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_046872301.1|1616263_1616641_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_046872300.1|1616716_1618168_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_062913352.1|1618286_1619051_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046872297.1|1620900_1621362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872296.1|1621380_1622466_+	DUF871 domain-containing protein	NA	NA	NA	NA	NA
WP_052694556.1|1622869_1623469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056986621.1|1623578_1624808_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
>prophage 7
NZ_CP012294	Pediococcus damnosus strain TMW 2.1536 chromosome, complete genome	2125430	2017791	2027698	2125430	tRNA	Staphylococcus_phage(28.57%)	10	NA	NA
WP_056986001.1|2017791_2019222_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	32.8	7.2e-26
WP_046871118.1|2019233_2019464_-	YozE family protein	NA	NA	NA	NA	NA
WP_046871117.1|2019474_2020080_-	YpmS family protein	NA	NA	NA	NA	NA
WP_046871116.1|2020085_2021024_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_062913427.1|2021128_2021974_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	33.6	1.2e-15
WP_046871114.1|2022043_2022559_-	dihydrofolate reductase	NA	S5M436	Bacillus_phage	42.8	3.5e-23
WP_046871113.1|2022577_2023528_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	62.4	5.0e-116
WP_046871112.1|2023546_2025448_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.5	1.8e-53
WP_046871111.1|2025454_2026678_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	43.0	7.7e-37
WP_046871138.1|2026822_2027698_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.5	1.3e-54
>prophage 1
NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	40553	0	10394	40553	transposase	Streptococcus_phage(50.0%)	11	NA	NA
WP_062913477.1|622_1834_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010492182.1|1866_2238_+	DUF488 family protein	NA	NA	NA	NA	NA
WP_062913478.1|2418_3597_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_162492793.1|3673_3892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024047499.1|4116_4878_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010492191.1|4886_5534_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	52.4	1.4e-50
WP_002823325.1|5710_5974_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	37.6	1.2e-08
WP_003625288.1|6265_6544_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_050340497.1|6533_6836_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_062913480.1|7308_8619_-|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	54.1	7.8e-128
WP_062913481.1|9155_10394_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.9	2.6e-40
>prophage 2
NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	40553	13946	14762	40553		Mycobacterium_phage(100.0%)	1	NA	NA
WP_062913486.1|13946_14762_+	alpha/beta hydrolase	NA	A0A1I9SAY0	Mycobacterium_phage	28.8	3.0e-05
>prophage 3
NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	40553	18892	19603	40553		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_062913493.1|18892_19603_-	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	27.6	3.0e-17
>prophage 4
NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	40553	28680	34935	40553		Streptococcus_phage(25.0%)	7	NA	NA
WP_062913500.1|28680_29649_-	replication initiator protein A	NA	M1PFC4	Streptococcus_phage	38.5	4.0e-12
WP_062913501.1|29841_31233_+	amino acid permease	NA	NA	NA	NA	NA
WP_041142899.1|31498_31681_+	hypothetical protein	NA	A0A2P0ZLG6	Lactobacillus_phage	70.2	1.9e-08
WP_020923847.1|31881_32160_-	BRCT domain-containing protein	NA	NA	NA	NA	NA
WP_062913502.1|33019_33820_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	50.2	8.0e-67
WP_062913503.1|33821_34169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062913504.1|34260_34935_+	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	32.9	2.8e-28
>prophage 5
NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	40553	38347	38935	40553		Vibrio_phage(100.0%)	1	NA	NA
WP_062913505.1|38347_38935_-	recombinase family protein	NA	M4QQC6	Vibrio_phage	42.4	5.9e-19
