bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	1.1|234384|34|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	34	0	0	1	34	1179132	1179099	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1179099-1179132	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	1.1|234384|34|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	34	0	0	1	34	1303579	1303546	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1303546-1303579	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	1.1|234384|34|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	34	0	0	1	34	1391049	1391082	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1391049-1391082	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	1.1|234384|34|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	97.06	34	1	0	1	34	130395	130362	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-09	52.3	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	130362-130395	ATGGGCCCCAACAAAGAGGAATTGGATTCCCAAT	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	1.1|234384|34|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	94.12	34	2	0	1	34	993812	993845	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	3e-08	49.1	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	993812-993845	ATTGGAAATCCAATTCCTCTTTGTTGGGGCCCAT	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	29	0	0	1	29	1091025	1090997	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-08	47.5	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1090997-1091025	TTTCGAAAAGAAATTCTACAAACAATGCA	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	29	0	0	1	29	2638449	2638477	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-08	47.5	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2638449-2638477	TGCATTGTTTGTAGAATTTCTTTTCGAAA	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	96.55	29	1	0	1	29	249678	249650	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	249650-249678	TTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	96.55	29	1	0	1	29	328426	328398	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	328398-328426	TTTCGAAAAGAAATTCTACAAGCAATGCA	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	96.55	29	1	0	1	29	1569738	1569766	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1569738-1569766	TGCATTGTCTGTAGAATTTCTTTTCGAAA	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	96.55	29	1	0	1	29	1690805	1690777	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1690777-1690805	TTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	96.55	29	1	0	1	29	1745998	1745970	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1745970-1745998	TTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	130295	130267	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	130267-130295	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	130352	130324	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	130324-130352	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	234426	234454	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	234426-234454	TGCATTGCCTGTAGAATTTCTTTTCGAAA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	993855	993883	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	993855-993883	TGCATTGCCTGTAGAATTTCTTTTCGAAA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	1179090	1179062	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1179062-1179090	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	1903836	1903864	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1903836-1903864	TGCATTGTCTGTAGAATTTCCTTTCGAAA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	2202914	2202942	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2202914-2202942	TGCATTGTCTGTAGAATTTCTTTTTGAAA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	2393795	2393767	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2393767-2393795	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	2.1|771661|29|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.10	29	2	0	1	29	2393852	2393824	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2393824-2393852	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	3.1|777154|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	32	0	0	1	32	1020411	1020442	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	3e-09	52.3	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1020411-1020442	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	3.1|777154|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	32	0	0	1	32	1303478	1303447	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	3e-09	52.3	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1303447-1303478	GAATTTCGAAAAGAAATTCTACAGGCAATGCG	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	3.1|777154|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	32	0	0	1	32	1391150	1391181	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	3e-09	52.3	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1391150-1391181	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	3.1|777154|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	100.00	32	0	0	1	32	1894428	1894459	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	3e-09	52.3	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1894428-1894459	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	0
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	3.1|777154|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	96.88	32	1	0	1	32	1602302	1602333	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	3e-08	49.1	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1602302-1602333	CGCATTGCCTGTAGAATTTCTTTACGAAATTC	1
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	234485	234516	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	234485-234516	GCACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	328312	328281	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	328281-328312	AGCTGACGAAAAGTCAGCTTACAATAATGTGC	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	993913	993944	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	993913-993944	GCACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	994028	994059	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	994028-994059	GCACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	1095106	1095075	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	1095075-1095106	AGCTGACGAAAAGTCAGCTTACAATAATGTGC	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	1179031	1179000	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	1179000-1179031	AGCTGACGAAAAGTCAGCTTACAATAATGTGC	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	1303536	1303505	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	1303505-1303536	AGCTGACGAAAAGTCAGCTTACAATAATGTGC	2
NZ_CP012979	Staphylococcus aureus strain ST20130940 chromosome, complete genome	5.1|1602361|32|NZ_CP012979|CRISPRCasFinder	NZ_CP012979.1	Staphylococcus aureus strain ST20130940 chromosome, complete genome	93.75	32	2	0	1	32	1391092	1391123	234360-234441|771635-771715|777128-777211|784298-784523|1602334-1602419|1688470-1688552|2353024-2353121	2e-07	46.0	1.0	GCACATTATTGAAAGCTGACTTTTGGTCAGCT	1391092-1391123	GCACATTATTGTAAGCTGACTTTTCGTCAGCT	2
