The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	721562	729383	2749890		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|721562_722618_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|722617_723304_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|723278_723752_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093556.1|724094_724535_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|724814_725399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|725497_726211_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|726214_726634_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|726635_727304_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|727654_728248_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217793.1|728231_729383_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.7e-23
>prophage 2
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	741354	755641	2749890		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|741354_742413_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197271.1|742707_743250_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|743817_744735_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031918684.1|744825_744927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193757.1|745005_746511_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|746851_747352_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068504.1|747371_748238_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|749038_749437_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|749399_751505_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562501.1|751622_752594_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	5.5e-171
WP_000499195.1|752774_752930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|752968_753940_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245574.1|753926_754883_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616862.1|754879_755641_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	3.8e-18
>prophage 3
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	926822	969036	2749890	protease,bacteriocin,tRNA,transposase	Streptococcus_phage(40.0%)	38	NA	NA
WP_000448941.1|926822_927812_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|928107_928503_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|928873_929593_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959284.1|929713_930700_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082730.1|930747_932556_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	2.7e-46
WP_000896697.1|933017_933824_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214068.1|933846_934212_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224622.1|934315_934909_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_062909774.1|935094_935442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|935458_936094_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|936110_936920_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669923.1|936916_937771_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062419.1|937791_939177_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395151.1|939186_941031_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|941265_942036_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|942229_943315_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570687.1|943656_945225_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_001288680.1|945369_946128_+	esterase family protein	NA	NA	NA	NA	NA
WP_001060548.1|946291_947017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031918646.1|947018_947870_+	base excision DNA repair protein	NA	NA	NA	NA	NA
WP_000251964.1|947994_948171_+|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.9	4.5e-07
WP_000600390.1|948828_949338_+	YjcG family protein	NA	NA	NA	NA	NA
WP_001154224.1|949450_950641_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|950618_951794_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340119.1|952226_953711_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|953691_953952_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049957.1|953951_955514_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
WP_000928411.1|955815_956619_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_072470629.1|956837_959162_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021865.1|959178_960537_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414178.1|960675_962187_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000876826.1|963451_963670_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668823.1|963750_964737_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|964935_965112_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|965126_965729_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001790623.1|966644_966746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072470685.1|966755_967028_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870802.1|967071_969036_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
>prophage 4
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	1001276	1009749	2749890		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861574.1|1001276_1001759_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010406.1|1001745_1002870_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1002873_1003578_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1003577_1003841_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1003842_1004514_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032746.1|1004506_1006696_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	4.6e-141
WP_000483713.1|1006674_1008159_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030821.1|1008151_1009180_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	2.9e-61
WP_000238664.1|1009182_1009749_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	1546793	1555105	2749890	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1546793_1547579_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1547704_1548595_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062180.1|1548604_1549951_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000683930.1|1550064_1551165_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|1551167_1551845_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1551975_1553082_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217262.1|1553305_1555105_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	1.0e-53
>prophage 6
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	1622822	1631865	2749890	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364545.1|1622822_1623341_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	6.2e-28
WP_031918693.1|1623362_1625636_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.1	1.1e-63
WP_000749795.1|1625838_1628118_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1628392_1628653_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1628671_1629811_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1629833_1630859_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1630860_1631865_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	1756086	1828327	2749890	protease,tRNA,transposase	Staphylococcus_phage(96.55%)	68	NA	NA
WP_062909793.1|1756086_1762647_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	96.0	1.3e-303
WP_000836465.1|1762972_1763284_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001804761.1|1763305_1765723_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_062909794.1|1766007_1767192_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1767301_1768255_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1768251_1768815_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1768934_1769336_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1769906_1770734_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1770736_1770856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1770967_1771969_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1772090_1772555_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159033.1|1772567_1773749_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	5.1e-227
WP_000493888.1|1773759_1774392_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	100.0	3.4e-113
WP_062909795.1|1774398_1775442_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	7.7e-195
WP_001261669.1|1775922_1777425_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221185.1|1777949_1778264_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	99.0	4.4e-53
WP_000989120.1|1778263_1779556_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	1.9e-227
WP_000163235.1|1779573_1779969_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|1780263_1781118_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_062909796.1|1781393_1781618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1781816_1782287_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1782399_1782843_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030463.1|1782829_1783273_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	100.0	3.7e-58
WP_001168904.1|1783568_1784204_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1784643_1785357_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1785616_1785919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200540.1|1786174_1786540_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	4.8e-59
WP_000623479.1|1786536_1786890_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	92.3	8.2e-16
WP_000453312.1|1787273_1788107_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	2.1e-158
WP_000366155.1|1788318_1789227_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.0	1.7e-137
WP_000933822.1|1789351_1790545_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109906.1|1790915_1792508_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_072470674.1|1792885_1793632_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	99.2	8.3e-143
WP_000672014.1|1793636_1794110_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1794175_1794433_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778534.1|1794429_1795431_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	96.7	7.7e-184
WP_062909797.1|1795435_1796914_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	6.9e-282
WP_072470673.1|1797072_1797528_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.2e-78
WP_072470537.1|1797830_1798481_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	70.7	1.8e-32
WP_000070641.1|1798561_1799557_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	95.2	7.9e-72
WP_000669026.1|1799631_1800258_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	96.2	3.5e-94
WP_000627537.1|1800298_1800640_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
WP_000414215.1|1800740_1801313_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
WP_001801861.1|1802668_1802764_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1802886_1802988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047230715.1|1804063_1805293_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.2	5.8e-133
WP_062909798.1|1805285_1806842_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	98.1	5.2e-288
WP_001038689.1|1807207_1807927_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	3.2e-131
WP_001038759.1|1808076_1808793_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_102957303.1|1808894_1809002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038694.1|1808950_1809670_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	97.9	1.2e-127
WP_001038869.1|1809791_1810511_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	6.0e-130
WP_001039443.1|1810568_1811291_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	1.9e-131
WP_025174267.1|1811415_1812123_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.4	3.9e-126
WP_001092753.1|1813085_1813652_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	99.5	7.3e-99
WP_000586140.1|1814125_1814824_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|1814820_1815582_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|1815578_1816271_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|1816293_1817667_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|1817676_1818195_-	flavoprotein	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566594.1|1818210_1819455_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	99.8	1.5e-237
WP_031918769.1|1819447_1822441_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.2	0.0e+00
WP_000416756.1|1822505_1822649_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000416758.1|1823384_1823528_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	78.7	2.0e-13
WP_000782463.1|1823950_1824934_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_062909799.1|1824935_1825871_-	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	99.3	1.3e-172
WP_000209099.1|1827232_1828021_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.0	1.3e-138
WP_001792814.1|1828198_1828327_+|transposase	IS3 family transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	66.7	6.6e-08
>prophage 8
NZ_CP012974	Staphylococcus aureus strain ST20130943 chromosome, complete genome	2749890	1929010	2014304	2749890	head,integrase,terminase,portal,capsid,tail,protease,holin	Staphylococcus_phage(91.46%)	113	1958221:1958238	2002141:2002158
WP_000827764.1|1929010_1930177_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|1930207_1930534_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669864.1|1930825_1930999_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|1930979_1931582_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|1931852_1932674_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284433.1|1932666_1934136_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	3.5e-108
WP_000897640.1|1934319_1935396_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|1935415_1936210_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|1936281_1936389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323159.1|1936399_1937962_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275707.1|1938165_1939263_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.9	2.5e-47
WP_000149686.1|1939634_1940195_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|1940247_1941177_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|1941369_1941543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021210.1|1941594_1942974_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000205106.1|1944399_1944801_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|1945373_1945547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188077.1|1945997_1947038_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|1947094_1947937_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|1947933_1948491_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|1948550_1949075_-	membrane protein	NA	NA	NA	NA	NA
WP_000182844.1|1949195_1949759_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|1949824_1950565_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|1950564_1951437_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645728.1|1951433_1952114_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991301.1|1952114_1953011_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|1953007_1953388_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|1953646_1953823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|1954065_1954164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068523.1|1954363_1955650_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_001792929.1|1955928_1956219_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001804879.1|1956229_1957663_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
1958221:1958238	attL	TGTATCCAAACTGGGGAC	NA	NA	NA	NA
WP_000669789.1|1958620_1958800_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|1959110_1959371_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702262.1|1959423_1959774_-	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_000727643.1|1960455_1960905_+	chemotaxis-inhibiting protein CHIPS	NA	A7TWR9	Staphylococcus_phage	100.0	1.5e-78
WP_000920037.1|1961984_1962476_-	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	100.0	3.6e-86
WP_000861038.1|1962666_1963422_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|1963433_1963688_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|1963739_1963847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|1963899_1964076_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000539688.1|1964225_1964522_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_062909805.1|1964579_1964867_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	98.9	3.8e-43
WP_001153681.1|1964913_1965066_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582137.1|1965055_1968841_-	hypothetical protein	NA	A0A1P8L6B8	Staphylococcus_phage	100.0	0.0e+00
WP_029549971.1|1968856_1970347_-|tail	phage tail family protein	tail	D2JLF8	Staphylococcus_phage	99.8	8.2e-299
WP_001133528.1|1970346_1974999_-|tail	phage tail tape measure protein	tail	Q8SDK4	Staphylococcus_phage	100.0	0.0e+00
WP_000570353.1|1975054_1975177_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	100.0	6.9e-15
WP_000442601.1|1975236_1975683_-	hypothetical protein	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
WP_000570652.1|1975747_1976701_-	Ig-like domain-containing protein	NA	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
WP_000611452.1|1976701_1977082_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
WP_000501244.1|1977078_1977456_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_000975314.1|1977455_1977791_-|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
WP_001177486.1|1977777_1978110_-|head,tail	phage head-tail connector protein	head,tail	A0A1W6JPZ6	Staphylococcus_phage	100.0	2.1e-58
WP_001252099.1|1978118_1978277_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_000849950.1|1978312_1979560_-|capsid	phage major capsid protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
WP_000032525.1|1979647_1980232_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
WP_000511067.1|1980224_1981475_-|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	100.0	4.4e-237
WP_000365300.1|1981480_1981681_-	hypothetical protein	NA	D2JLE5	Staphylococcus_phage	100.0	1.0e-26
WP_000133304.1|1981694_1983389_-|terminase	phage terminase large subunit	terminase	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
WP_000919026.1|1983391_1983859_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
WP_000817289.1|1983988_1984333_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	4.2e-65
WP_000406194.1|1984348_1984801_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	A0A1W6JQ01	Staphylococcus_phage	100.0	3.6e-80
WP_000282748.1|1984915_1985386_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	100.0	3.7e-72
WP_001794311.1|1985408_1985609_-	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	100.0	1.4e-28
WP_000595265.1|1985608_1985758_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195759.1|1985754_1985961_-	DUF1381 domain-containing protein	NA	A0A1W6JPY0	Staphylococcus_phage	100.0	1.9e-20
WP_001209216.1|1985977_1986151_-	hypothetical protein	NA	A0A1W6JQ45	Staphylococcus_phage	100.0	4.7e-25
WP_001066448.1|1986187_1986724_-	dUTP diphosphatase	NA	A0A1W6JQ21	Staphylococcus_phage	100.0	9.4e-96
WP_000714407.1|1986716_1986887_-	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	100.0	5.7e-23
WP_001065078.1|1986873_1987128_-	DUF1024 family protein	NA	A0A1W6JQ06	Staphylococcus_phage	100.0	1.9e-38
WP_000219085.1|1987120_1987510_-	acetyltransferase	NA	A0A1W6JPV7	Staphylococcus_phage	100.0	3.5e-68
WP_000982695.1|1987506_1987854_-	hypothetical protein	NA	A0A1W6JPZ1	Staphylococcus_phage	100.0	5.9e-59
WP_001126839.1|1987917_1988166_-	hypothetical protein	NA	A0A1W6JPX8	Staphylococcus_phage	100.0	2.5e-43
WP_001029545.1|1988166_1988538_-	hypothetical protein	NA	A0A1W6JPY5	Staphylococcus_phage	100.0	7.5e-52
WP_001187234.1|1988538_1988724_-	DUF3113 family protein	NA	A0A1W6JPY2	Staphylococcus_phage	100.0	8.3e-28
WP_000049804.1|1988728_1989133_-	DUF1064 domain-containing protein	NA	A0A1W6JPX0	Staphylococcus_phage	100.0	3.6e-68
WP_001123674.1|1989143_1989365_-	DUF3269 family protein	NA	A0A1W6JQ35	Staphylococcus_phage	100.0	1.7e-35
WP_000256589.1|1989377_1989536_-	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_000803062.1|1989529_1990309_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000190253.1|1990318_1991089_-	conserved phage C-terminal domain-containing protein	NA	A0A1W6JQ00	Staphylococcus_phage	100.0	6.4e-122
WP_000414755.1|1991154_1991436_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001081076.1|1991428_1991578_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_001199416.1|1991574_1992246_-	hypothetical protein	NA	Q8SDM2	Staphylococcus_phage	100.0	4.4e-127
WP_000704705.1|1992258_1992810_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_000137070.1|1992840_1993620_-	ATP-binding protein	NA	A0A1W6JPW0	Staphylococcus_phage	100.0	3.3e-142
WP_000815404.1|1993612_1993834_-	DUF2483 domain-containing protein	NA	A0A1W6JQ25	Staphylococcus_phage	100.0	9.3e-34
WP_000291489.1|1993843_1994104_-	DUF1108 family protein	NA	A0A1W6JQ03	Staphylococcus_phage	100.0	7.6e-43
WP_000066020.1|1994196_1994358_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120197.1|1994354_1994675_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|1994733_1995366_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_000939496.1|1995380_1995521_-	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_001148861.1|1995551_1995749_-	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_001148337.1|1995764_1996514_-	phage antirepressor KilAC domain-containing protein	NA	Q8SDM9	Staphylococcus_phage	99.6	4.4e-136
WP_000351243.1|1996570_1997110_+	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_000435341.1|1997133_1997394_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_001148572.1|1997406_1998204_-	phage antirepressor Ant	NA	Q6R854	Staphylococcus_virus	99.6	1.1e-145
WP_001153965.1|1998360_1998669_-	hypothetical protein	NA	S4V9P0	Staphylococcus_phage	100.0	1.3e-49
WP_001198673.1|1998683_1998902_-	helix-turn-helix transcriptional regulator	NA	Q8SDX1	Staphylococcus_phage	100.0	2.9e-35
WP_062909806.1|1999043_1999763_+	helix-turn-helix transcriptional regulator	NA	Q8SDX2	Staphylococcus_phage	98.7	9.2e-131
WP_000694772.1|1999962_2000145_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_001013104.1|2000180_2000327_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|2000323_2000938_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_043951427.1|2001045_2002083_+|integrase	site-specific integrase	integrase	A7TWL3	Staphylococcus_phage	99.7	1.7e-178
WP_000595401.1|2003464_2004481_-	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
2002141:2002158	attR	TGTATCCAAACTGGGGAC	NA	NA	NA	NA
WP_000791404.1|2004502_2005555_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	2.5e-36
WP_000206635.1|2005990_2007214_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000812008.1|2007586_2008432_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000825510.1|2008493_2009405_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001045079.1|2009565_2010873_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|2011408_2013025_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2013100_2013385_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197635.1|2013560_2014304_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
