assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001618825.1_ASM161882v1	NZ_CP015062	Mesorhizobium ciceri strain CC1192 chromosome, complete genome	1	1086648-1086730	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL	Orphan	GCGATCAGCAAAAGTGGTTTCCGGTTT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL	NA,NA	NA|332aa|up_9|NZ_CP015062.1_1073108_1074104_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|347aa|up_8|NZ_CP015062.1_1074249_1075290_-	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily	NA|255aa|up_7|NZ_CP015062.1_1075329_1076094_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|389aa|up_6|NZ_CP015062.1_1076090_1077257_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|393aa|up_5|NZ_CP015062.1_1077478_1078657_+	TIGR02993, ectoine_eutD, ectoine utilization protein EutD	NA|410aa|up_4|NZ_CP015062.1_1078643_1079873_+	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|435aa|up_3|NZ_CP015062.1_1079922_1081227_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|156aa|up_2|NZ_CP015062.1_1081377_1081845_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|1125aa|up_1|NZ_CP015062.1_1081940_1085315_+	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|418aa|up_0|NZ_CP015062.1_1085321_1086575_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|548aa|down_0|NZ_CP015062.1_1086860_1088504_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|279aa|down_1|NZ_CP015062.1_1088549_1089386_+	cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like proteins, Lipid A 1-phosphatase subfamily	NA|367aa|down_2|NZ_CP015062.1_1089453_1090554_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|217aa|down_3|NZ_CP015062.1_1090803_1091454_-	COG2808, PaiB, Transcriptional regulator [Transcription]	NA|225aa|down_4|NZ_CP015062.1_1091475_1092150_-	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|388aa|down_5|NZ_CP015062.1_1092386_1093550_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|506aa|down_6|NZ_CP015062.1_1093792_1095310_+	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|252aa|down_7|NZ_CP015062.1_1095337_1096093_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|423aa|down_8|NZ_CP015062.1_1096112_1097381_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|414aa|down_9|NZ_CP015062.1_1097566_1098808_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_001618825.1_ASM161882v1	NZ_CP015062	Mesorhizobium ciceri strain CC1192 chromosome, complete genome	2	2261520-2261620	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL	Orphan	CGCCTAGGCGATTGGTCCCGCAAGCGGGGCCAATCGT	37	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL	NA|94aa|up_5|NZ_CP015062.1_2257025_2257307_-,NA|416aa|up_2|NZ_CP015062.1_2259027_2260275_+,NA|98aa|up_1|NZ_CP015062.1_2260380_2260674_-,NA|60aa|down_8|NZ_CP015062.1_2270217_2270397_-	NA|491aa|up_9|NZ_CP015062.1_2252852_2254325_+	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|404aa|up_8|NZ_CP015062.1_2254359_2255571_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|134aa|up_7|NZ_CP015062.1_2255755_2256157_-	COG4991, COG4991, Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown]	NA|192aa|up_6|NZ_CP015062.1_2256397_2256973_+	COG3548, COG3548, Predicted integral membrane protein [Function unknown]	NA|94aa|up_5|NZ_CP015062.1_2257025_2257307_-	NA	NA|289aa|up_4|NZ_CP015062.1_2257469_2258336_+	PRK06194, PRK06194, hypothetical protein; Provisional	NA|142aa|up_3|NZ_CP015062.1_2258339_2258765_-	pfam04120, Iron_permease, Low affinity iron permease	NA|416aa|up_2|NZ_CP015062.1_2259027_2260275_+	NA	NA|98aa|up_1|NZ_CP015062.1_2260380_2260674_-	NA	NA|214aa|up_0|NZ_CP015062.1_2260864_2261506_-	TIGR03308, phn_thr-fam, phosphonate metabolism protein, transferase hexapeptide repeat family	NA|173aa|down_0|NZ_CP015062.1_2261644_2262163_-	COG3045, CreA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|193aa|down_1|NZ_CP015062.1_2262351_2262930_+	COG1999, COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]	NA|291aa|down_2|NZ_CP015062.1_2262940_2263813_+	COG2264, PrmA, Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]	NA|615aa|down_3|NZ_CP015062.1_2263951_2265796_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|99aa|down_4|NZ_CP015062.1_2265979_2266276_-	COG4541, COG4541, Predicted membrane protein [Function unknown]	NA|243aa|down_5|NZ_CP015062.1_2266272_2267001_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|231aa|down_6|NZ_CP015062.1_2267158_2267851_-	COG5587, COG5587, Uncharacterized conserved protein [Function unknown]	NA|735aa|down_7|NZ_CP015062.1_2267850_2270055_-	COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]	NA|60aa|down_8|NZ_CP015062.1_2270217_2270397_-	NA	NA|558aa|down_9|NZ_CP015062.1_2270493_2272167_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]
GCF_001618825.1_ASM161882v1	NZ_CP015062	Mesorhizobium ciceri strain CC1192 chromosome, complete genome	3	3637039-3637137	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL	Orphan	GCCATCGCCGCCACCGCCGCCGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL	NA,NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA|440aa|up_9|NZ_CP015062.1_3622760_3624080_+	TIGR02643, Thymidine_phosphorylase, thymidine phosphorylase	NA|188aa|up_8|NZ_CP015062.1_3624166_3624730_-	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|210aa|up_7|NZ_CP015062.1_3624954_3625584_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|325aa|up_6|NZ_CP015062.1_3625730_3626705_-	TIGR01430, Putative_adenosine/adenine_deaminase, adenosine deaminase	NA|259aa|up_5|NZ_CP015062.1_3626839_3627616_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|525aa|up_4|NZ_CP015062.1_3627686_3629261_+	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase	NA|86aa|up_3|NZ_CP015062.1_3629342_3629600_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|141aa|up_2|NZ_CP015062.1_3629602_3630025_+	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|411aa|up_1|NZ_CP015062.1_3630021_3631254_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|193aa|up_0|NZ_CP015062.1_3631339_3631918_-	COG5342, COG5342, Invasion protein B, involved in pathogenesis [General function prediction only]	NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA	NA|157aa|down_1|NZ_CP015062.1_3641099_3641570_+	cd04666, Nudix_Hydrolase_9, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|284aa|down_2|NZ_CP015062.1_3641574_3642426_-	PRK06224, PRK06224, citryl-CoA lyase	NA|395aa|down_3|NZ_CP015062.1_3642422_3643607_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|508aa|down_4|NZ_CP015062.1_3643622_3645146_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|179aa|down_5|NZ_CP015062.1_3645150_3645687_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|325aa|down_6|NZ_CP015062.1_3645826_3646801_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|255aa|down_7|NZ_CP015062.1_3646984_3647749_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|178aa|down_8|NZ_CP015062.1_3647890_3648424_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|152aa|down_9|NZ_CP015062.1_3648626_3649082_+	COG3556, COG3556, Predicted membrane protein [Function unknown]
GCF_001618825.1_ASM161882v1	NZ_CP015062	Mesorhizobium ciceri strain CC1192 chromosome, complete genome	4	3637393-3637475	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL	Orphan	GCCATCGCCGCCACCGCCGCCGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL	NA,NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA|440aa|up_9|NZ_CP015062.1_3622760_3624080_+	TIGR02643, Thymidine_phosphorylase, thymidine phosphorylase	NA|188aa|up_8|NZ_CP015062.1_3624166_3624730_-	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|210aa|up_7|NZ_CP015062.1_3624954_3625584_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|325aa|up_6|NZ_CP015062.1_3625730_3626705_-	TIGR01430, Putative_adenosine/adenine_deaminase, adenosine deaminase	NA|259aa|up_5|NZ_CP015062.1_3626839_3627616_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|525aa|up_4|NZ_CP015062.1_3627686_3629261_+	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase	NA|86aa|up_3|NZ_CP015062.1_3629342_3629600_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|141aa|up_2|NZ_CP015062.1_3629602_3630025_+	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|411aa|up_1|NZ_CP015062.1_3630021_3631254_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|193aa|up_0|NZ_CP015062.1_3631339_3631918_-	COG5342, COG5342, Invasion protein B, involved in pathogenesis [General function prediction only]	NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA	NA|157aa|down_1|NZ_CP015062.1_3641099_3641570_+	cd04666, Nudix_Hydrolase_9, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|284aa|down_2|NZ_CP015062.1_3641574_3642426_-	PRK06224, PRK06224, citryl-CoA lyase	NA|395aa|down_3|NZ_CP015062.1_3642422_3643607_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|508aa|down_4|NZ_CP015062.1_3643622_3645146_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|179aa|down_5|NZ_CP015062.1_3645150_3645687_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|325aa|down_6|NZ_CP015062.1_3645826_3646801_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|255aa|down_7|NZ_CP015062.1_3646984_3647749_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|178aa|down_8|NZ_CP015062.1_3647890_3648424_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|152aa|down_9|NZ_CP015062.1_3648626_3649082_+	COG3556, COG3556, Predicted membrane protein [Function unknown]
GCF_001618825.1_ASM161882v1	NZ_CP015062	Mesorhizobium ciceri strain CC1192 chromosome, complete genome	5	3638437-3638526	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL	Orphan	GCCGCCAGTGCCGCCGCCACCGCCGA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL	NA,NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA|440aa|up_9|NZ_CP015062.1_3622760_3624080_+	TIGR02643, Thymidine_phosphorylase, thymidine phosphorylase	NA|188aa|up_8|NZ_CP015062.1_3624166_3624730_-	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|210aa|up_7|NZ_CP015062.1_3624954_3625584_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|325aa|up_6|NZ_CP015062.1_3625730_3626705_-	TIGR01430, Putative_adenosine/adenine_deaminase, adenosine deaminase	NA|259aa|up_5|NZ_CP015062.1_3626839_3627616_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|525aa|up_4|NZ_CP015062.1_3627686_3629261_+	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase	NA|86aa|up_3|NZ_CP015062.1_3629342_3629600_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|141aa|up_2|NZ_CP015062.1_3629602_3630025_+	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|411aa|up_1|NZ_CP015062.1_3630021_3631254_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|193aa|up_0|NZ_CP015062.1_3631339_3631918_-	COG5342, COG5342, Invasion protein B, involved in pathogenesis [General function prediction only]	NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA	NA|157aa|down_1|NZ_CP015062.1_3641099_3641570_+	cd04666, Nudix_Hydrolase_9, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|284aa|down_2|NZ_CP015062.1_3641574_3642426_-	PRK06224, PRK06224, citryl-CoA lyase	NA|395aa|down_3|NZ_CP015062.1_3642422_3643607_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|508aa|down_4|NZ_CP015062.1_3643622_3645146_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|179aa|down_5|NZ_CP015062.1_3645150_3645687_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|325aa|down_6|NZ_CP015062.1_3645826_3646801_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|255aa|down_7|NZ_CP015062.1_3646984_3647749_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|178aa|down_8|NZ_CP015062.1_3647890_3648424_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|152aa|down_9|NZ_CP015062.1_3648626_3649082_+	COG3556, COG3556, Predicted membrane protein [Function unknown]
GCF_001618825.1_ASM161882v1	NZ_CP015062	Mesorhizobium ciceri strain CC1192 chromosome, complete genome	6	3638782-3638879	6	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL	Orphan	GCCGCCAGTGCCGCCGCCACCGCCGA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL	NA,NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA|440aa|up_9|NZ_CP015062.1_3622760_3624080_+	TIGR02643, Thymidine_phosphorylase, thymidine phosphorylase	NA|188aa|up_8|NZ_CP015062.1_3624166_3624730_-	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|210aa|up_7|NZ_CP015062.1_3624954_3625584_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|325aa|up_6|NZ_CP015062.1_3625730_3626705_-	TIGR01430, Putative_adenosine/adenine_deaminase, adenosine deaminase	NA|259aa|up_5|NZ_CP015062.1_3626839_3627616_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|525aa|up_4|NZ_CP015062.1_3627686_3629261_+	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase	NA|86aa|up_3|NZ_CP015062.1_3629342_3629600_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|141aa|up_2|NZ_CP015062.1_3629602_3630025_+	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|411aa|up_1|NZ_CP015062.1_3630021_3631254_+	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	NA|193aa|up_0|NZ_CP015062.1_3631339_3631918_-	COG5342, COG5342, Invasion protein B, involved in pathogenesis [General function prediction only]	NA|103aa|down_0|NZ_CP015062.1_3640664_3640973_+	NA	NA|157aa|down_1|NZ_CP015062.1_3641099_3641570_+	cd04666, Nudix_Hydrolase_9, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|284aa|down_2|NZ_CP015062.1_3641574_3642426_-	PRK06224, PRK06224, citryl-CoA lyase	NA|395aa|down_3|NZ_CP015062.1_3642422_3643607_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|508aa|down_4|NZ_CP015062.1_3643622_3645146_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|179aa|down_5|NZ_CP015062.1_3645150_3645687_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|325aa|down_6|NZ_CP015062.1_3645826_3646801_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|255aa|down_7|NZ_CP015062.1_3646984_3647749_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|178aa|down_8|NZ_CP015062.1_3647890_3648424_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|152aa|down_9|NZ_CP015062.1_3648626_3649082_+	COG3556, COG3556, Predicted membrane protein [Function unknown]
