assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	1	34589-34682	1	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Orphan	CCGTCGCTGGCCGGCCTGACGCAGC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA|123aa|up_4|NZ_CP015249.1_25808_26177_+,NA|330aa|up_2|NZ_CP015249.1_26978_27968_-,NA|432aa|down_3|NZ_CP015249.1_38003_39299_+,NA|349aa|down_4|NZ_CP015249.1_39415_40462_+	NA|748aa|up_9|NZ_CP015249.1_16117_18361_+	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|344aa|up_8|NZ_CP015249.1_18399_19431_+	pfam10503, Esterase_phd, Esterase PHB depolymerase	NA|1095aa|up_7|NZ_CP015249.1_19486_22771_+	pfam12860, PAS_7, PAS fold	NA|225aa|up_6|NZ_CP015249.1_22809_23484_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|609aa|up_5|NZ_CP015249.1_23582_25409_+	pfam10605, 3HBOH, 3HB-oligomer hydrolase (3HBOH)	NA|123aa|up_4|NZ_CP015249.1_25808_26177_+	NA	NA|243aa|up_3|NZ_CP015249.1_26253_26982_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|330aa|up_2|NZ_CP015249.1_26978_27968_-	NA	NA|748aa|up_1|NZ_CP015249.1_28107_30351_+	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region	NA|803aa|up_0|NZ_CP015249.1_30442_32851_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|289aa|down_0|NZ_CP015249.1_35114_35981_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|224aa|down_1|NZ_CP015249.1_36215_36887_-	pfam03695, UPF0149, Uncharacterized protein family (UPF0149)	NA|257aa|down_2|NZ_CP015249.1_36879_37650_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|432aa|down_3|NZ_CP015249.1_38003_39299_+	NA	NA|349aa|down_4|NZ_CP015249.1_39415_40462_+	NA	NA|338aa|down_5|NZ_CP015249.1_40892_41906_+	PRK10534, PRK10534, L-threonine aldolase; Provisional	NA|681aa|down_6|NZ_CP015249.1_41887_43930_-	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|224aa|down_7|NZ_CP015249.1_43970_44642_-	pfam05036, SPOR, Sporulation related domain	NA|252aa|down_8|NZ_CP015249.1_44717_45473_-	PRK13322, PRK13322, pantothenate kinase; Reviewed	NA|328aa|down_9|NZ_CP015249.1_45469_46453_-	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	2	544543-544890	1	CRT	no		cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Orphan	GANCNNGCCGTTGACGGT	18	0	0	NA	NA	NA	6	6	Orphan	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA|477aa|up_2|NZ_CP015249.1_541158_542589_-,NA|66aa|up_0|NZ_CP015249.1_544033_544231_-,NA	NA|483aa|up_9|NZ_CP015249.1_523856_525305_-	cd09129, PLDc_unchar2_1, Putative catalytic domain, repeat 1, of uncharacterized phospholipase D-like proteins	NA|1484aa|up_8|NZ_CP015249.1_525474_529926_-	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|831aa|up_7|NZ_CP015249.1_530070_532563_-	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|336aa|up_6|NZ_CP015249.1_532671_533679_-	pfam13593, SBF_like, SBF-like CPA transporter family (DUF4137)	NA|767aa|up_5|NZ_CP015249.1_534521_536822_+	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|343aa|up_4|NZ_CP015249.1_537020_538049_-	cd01049, RNRR2, Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain	NA|827aa|up_3|NZ_CP015249.1_538156_540637_-	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha	NA|477aa|up_2|NZ_CP015249.1_541158_542589_-	NA	NA|410aa|up_1|NZ_CP015249.1_542779_544009_+	COG2715, SpmA, Uncharacterized membrane protein, required for spore maturation in B	NA|66aa|up_0|NZ_CP015249.1_544033_544231_-	NA	NA|510aa|down_0|NZ_CP015249.1_545189_546719_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|385aa|down_1|NZ_CP015249.1_546718_547873_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|447aa|down_2|NZ_CP015249.1_548006_549347_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|113aa|down_3|NZ_CP015249.1_549357_549696_-	pfam08850, DUF1820, Domain of unknown function (DUF1820)	NA|573aa|down_4|NZ_CP015249.1_550046_551765_+	pfam08811, DUF1800, Protein of unknown function (DUF1800)	NA|477aa|down_5|NZ_CP015249.1_551862_553293_+	COG4102, COG4102, Uncharacterized protein conserved in bacteria [Function unknown]	NA|186aa|down_6|NZ_CP015249.1_553299_553857_-	PRK10634, PRK10634, L-threonylcarbamoyladenylate synthase type 1 TsaC	NA|834aa|down_7|NZ_CP015249.1_553888_556390_-	PRK08780, PRK08780, DNA topoisomerase I; Provisional	NA|381aa|down_8|NZ_CP015249.1_556598_557741_-	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|385aa|down_9|NZ_CP015249.1_557852_559007_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	3	999829-999911	2	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Orphan	ATCGCCGTCGTCGGCCGCATCGCCG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA|574aa|up_3|NZ_CP015249.1_992394_994116_+,NA|287aa|up_1|NZ_CP015249.1_995518_996379_-,NA|116aa|down_2|NZ_CP015249.1_1001377_1001725_-	NA|401aa|up_9|NZ_CP015249.1_983784_984987_+	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|164aa|up_8|NZ_CP015249.1_984983_985475_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|256aa|up_7|NZ_CP015249.1_985553_986321_+	pfam01203, T2SSN, Type II secretion system (T2SS), protein N	NA|271aa|up_6|NZ_CP015249.1_986334_987147_+	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases	NA|788aa|up_5|NZ_CP015249.1_987353_989717_+	PRK09466, metL, bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional	NA|792aa|up_4|NZ_CP015249.1_989815_992191_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|574aa|up_3|NZ_CP015249.1_992394_994116_+	NA	NA|402aa|up_2|NZ_CP015249.1_994304_995510_-	pfam16024, DUF4785, Domain of unknown function (DUF4785)	NA|287aa|up_1|NZ_CP015249.1_995518_996379_-	NA	NA|194aa|up_0|NZ_CP015249.1_996511_997093_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|162aa|down_0|NZ_CP015249.1_999986_1000472_+	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown]	NA|220aa|down_1|NZ_CP015249.1_1000468_1001128_-	PRK15087, PRK15087, hemolysin; Provisional	NA|116aa|down_2|NZ_CP015249.1_1001377_1001725_-	NA	NA|276aa|down_3|NZ_CP015249.1_1001901_1002729_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|338aa|down_4|NZ_CP015249.1_1002788_1003802_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|530aa|down_5|NZ_CP015249.1_1004147_1005737_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|378aa|down_6|NZ_CP015249.1_1005754_1006888_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II	NA|37aa|down_7|NZ_CP015249.1_1006898_1007009_+	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|583aa|down_8|NZ_CP015249.1_1007087_1008836_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|564aa|down_9|NZ_CP015249.1_1008832_1010524_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	4	2024419-2026069	1,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Type I-F	GCTCACTGCCGCGCAGGCAGCTCAGAAA,GCTCACTGCCGCGCAGGCAGCTCAGAAA,GCTCACTGCCGCGCAGGCAGCTCAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	26,27,27	27	TypeI-F	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA|173aa|up_6|NZ_CP015249.1_2014903_2015422_+,NA|119aa|down_0|NZ_CP015249.1_2026722_2027079_+,NA|93aa|down_2|NZ_CP015249.1_2028390_2028669_+,NA|208aa|down_3|NZ_CP015249.1_2028850_2029474_-,NA|170aa|down_4|NZ_CP015249.1_2029554_2030064_-,NA|215aa|down_5|NZ_CP015249.1_2030275_2030920_-,NA|267aa|down_7|NZ_CP015249.1_2031636_2032437_-,NA|145aa|down_8|NZ_CP015249.1_2032601_2033036_-	NA|158aa|up_9|NZ_CP015249.1_2012380_2012854_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|425aa|up_8|NZ_CP015249.1_2012850_2014125_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|185aa|up_7|NZ_CP015249.1_2014190_2014745_+	pfam06037, DUF922, Bacterial protein of unknown function (DUF922)	NA|173aa|up_6|NZ_CP015249.1_2014903_2015422_+	NA	cas1|325aa|up_5|NZ_CP015249.1_2015867_2016842_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3f|1127aa|up_4|NZ_CP015249.1_2016838_2020219_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|453aa|up_3|NZ_CP015249.1_2020305_2021664_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|331aa|up_2|NZ_CP015249.1_2021660_2022653_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|346aa|up_1|NZ_CP015249.1_2022679_2023717_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|189aa|up_0|NZ_CP015249.1_2023721_2024288_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|119aa|down_0|NZ_CP015249.1_2026722_2027079_+	NA	NA|286aa|down_1|NZ_CP015249.1_2027339_2028197_+	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|93aa|down_2|NZ_CP015249.1_2028390_2028669_+	NA	NA|208aa|down_3|NZ_CP015249.1_2028850_2029474_-	NA	NA|170aa|down_4|NZ_CP015249.1_2029554_2030064_-	NA	NA|215aa|down_5|NZ_CP015249.1_2030275_2030920_-	NA	NA|274aa|down_6|NZ_CP015249.1_2030930_2031752_-	pfam13688, Reprolysin_5, Metallo-peptidase family M12	NA|267aa|down_7|NZ_CP015249.1_2031636_2032437_-	NA	NA|145aa|down_8|NZ_CP015249.1_2032601_2033036_-	NA	NA|1932aa|down_9|NZ_CP015249.1_2033267_2039063_-	pfam08341, TED, Thioester domain
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	5	2842101-2845828	3,4,5,2,3,4	CRT,CRISPRCasFinder,CRISPRCasFinder,PILER-CR,PILER-CR,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Type I-U,Type I-C, Type I-U?	NGTTTCAATCCACGCGCCCCTGCGGGGCGCGACN,GTTTCAATCCACGCGCCCCTGCGGGGCGCGAC,GTTTCAATCCACGCGCCCCTGCGGGGCGCGAC,GTTTCAATCCACGCGCCCCTGCGGGGCGCGAC,AGTTTCAATCCACGCGCCCCTGCGGGGCGCGACATGA,GTTTCAATCCACGCGCCCCTGCGGGGCGCGAC	34,32,32,32,37,32	0	0	NA	NA	I-C:I-C:I-C:I-C:I-C:I-C	56,53,53,27,27,27	56	TypeI-U,TypeI-C,TypeI-U?	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA|309aa|up_2|NZ_CP015249.1_2839645_2840572_-,NA|108aa|up_1|NZ_CP015249.1_2840571_2840895_-,NA	NA|775aa|up_9|NZ_CP015249.1_2828722_2831047_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|389aa|up_8|NZ_CP015249.1_2831187_2832354_+	sd00038, Kelch, Kelch repeat	NA|943aa|up_7|NZ_CP015249.1_2832550_2835379_-	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|307aa|up_6|NZ_CP015249.1_2835484_2836405_-	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains	NA|455aa|up_5|NZ_CP015249.1_2836401_2837766_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|86aa|up_4|NZ_CP015249.1_2838001_2838259_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|448aa|up_3|NZ_CP015249.1_2838260_2839604_+	cd17808, HipA_Ec_like, type II toxin-antitoxin sytem toxin HipA from Escherichia coli and similar proteins	NA|309aa|up_2|NZ_CP015249.1_2839645_2840572_-	NA	NA|108aa|up_1|NZ_CP015249.1_2840571_2840895_-	NA	NA|169aa|up_0|NZ_CP015249.1_2841138_2841645_-	COG5529, COG5529, Pyocin large subunit [General function prediction only]	cas2|97aa|down_0|NZ_CP015249.1_2846003_2846294_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|345aa|down_1|NZ_CP015249.1_2846308_2847343_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|210aa|down_2|NZ_CP015249.1_2847345_2847975_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|284aa|down_3|NZ_CP015249.1_2847992_2848844_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|632aa|down_4|NZ_CP015249.1_2848880_2850776_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|241aa|down_5|NZ_CP015249.1_2850772_2851495_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|839aa|down_6|NZ_CP015249.1_2851485_2854002_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas3HD|166aa|down_7|NZ_CP015249.1_2854108_2854606_-	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''	NA|610aa|down_8|NZ_CP015249.1_2855074_2856904_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|515aa|down_9|NZ_CP015249.1_2857804_2859349_+	sd00006, TPR, Tetratricopeptide repeat
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	6	2857087-2857576	5,4,6	PILER-CR,CRT,CRISPRCasFinder	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas3HD	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Type I-U,Type I-C, Type I-U?	CGAGTCGCCGTTTCAATCCACGCGCCCCTGCGGGGCGCGACCG,GTTTCAATCCACGCGCCCCT,GTTTCAATCCACGCGCCCCTGCGGGGCGCGACCG	43,20,34	0	0	NA	NA	I-C:NA:I-C	2,7,5	7	TypeI-U,TypeI-C,TypeI-U?	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA,NA	NA|169aa|up_9|NZ_CP015249.1_2841138_2841645_-	COG5529, COG5529, Pyocin large subunit [General function prediction only]	cas2|97aa|up_8|NZ_CP015249.1_2846003_2846294_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|345aa|up_7|NZ_CP015249.1_2846308_2847343_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|210aa|up_6|NZ_CP015249.1_2847345_2847975_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|284aa|up_5|NZ_CP015249.1_2847992_2848844_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|632aa|up_4|NZ_CP015249.1_2848880_2850776_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|241aa|up_3|NZ_CP015249.1_2850772_2851495_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|839aa|up_2|NZ_CP015249.1_2851485_2854002_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas3HD|166aa|up_1|NZ_CP015249.1_2854108_2854606_-	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''	NA|610aa|up_0|NZ_CP015249.1_2855074_2856904_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|515aa|down_0|NZ_CP015249.1_2857804_2859349_+	sd00006, TPR, Tetratricopeptide repeat	NA|327aa|down_1|NZ_CP015249.1_2859357_2860338_-	cd08419, PBP2_CbbR_RubisCO_like, The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold	NA|496aa|down_2|NZ_CP015249.1_2860482_2861970_+	cd08212, RuBisCO_large_I, Ribulose bisphosphate carboxylase large chain, Form I	NA|139aa|down_3|NZ_CP015249.1_2861994_2862411_+	CHL00130, rbcS, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit; Reviewed	NA|285aa|down_4|NZ_CP015249.1_2862496_2863351_+	CHL00181, cbbX, CbbX; Provisional	NA|362aa|down_5|NZ_CP015249.1_2863409_2864495_+	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|293aa|down_6|NZ_CP015249.1_2864494_2865373_+	PRK15453, PRK15453, phosphoribulokinase; Provisional	NA|681aa|down_7|NZ_CP015249.1_2865369_2867412_+	PRK12753, PRK12753, transketolase; Reviewed	NA|223aa|down_8|NZ_CP015249.1_2867654_2868323_+	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP	NA|357aa|down_9|NZ_CP015249.1_2868353_2869424_+	PRK09196, PRK09196, fructose-bisphosphate aldolase class II
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	7	3321111-3321519	5	CRT	no		cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Orphan	CTTNNNGGCGGCCTTCTTC	19	0	0	NA	NA	NA	6	6	Orphan	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA|231aa|up_6|NZ_CP015249.1_3313688_3314381_-,NA|208aa|up_4|NZ_CP015249.1_3316026_3316650_-,NA|264aa|up_1|NZ_CP015249.1_3319322_3320114_-,NA	NA|400aa|up_9|NZ_CP015249.1_3307262_3308462_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1202aa|up_8|NZ_CP015249.1_3308791_3312397_-	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|293aa|up_7|NZ_CP015249.1_3312409_3313288_-	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component	NA|231aa|up_6|NZ_CP015249.1_3313688_3314381_-	NA	NA|506aa|up_5|NZ_CP015249.1_3314377_3315895_-	pfam13688, Reprolysin_5, Metallo-peptidase family M12	NA|208aa|up_4|NZ_CP015249.1_3316026_3316650_-	NA	NA|141aa|up_3|NZ_CP015249.1_3316863_3317286_-	COG5529, COG5529, Pyocin large subunit [General function prediction only]	NA|402aa|up_2|NZ_CP015249.1_3317698_3318904_-	pfam13191, AAA_16, AAA ATPase domain	NA|264aa|up_1|NZ_CP015249.1_3319322_3320114_-	NA	NA|261aa|up_0|NZ_CP015249.1_3320122_3320905_-	PRK08665, PRK08665, vitamin B12-dependent ribonucleotide reductase	NA|733aa|down_0|NZ_CP015249.1_3321741_3323940_-	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	NA|469aa|down_1|NZ_CP015249.1_3324427_3325834_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|414aa|down_2|NZ_CP015249.1_3325965_3327207_+	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|232aa|down_3|NZ_CP015249.1_3327238_3327934_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|461aa|down_4|NZ_CP015249.1_3327964_3329347_+	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains	NA|384aa|down_5|NZ_CP015249.1_3329389_3330541_-	COG5563, COG5563, Predicted integral membrane proteins containing uncharacterized repeats [Function unknown]	NA|392aa|down_6|NZ_CP015249.1_3330861_3332037_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|798aa|down_7|NZ_CP015249.1_3332125_3334519_-	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|1098aa|down_8|NZ_CP015249.1_3334648_3337942_+	COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|130aa|down_9|NZ_CP015249.1_3338044_3338434_-	COG2259, COG2259, Predicted membrane protein [Function unknown]
GCF_001632775.1_ASM163277v1	NZ_CP015249	Dokdonella koreensis DS-123 chromosome, complete genome	8	3670756-3670849	7	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	Orphan	AAGCGGTCGTCCTGACCGCACTCTTCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas2,cas4,cas7,cas8c,cas5,cas3HD,DinG	NA,NA|274aa|down_6|NZ_CP015249.1_3676529_3677351_+	NA|256aa|up_9|NZ_CP015249.1_3661221_3661989_-	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|299aa|up_8|NZ_CP015249.1_3661985_3662882_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|503aa|up_7|NZ_CP015249.1_3663194_3664703_+	cd00610, OAT_like, Acetyl ornithine aminotransferase family	NA|320aa|up_6|NZ_CP015249.1_3664764_3665724_-	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily	NA|119aa|up_5|NZ_CP015249.1_3665897_3666254_-	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|101aa|up_4|NZ_CP015249.1_3666231_3666534_-	PRK00285, ihfA, integration host factor subunit alpha; Reviewed	NA|792aa|up_3|NZ_CP015249.1_3666535_3668911_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|332aa|up_2|NZ_CP015249.1_3668917_3669913_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|120aa|up_1|NZ_CP015249.1_3670036_3670396_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|66aa|up_0|NZ_CP015249.1_3670409_3670607_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|175aa|down_0|NZ_CP015249.1_3670854_3671379_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|635aa|down_1|NZ_CP015249.1_3671423_3673328_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|198aa|down_2|NZ_CP015249.1_3673735_3674329_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|123aa|down_3|NZ_CP015249.1_3674342_3674711_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|161aa|down_4|NZ_CP015249.1_3674714_3675197_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|307aa|down_5|NZ_CP015249.1_3675358_3676279_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|274aa|down_6|NZ_CP015249.1_3676529_3677351_+	NA	NA|70aa|down_7|NZ_CP015249.1_3677630_3677840_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|84aa|down_8|NZ_CP015249.1_3677914_3678166_+	smart00360, RRM, RNA recognition motif	NA|157aa|down_9|NZ_CP015249.1_3678259_3678730_+	pfam06271, RDD, RDD family
