assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001635955.1_ASM163595v1	NZ_CP011153	Bacillus cereus strain CMCC P0011, complete genome	1	1139178-1139293	1	CRISPRCasFinder	no		cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh	Orphan	GGTTTAAATACGTTAAATAGCAAAACAGGTGA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh,Cas14u_CAS-V,RT	NA|100aa|up_4|NZ_CP011153.1_1133605_1133905_+,NA|282aa|up_3|NZ_CP011153.1_1133959_1134805_-,NA|71aa|down_0|NZ_CP011153.1_1141194_1141407_+,NA|143aa|down_8|NZ_CP011153.1_1146191_1146620_+	NA|349aa|up_9|NZ_CP011153.1_1126018_1127065_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|312aa|up_8|NZ_CP011153.1_1127079_1128015_+	PRK12435, PRK12435, ferrochelatase; Provisional	NA|474aa|up_7|NZ_CP011153.1_1128034_1129456_+	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|451aa|up_6|NZ_CP011153.1_1129512_1130865_-	pfam13218, DUF4026, Protein of unknown function (DUF4026)	NA|789aa|up_5|NZ_CP011153.1_1131106_1133473_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|100aa|up_4|NZ_CP011153.1_1133605_1133905_+	NA	NA|282aa|up_3|NZ_CP011153.1_1133959_1134805_-	NA	NA|134aa|up_2|NZ_CP011153.1_1135034_1135436_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|650aa|up_1|NZ_CP011153.1_1135438_1137388_+	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|191aa|up_0|NZ_CP011153.1_1137659_1138232_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|71aa|down_0|NZ_CP011153.1_1141194_1141407_+	NA	NA|102aa|down_1|NZ_CP011153.1_1141410_1141716_+	COG3860, COG3860, Uncharacterized protein conserved in bacteria [Function unknown]	NA|118aa|down_2|NZ_CP011153.1_1141742_1142096_-	pfam14470, bPH_3, Bacterial PH domain	NA|170aa|down_3|NZ_CP011153.1_1142229_1142739_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|338aa|down_4|NZ_CP011153.1_1142933_1143947_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|43aa|down_5|NZ_CP011153.1_1143986_1144115_-	pfam14149, YhfH, YhfH-like protein	NA|245aa|down_6|NZ_CP011153.1_1144318_1145053_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|330aa|down_7|NZ_CP011153.1_1145062_1146052_+	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|143aa|down_8|NZ_CP011153.1_1146191_1146620_+	NA	NA|511aa|down_9|NZ_CP011153.1_1146781_1148314_+	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated
GCF_001635955.1_ASM163595v1	NZ_CP011153	Bacillus cereus strain CMCC P0011, complete genome	2	2653055-2653146	2	CRISPRCasFinder	no		cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh	Orphan	GTAGGTCCCGTAGGTCCTGGAGGTCCACCAGAAGG	35	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh,Cas14u_CAS-V,RT	NA|65aa|up_9|NZ_CP011153.1_2647662_2647857_+,NA|137aa|up_8|NZ_CP011153.1_2647873_2648284_+,NA|85aa|up_7|NZ_CP011153.1_2648316_2648571_-,NA|120aa|up_5|NZ_CP011153.1_2648929_2649289_+,NA|84aa|up_3|NZ_CP011153.1_2649500_2649752_+,NA|85aa|up_1|NZ_CP011153.1_2650388_2650643_+,NA|107aa|down_0|NZ_CP011153.1_2653558_2653879_+,NA|82aa|down_1|NZ_CP011153.1_2653913_2654159_+,NA|92aa|down_2|NZ_CP011153.1_2654281_2654557_+,NA|109aa|down_3|NZ_CP011153.1_2654679_2655006_+,NA|63aa|down_5|NZ_CP011153.1_2655173_2655362_+,NA|71aa|down_9|NZ_CP011153.1_2658679_2658892_+	NA|65aa|up_9|NZ_CP011153.1_2647662_2647857_+	NA	NA|137aa|up_8|NZ_CP011153.1_2647873_2648284_+	NA	NA|85aa|up_7|NZ_CP011153.1_2648316_2648571_-	NA	NA|93aa|up_6|NZ_CP011153.1_2648658_2648937_+	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|120aa|up_5|NZ_CP011153.1_2648929_2649289_+	NA	NA|56aa|up_4|NZ_CP011153.1_2649307_2649475_+	pfam13128, DUF3954, Protein of unknown function (DUF3954)	NA|84aa|up_3|NZ_CP011153.1_2649500_2649752_+	NA	NA|152aa|up_2|NZ_CP011153.1_2649771_2650227_+	cd11541, NTP-PPase_u4, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|85aa|up_1|NZ_CP011153.1_2650388_2650643_+	NA	NA|200aa|up_0|NZ_CP011153.1_2650753_2651353_-	cd03385, PAP2_BcrC_like, PAP2_like proteins, BcrC_like subfamily	NA|107aa|down_0|NZ_CP011153.1_2653558_2653879_+	NA	NA|82aa|down_1|NZ_CP011153.1_2653913_2654159_+	NA	NA|92aa|down_2|NZ_CP011153.1_2654281_2654557_+	NA	NA|109aa|down_3|NZ_CP011153.1_2654679_2655006_+	NA	NA|33aa|down_4|NZ_CP011153.1_2655054_2655153_+	pfam13137, DUF3983, Protein of unknown function (DUF3983)	NA|63aa|down_5|NZ_CP011153.1_2655173_2655362_+	NA	NA|161aa|down_6|NZ_CP011153.1_2655658_2656141_+	TIGR01637, Putative_autolysin_regulatory_protein_ArpU, phage transcriptional regulator, ArpU family	NA|181aa|down_7|NZ_CP011153.1_2656140_2656683_+	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|317aa|down_8|NZ_CP011153.1_2656897_2657848_+	cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolases	NA|71aa|down_9|NZ_CP011153.1_2658679_2658892_+	NA
GCF_001635955.1_ASM163595v1	NZ_CP011153	Bacillus cereus strain CMCC P0011, complete genome	3	3768007-3770367	1	CRT	no		cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh	Orphan	AGGTNNNACNGGNGCTAC	18	0	0	NA	NA	NA	51	51	Orphan	cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh,Cas14u_CAS-V,RT	NA|71aa|up_8|NZ_CP011153.1_3758298_3758511_-,NA|82aa|down_2|NZ_CP011153.1_3772303_3772549_+,NA|104aa|down_9|NZ_CP011153.1_3779723_3780035_-	NA|253aa|up_9|NZ_CP011153.1_3757343_3758102_-	pfam10552, ORF6C, ORF6C domain	NA|71aa|up_8|NZ_CP011153.1_3758298_3758511_-	NA	NA|220aa|up_7|NZ_CP011153.1_3758713_3759373_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|445aa|up_6|NZ_CP011153.1_3759712_3761047_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|130aa|up_5|NZ_CP011153.1_3761095_3761485_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|424aa|up_4|NZ_CP011153.1_3761659_3762931_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|425aa|up_3|NZ_CP011153.1_3762923_3764198_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|208aa|up_2|NZ_CP011153.1_3764290_3764914_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|319aa|up_1|NZ_CP011153.1_3765182_3766139_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|322aa|up_0|NZ_CP011153.1_3766403_3767369_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|75aa|down_0|NZ_CP011153.1_3770923_3771148_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|318aa|down_1|NZ_CP011153.1_3771169_3772123_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|82aa|down_2|NZ_CP011153.1_3772303_3772549_+	NA	NA|311aa|down_3|NZ_CP011153.1_3772611_3773544_-	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|619aa|down_4|NZ_CP011153.1_3773893_3775750_-	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|304aa|down_5|NZ_CP011153.1_3775763_3776675_-	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|251aa|down_6|NZ_CP011153.1_3776671_3777424_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|388aa|down_7|NZ_CP011153.1_3777583_3778747_-	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	NA|181aa|down_8|NZ_CP011153.1_3778862_3779405_-	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|104aa|down_9|NZ_CP011153.1_3779723_3780035_-	NA
GCF_001635955.1_ASM163595v1	NZ_CP011153	Bacillus cereus strain CMCC P0011, complete genome	4	5288134-5288267	3	CRISPRCasFinder	no		cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh	Orphan	GTTGATTTCTCTTCTTTTTGAGA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh,Cas14u_CAS-V,RT	NA|45aa|up_0|NZ_CP011153.1_5287811_5287946_-,NA	NA|605aa|up_9|NZ_CP011153.1_5278606_5280421_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|294aa|up_8|NZ_CP011153.1_5280481_5281363_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|256aa|up_7|NZ_CP011153.1_5281607_5282375_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|234aa|up_6|NZ_CP011153.1_5282487_5283189_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|248aa|up_5|NZ_CP011153.1_5283178_5283922_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|226aa|up_4|NZ_CP011153.1_5284182_5284860_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|145aa|up_3|NZ_CP011153.1_5285204_5285639_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|334aa|up_2|NZ_CP011153.1_5286068_5287070_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|91aa|up_1|NZ_CP011153.1_5287230_5287503_-	pfam12116, SpoIIID, Stage III sporulation protein D	NA|45aa|up_0|NZ_CP011153.1_5287811_5287946_-	NA	NA|235aa|down_0|NZ_CP011153.1_5289154_5289859_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|281aa|down_1|NZ_CP011153.1_5289858_5290701_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|336aa|down_2|NZ_CP011153.1_5290881_5291889_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|340aa|down_3|NZ_CP011153.1_5291988_5293008_-	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D	NA|435aa|down_4|NZ_CP011153.1_5293215_5294520_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|237aa|down_5|NZ_CP011153.1_5294559_5295270_-	pfam08680, DUF1779, TATA-box binding	NA|79aa|down_6|NZ_CP011153.1_5295315_5295552_-	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|507aa|down_7|NZ_CP011153.1_5295754_5297275_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|501aa|down_8|NZ_CP011153.1_5297276_5298779_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|621aa|down_9|NZ_CP011153.1_5298775_5300638_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed
GCF_001635955.1_ASM163595v1	NZ_CP011153	Bacillus cereus strain CMCC P0011, complete genome	5	5305265-5305368	4	CRISPRCasFinder	no		cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh	Orphan	CCTTCTCTTTTCTGCTTCGCTAACGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,c2c9_V-U4,cas14j,c2c10_CAS-V-U3,DinG,cas14k,DEDDh,Cas14u_CAS-V,RT	NA,NA	NA|237aa|up_9|NZ_CP011153.1_5294559_5295270_-	pfam08680, DUF1779, TATA-box binding	NA|79aa|up_8|NZ_CP011153.1_5295315_5295552_-	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|507aa|up_7|NZ_CP011153.1_5295754_5297275_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|501aa|up_6|NZ_CP011153.1_5297276_5298779_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|621aa|up_5|NZ_CP011153.1_5298775_5300638_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed	NA|105aa|up_4|NZ_CP011153.1_5300668_5300983_-	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK	NA|175aa|up_3|NZ_CP011153.1_5300975_5301500_-	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J	NA|140aa|up_2|NZ_CP011153.1_5301496_5301916_-	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI	NA|334aa|up_1|NZ_CP011153.1_5301941_5302943_-	PRK06076, PRK06076, NADH-quinone oxidoreductase subunit NuoH	NA|367aa|up_0|NZ_CP011153.1_5302942_5304043_-	PRK12322, PRK12322, NADH-quinone oxidoreductase subunit D	NA|173aa|down_0|NZ_CP011153.1_5305583_5306102_-	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB	NA|123aa|down_1|NZ_CP011153.1_5306092_5306461_-	PRK07756, PRK07756, NADH-quinone oxidoreductase subunit A	NA|910aa|down_2|NZ_CP011153.1_5306715_5309445_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|215aa|down_3|NZ_CP011153.1_5309468_5310113_-	pfam06161, DUF975, Protein of unknown function (DUF975)	NA|262aa|down_4|NZ_CP011153.1_5310162_5310948_-	pfam06161, DUF975, Protein of unknown function (DUF975)	NA|134aa|down_5|NZ_CP011153.1_5311085_5311487_-	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|469aa|down_6|NZ_CP011153.1_5311507_5312914_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|287aa|down_7|NZ_CP011153.1_5313153_5314014_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|503aa|down_8|NZ_CP011153.1_5314280_5315789_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|181aa|down_9|NZ_CP011153.1_5315800_5316343_-	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated
