assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	1	190856-190940	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGGTG	26	1	2	190882-190914|190882-190914	NZ_CP013955.1_1444997-1445029|NZ_CP013955.1_1533375-1533343	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|402aa|up_9|NZ_CP013955.1_180001_181207_+,NA|68aa|down_0|NZ_CP013955.1_191001_191205_-	NA|402aa|up_9|NZ_CP013955.1_180001_181207_+	NA	NA|402aa|up_8|NZ_CP013955.1_181207_182413_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|186aa|up_7|NZ_CP013955.1_182423_182981_+	COG2148, WcaJ, Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane]	NA|296aa|up_6|NZ_CP013955.1_182980_183868_+	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs	NA|421aa|up_5|NZ_CP013955.1_183921_185184_+	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|382aa|up_4|NZ_CP013955.1_185260_186406_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|109aa|up_3|NZ_CP013955.1_186470_186797_-	PRK13313, PRK13313, staphylobilin-forming heme oxygenase IsdI	NA|128aa|up_2|NZ_CP013955.1_186803_187187_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|496aa|up_1|NZ_CP013955.1_187613_189101_+	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like	NA|320aa|up_0|NZ_CP013955.1_189747_190707_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|68aa|down_0|NZ_CP013955.1_191001_191205_-	NA	NA|171aa|down_1|NZ_CP013955.1_191383_191896_+	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|247aa|down_2|NZ_CP013955.1_192237_192978_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|324aa|down_3|NZ_CP013955.1_192991_193963_+	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily	NA|254aa|down_4|NZ_CP013955.1_193959_194721_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|344aa|down_5|NZ_CP013955.1_194733_195765_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|120aa|down_6|NZ_CP013955.1_195981_196341_+	COG5609, COG5609, Uncharacterized conserved protein [Function unknown]	NA|342aa|down_7|NZ_CP013955.1_196514_197540_+	PRK07574, PRK07574, NAD-dependent formate dehydrogenase	NA|417aa|down_8|NZ_CP013955.1_197925_199176_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|2392aa|down_9|NZ_CP013955.1_199622_206798_+	PRK12467, PRK12467, peptide synthase; Provisional
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	2	431972-432073	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|128aa|up_8|NZ_CP013955.1_421713_422097_-,NA|33aa|up_1|NZ_CP013955.1_429676_429775_+,NA|221aa|down_1|NZ_CP013955.1_433163_433826_-	NA|194aa|up_9|NZ_CP013955.1_421066_421648_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_8|NZ_CP013955.1_421713_422097_-	NA	NA|209aa|up_7|NZ_CP013955.1_422366_422993_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|508aa|up_6|NZ_CP013955.1_423436_424960_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_5|NZ_CP013955.1_424975_425545_-	TIGR03137, AhpC, peroxiredoxin	NA|391aa|up_4|NZ_CP013955.1_425888_427061_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|252aa|up_3|NZ_CP013955.1_427368_428124_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_2|NZ_CP013955.1_428203_429592_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|33aa|up_1|NZ_CP013955.1_429676_429775_+	NA	NA|440aa|up_0|NZ_CP013955.1_430438_431758_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|319aa|down_0|NZ_CP013955.1_432089_433046_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|NZ_CP013955.1_433163_433826_-	NA	NA|136aa|down_2|NZ_CP013955.1_433968_434376_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP013955.1_434888_435467_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP013955.1_435466_436735_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP013955.1_436772_438239_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP013955.1_438263_439805_+	PRK00074, guaA, GMP synthase; Reviewed	NA|398aa|down_7|NZ_CP013955.1_439872_441066_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|67aa|down_8|NZ_CP013955.1_441092_441293_-	pfam11372, DUF3173, Domain of unknown function (DUF3173)	NA|77aa|down_9|NZ_CP013955.1_441790_442021_-	pfam12645, HTH_16, Helix-turn-helix domain
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	3	640571-641061	1	CRT	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	AGCGANTCAGANTCAGANAGCGA	23	6	44	640594-640624|640594-640624|640594-640624|640594-640624|640594-640624|640648-640690|640780-640810|640780-640810|640780-640810|640780-640810|640780-640810|640780-640810|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640906-640936|640960-640990|640960-640990|640960-640990|640960-640990|640960-640990|640960-640990|640960-640990|641014-641038|641014-641038|641014-641038|641014-641038|641014-641038|641014-641038|641014-641038|641014-641038	NZ_CP013955.1_645094-645124|NZ_CP013955.1_649099-649129|NZ_CP013955.1_645460-645490|NZ_CP013955.1_648919-648949|NZ_CP013955.1_649225-649255|NZ_CP013955.1_648997-649039|NZ_CP013955.1_649153-649183|NZ_CP013955.1_905992-906022|NZ_CP013955.1_645112-645142|NZ_CP013955.1_645238-645268|NZ_CP013955.1_906118-906148|NZ_CP013955.1_906154-906184|NZ_CP013955.1_645388-645418|NZ_CP013955.1_649063-649093|NZ_CP013955.1_649153-649183|NZ_CP013955.1_2815383-2815353|NZ_CP013955.1_640558-640588|NZ_CP013955.1_645112-645142|NZ_CP013955.1_645202-645232|NZ_CP013955.1_645238-645268|NZ_CP013955.1_645424-645454|NZ_CP013955.1_645460-645490|NZ_CP013955.1_648919-648949|NZ_CP013955.1_649027-649057|NZ_CP013955.1_649225-649255|NZ_CP013955.1_905992-906022|NZ_CP013955.1_906118-906148|NZ_CP013955.1_906154-906184|NZ_CP013955.1_906190-906220|NZ_CP013955.1_645346-645376|NZ_CP013955.1_648973-649003|NZ_CP013955.1_649117-649147|NZ_CP013955.1_649243-649273|NZ_CP013955.1_645370-645400|NZ_CP013955.1_2815095-2815065|NZ_CP013955.1_2815131-2815101|NZ_CP013955.1_649159-649183|NZ_CP013955.1_905998-906022|NZ_CP013955.1_645010-645034|NZ_CP013955.1_645118-645142|NZ_CP013955.1_645244-645268|NZ_CP013955.1_906124-906148|NZ_CP013955.1_906160-906184|NZ_CP013955.1_2815107-2815083	NA	8	8	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA	NA|293aa|up_9|NZ_CP013955.1_628238_629117_+	PRK04155, PRK04155, protein deglycase HchA	NA|546aa|up_8|NZ_CP013955.1_629275_630913_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|322aa|up_7|NZ_CP013955.1_631126_632092_+	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs	NA|359aa|up_6|NZ_CP013955.1_632427_633504_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|228aa|up_5|NZ_CP013955.1_633753_634437_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|221aa|up_4|NZ_CP013955.1_634552_635215_-	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|206aa|up_3|NZ_CP013955.1_635207_635825_-	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|157aa|up_2|NZ_CP013955.1_635891_636362_+	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|290aa|up_1|NZ_CP013955.1_636508_637378_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|189aa|up_0|NZ_CP013955.1_637399_637966_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|1356aa|down_0|NZ_CP013955.1_641605_645673_+	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|1142aa|down_1|NZ_CP013955.1_646066_649492_+	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|491aa|down_2|NZ_CP013955.1_649611_651084_+	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|497aa|down_3|NZ_CP013955.1_651208_652699_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|293aa|down_4|NZ_CP013955.1_652980_653859_-	PRK13674, PRK13674, GTP cyclohydrolase I FolE2	NA|222aa|down_5|NZ_CP013955.1_653871_654537_-	TIGR04000, thiol_BshB2, bacillithiol biosynthesis deacetylase BshB2	NA|121aa|down_6|NZ_CP013955.1_654550_654913_-	pfam08830, DUF1806, Protein of unknown function (DUF1806)	NA|253aa|down_7|NZ_CP013955.1_655188_655947_+	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|211aa|down_8|NZ_CP013955.1_656023_656656_+	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase	NA|183aa|down_9|NZ_CP013955.1_656657_657206_+	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	4	816815-816897	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA|34aa|down_1|NZ_CP013955.1_818552_818654_+,NA|52aa|down_8|NZ_CP013955.1_826500_826656_+	NA|237aa|up_9|NZ_CP013955.1_802202_802913_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_8|NZ_CP013955.1_802896_803901_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_7|NZ_CP013955.1_804374_806315_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|440aa|up_6|NZ_CP013955.1_806533_807853_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|628aa|up_5|NZ_CP013955.1_808104_809988_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP013955.1_809999_811781_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP013955.1_812002_812980_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP013955.1_812972_814487_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP013955.1_814726_815785_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP013955.1_816123_816666_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP013955.1_817544_818462_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP013955.1_818552_818654_+	NA	NA|502aa|down_2|NZ_CP013955.1_818731_820237_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_3|NZ_CP013955.1_820577_821078_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_4|NZ_CP013955.1_821097_821964_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|down_5|NZ_CP013955.1_822764_823163_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_6|NZ_CP013955.1_823125_825231_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_7|NZ_CP013955.1_825348_826320_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|52aa|down_8|NZ_CP013955.1_826500_826656_+	NA	NA|324aa|down_9|NZ_CP013955.1_826694_827666_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	5	857761-857839	4	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TGTAGAATTTCTTTTCGAAATTCT	24	1	3	857785-857815|857785-857815|857785-857815	NZ_CP013955.1_314081-314051|NZ_CP013955.1_314026-313996|NZ_CP013955.1_1797585-1797615	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA|35aa|up_7|NZ_CP013955.1_848637_848742_+,NA|36aa|up_5|NZ_CP013955.1_850174_850282_+,NA|48aa|down_5|NZ_CP013955.1_863163_863307_-	NA|191aa|up_9|NZ_CP013955.1_845078_845651_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_CP013955.1_846064_848596_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NZ_CP013955.1_848637_848742_+	NA	NA|370aa|up_6|NZ_CP013955.1_848910_850021_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_CP013955.1_850174_850282_+	NA	NA|280aa|up_4|NZ_CP013955.1_850429_851269_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_CP013955.1_851442_852093_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_CP013955.1_852089_852326_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_CP013955.1_852594_854580_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_CP013955.1_854587_857434_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_CP013955.1_858097_859030_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_CP013955.1_859035_859875_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_CP013955.1_859882_860368_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_CP013955.1_860375_861815_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_CP013955.1_861881_862817_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|48aa|down_5|NZ_CP013955.1_863163_863307_-	NA	NA|304aa|down_6|NZ_CP013955.1_863585_864497_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_7|NZ_CP013955.1_864493_865489_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_8|NZ_CP013955.1_865599_866544_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_9|NZ_CP013955.1_867107_867695_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	6	863219-863309	5	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TCTGTGTTGGGGCCCACACCCCAACTCGCATTG	33	1	14	863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276|863252-863276	NZ_CP013955.1_190864-190840|NZ_CP013955.1_313997-313973|NZ_CP013955.1_314107-314083|NZ_CP013955.1_684789-684765|NZ_CP013955.1_815856-815880|NZ_CP013955.1_922468-922492|NZ_CP013955.1_1444921-1444897|NZ_CP013955.1_1760509-1760533|NZ_CP013955.1_1776402-1776378|NZ_CP013955.1_2099404-2099428|NZ_CP013955.1_314052-314028|NZ_CP013955.1_992509-992533|NZ_CP013955.1_1797440-1797464|NZ_CP013955.1_1797673-1797697	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA	NA|280aa|up_9|NZ_CP013955.1_850429_851269_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_8|NZ_CP013955.1_851442_852093_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_7|NZ_CP013955.1_852089_852326_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_6|NZ_CP013955.1_852594_854580_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_5|NZ_CP013955.1_854587_857434_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|up_4|NZ_CP013955.1_858097_859030_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|up_3|NZ_CP013955.1_859035_859875_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|up_2|NZ_CP013955.1_859882_860368_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_1|NZ_CP013955.1_860375_861815_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|up_0|NZ_CP013955.1_861881_862817_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_0|NZ_CP013955.1_863585_864497_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_1|NZ_CP013955.1_864493_865489_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_2|NZ_CP013955.1_865599_866544_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_3|NZ_CP013955.1_867107_867695_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_4|NZ_CP013955.1_867937_868840_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_5|NZ_CP013955.1_869542_870172_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_6|NZ_CP013955.1_870928_871942_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_7|NZ_CP013955.1_871994_873005_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_8|NZ_CP013955.1_873143_874334_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_9|NZ_CP013955.1_874455_875217_+	PRK00042, tpiA, triosephosphate isomerase; Provisional
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	7	870413-870492	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CAGCTTCTGTGTTGGGGCCCCGCC	24	1	6	870437-870468|870437-870468|870437-870468|870437-870468|870437-870468|870437-870468	NZ_CP013955.1_91043-91074|NZ_CP013955.1_922725-922756|NZ_CP013955.1_1776471-1776440|NZ_CP013955.1_2201420-2201389|NZ_CP013955.1_2595292-2595323|NZ_CP013955.1_1445105-1445074	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|48aa|up_6|NZ_CP013955.1_863163_863307_-,NA|153aa|down_6|NZ_CP013955.1_878509_878968_+	NA|162aa|up_9|NZ_CP013955.1_859882_860368_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_8|NZ_CP013955.1_860375_861815_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|up_7|NZ_CP013955.1_861881_862817_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|48aa|up_6|NZ_CP013955.1_863163_863307_-	NA	NA|304aa|up_5|NZ_CP013955.1_863585_864497_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|up_4|NZ_CP013955.1_864493_865489_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|up_3|NZ_CP013955.1_865599_866544_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|up_2|NZ_CP013955.1_867107_867695_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|up_1|NZ_CP013955.1_867937_868840_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|up_0|NZ_CP013955.1_869542_870172_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_0|NZ_CP013955.1_870928_871942_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_1|NZ_CP013955.1_871994_873005_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_2|NZ_CP013955.1_873143_874334_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_3|NZ_CP013955.1_874455_875217_+	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|506aa|down_4|NZ_CP013955.1_875219_876737_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|435aa|down_5|NZ_CP013955.1_876866_878171_+	PRK00077, eno, enolase; Provisional	NA|153aa|down_6|NZ_CP013955.1_878509_878968_+	NA	NA|78aa|down_7|NZ_CP013955.1_879034_879268_+	COG1314, SecG, Preprotein translocase subunit SecG [Intracellular trafficking and secretion]	NA|247aa|down_8|NZ_CP013955.1_879383_880124_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|791aa|down_9|NZ_CP013955.1_880157_882530_+	TIGR02063, Ribonuclease_R, ribonuclease R
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	8	922395-922476	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	1	922419-922452	NZ_CP013955.1_1445029-1444996	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA	NA|194aa|up_9|NZ_CP013955.1_915497_916079_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|206aa|up_8|NZ_CP013955.1_916151_916769_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_7|NZ_CP013955.1_916923_917418_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_6|NZ_CP013955.1_917816_918239_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_5|NZ_CP013955.1_918386_919103_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_4|NZ_CP013955.1_919185_919725_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_3|NZ_CP013955.1_919875_920196_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_2|NZ_CP013955.1_920339_920696_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_1|NZ_CP013955.1_920853_921234_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_0|NZ_CP013955.1_921412_922291_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP013955.1_923087_923474_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP013955.1_923466_923763_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP013955.1_924012_925038_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP013955.1_925030_925726_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP013955.1_925743_926565_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_5|NZ_CP013955.1_926918_927113_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_6|NZ_CP013955.1_927346_928198_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_7|NZ_CP013955.1_928525_929287_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_8|NZ_CP013955.1_929384_930692_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_9|NZ_CP013955.1_930797_932048_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	9	2159001-2159082	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	GGCCCCCACCCCAACTTACATTGT	24	1	5	2159025-2159058|2159025-2159058|2159025-2159058|2159025-2159058|2159025-2159058	NZ_CP013955.1_857760-857793|NZ_CP013955.1_1232650-1232617|NZ_CP013955.1_1889847-1889814|NZ_CP013955.1_1449370-1449403|NZ_CP013955.1_2870230-2870263	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|59aa|up_8|NZ_CP013955.1_2149392_2149569_-,NA|33aa|up_7|NZ_CP013955.1_2149811_2149910_-,NA|114aa|down_8|NZ_CP013955.1_2169554_2169896_-	NA|127aa|up_9|NZ_CP013955.1_2148754_2149135_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|59aa|up_8|NZ_CP013955.1_2149392_2149569_-	NA	NA|33aa|up_7|NZ_CP013955.1_2149811_2149910_-	NA	NA|429aa|up_6|NZ_CP013955.1_2150109_2151396_+	PRK08637, PRK08637, hypothetical protein; Provisional	NA|97aa|up_5|NZ_CP013955.1_2151674_2151965_-	pfam03642, MAP, MAP domain	NA|477aa|up_4|NZ_CP013955.1_2151979_2153410_-	pfam03642, MAP, MAP domain	NA|345aa|up_3|NZ_CP013955.1_2153755_2154790_+	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase	NA|339aa|up_2|NZ_CP013955.1_2155027_2156044_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|352aa|up_1|NZ_CP013955.1_2156065_2157121_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|408aa|up_0|NZ_CP013955.1_2157556_2158780_+	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|436aa|down_0|NZ_CP013955.1_2159223_2160531_+	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|391aa|down_1|NZ_CP013955.1_2160651_2161824_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|241aa|down_2|NZ_CP013955.1_2162879_2163602_+	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|267aa|down_3|NZ_CP013955.1_2163770_2164571_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|391aa|down_4|NZ_CP013955.1_2164896_2166069_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|187aa|down_5|NZ_CP013955.1_2166690_2167251_+	cd15783, SA1633_like, Uncharacterized protein family conserved in Staphylococci	NA|235aa|down_6|NZ_CP013955.1_2168129_2168834_+	PRK13038, PRK13038, superantigen-like protein; Reviewed	NA|190aa|down_7|NZ_CP013955.1_2168988_2169558_-	COG3728, XtmA, Phage terminase, small subunit [DNA replication, recombination, and repair]	NA|114aa|down_8|NZ_CP013955.1_2169554_2169896_-	NA	NA|176aa|down_9|NZ_CP013955.1_2169898_2170426_-	COG5577, COG5577, Spore coat protein [Cell envelope biogenesis, outer membrane]
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	10	2177311-2177399	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	GTTTTTGACTGACTTCTCAATCA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|114aa|up_9|NZ_CP013955.1_2171302_2171644_-,NA|127aa|up_7|NZ_CP013955.1_2172731_2173112_-,NA|50aa|up_3|NZ_CP013955.1_2176407_2176557_-,NA|49aa|up_2|NZ_CP013955.1_2176609_2176756_-,NA	NA|114aa|up_9|NZ_CP013955.1_2171302_2171644_-	NA	NA|214aa|up_8|NZ_CP013955.1_2172093_2172735_-	pfam16560, SAPI, Putative mobile pathogenicity island	NA|127aa|up_7|NZ_CP013955.1_2172731_2173112_-	NA	NA|570aa|up_6|NZ_CP013955.1_2173421_2175131_-	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|290aa|up_5|NZ_CP013955.1_2175144_2176014_-	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1)	NA|109aa|up_4|NZ_CP013955.1_2176078_2176405_-	pfam07342, DUF1474, Protein of unknown function (DUF1474)	NA|50aa|up_3|NZ_CP013955.1_2176407_2176557_-	NA	NA|49aa|up_2|NZ_CP013955.1_2176609_2176756_-	NA	NA|106aa|up_1|NZ_CP013955.1_2176752_2177070_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|73aa|up_0|NZ_CP013955.1_2177074_2177293_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|225aa|down_0|NZ_CP013955.1_2177465_2178140_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|391aa|down_1|NZ_CP013955.1_2178153_2179326_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|539aa|down_2|NZ_CP013955.1_2179394_2181011_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_3|NZ_CP013955.1_2181086_2181371_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|248aa|down_4|NZ_CP013955.1_2181545_2182289_+	pfam02517, Abi, CAAX protease self-immunity	NA|416aa|down_5|NZ_CP013955.1_2182313_2183561_-	PRK10819, PRK10819, transport protein TonB; Provisional	NA|209aa|down_6|NZ_CP013955.1_2183757_2184384_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|262aa|down_7|NZ_CP013955.1_2184744_2185530_+	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|45aa|down_8|NZ_CP013955.1_2186129_2186264_-	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|188aa|down_9|NZ_CP013955.1_2186499_2187063_+	COG4512, AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription]
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	11	2306487-2306567	10	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,RT,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|77aa|up_5|NZ_CP013955.1_2301361_2301592_-,NA|364aa|up_0|NZ_CP013955.1_2305378_2306470_+,NA|35aa|down_0|NZ_CP013955.1_2306902_2307007_-,NA|53aa|down_1|NZ_CP013955.1_2307686_2307845_+	NA|237aa|up_9|NZ_CP013955.1_2296972_2297683_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP013955.1_2297803_2298247_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP013955.1_2298446_2298860_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP013955.1_2299316_2300690_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP013955.1_2301361_2301592_-	NA	NA|313aa|up_4|NZ_CP013955.1_2301622_2302561_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP013955.1_2302996_2303662_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP013955.1_2303813_2304134_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|326aa|up_1|NZ_CP013955.1_2304135_2305113_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP013955.1_2305378_2306470_+	NA	NA|35aa|down_0|NZ_CP013955.1_2306902_2307007_-	NA	NA|53aa|down_1|NZ_CP013955.1_2307686_2307845_+	NA	NA|286aa|down_2|NZ_CP013955.1_2308502_2309360_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|NZ_CP013955.1_2309427_2310210_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|NZ_CP013955.1_2310441_2312247_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NZ_CP013955.1_2312927_2314466_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NZ_CP013955.1_2314500_2316633_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NZ_CP013955.1_2316644_2317079_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NZ_CP013955.1_2317078_2318185_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2482aa|down_9|NZ_CP013955.1_2318503_2325949_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	12	2318808-2318893	11	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,RT,WYL	Type I-A	CCAACTGATTTTTGCGTATCATTAGT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|364aa|up_9|NZ_CP013955.1_2305378_2306470_+,NA|35aa|up_8|NZ_CP013955.1_2306902_2307007_-,NA|53aa|up_7|NZ_CP013955.1_2307686_2307845_+,NA	NA|364aa|up_9|NZ_CP013955.1_2305378_2306470_+	NA	NA|35aa|up_8|NZ_CP013955.1_2306902_2307007_-	NA	NA|53aa|up_7|NZ_CP013955.1_2307686_2307845_+	NA	NA|286aa|up_6|NZ_CP013955.1_2308502_2309360_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|up_5|NZ_CP013955.1_2309427_2310210_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|up_4|NZ_CP013955.1_2310441_2312247_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|up_3|NZ_CP013955.1_2312927_2314466_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|up_2|NZ_CP013955.1_2314500_2316633_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|up_1|NZ_CP013955.1_2316644_2317079_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|up_0|NZ_CP013955.1_2317078_2318185_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_0|NZ_CP013955.1_2326226_2327582_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_1|NZ_CP013955.1_2327608_2328541_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|270aa|down_2|NZ_CP013955.1_2328542_2329352_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_3|NZ_CP013955.1_2329540_2330449_-	cd09989, Arginase, Arginase family	NA|355aa|down_4|NZ_CP013955.1_2336689_2337754_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|481aa|down_5|NZ_CP013955.1_2337901_2339344_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|158aa|down_6|NZ_CP013955.1_2339666_2340140_-	pfam17080, SepA, Multidrug Resistance efflux pump	NA|448aa|down_7|NZ_CP013955.1_2340238_2341582_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|228aa|down_8|NZ_CP013955.1_2341758_2342442_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|396aa|down_9|NZ_CP013955.1_2342460_2343648_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc
GCF_001640925.1_ASM164092v1	NZ_CP013955	Staphylococcus aureus strain NCCP14562 isolate Sequencing chromosome, complete genome	13	2429450-2429530	12	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTG	25	1	13	2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505|2429475-2429505	NZ_CP013955.1_870387-870417|NZ_CP013955.1_91049-91079|NZ_CP013955.1_390413-390383|NZ_CP013955.1_684853-684823|NZ_CP013955.1_922731-922761|NZ_CP013955.1_1091171-1091201|NZ_CP013955.1_1238248-1238218|NZ_CP013955.1_1444985-1444955|NZ_CP013955.1_1533387-1533417|NZ_CP013955.1_1776465-1776435|NZ_CP013955.1_2096536-2096566|NZ_CP013955.1_2418674-2418704|NZ_CP013955.1_2595298-2595328	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|55aa|up_9|NZ_CP013955.1_2419983_2420148_+,NA|106aa|up_8|NZ_CP013955.1_2420392_2420710_+,NA|84aa|up_5|NZ_CP013955.1_2425831_2426083_+,NA|62aa|up_0|NZ_CP013955.1_2429222_2429408_+,NA	NA|55aa|up_9|NZ_CP013955.1_2419983_2420148_+	NA	NA|106aa|up_8|NZ_CP013955.1_2420392_2420710_+	NA	NA|1056aa|up_7|NZ_CP013955.1_2420893_2424061_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_CP013955.1_2424177_2425443_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP013955.1_2425831_2426083_+	NA	NA|255aa|up_4|NZ_CP013955.1_2426074_2426839_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP013955.1_2427000_2427441_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP013955.1_2427433_2428645_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP013955.1_2428746_2429097_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|62aa|up_0|NZ_CP013955.1_2429222_2429408_+	NA	NA|341aa|down_0|NZ_CP013955.1_2429673_2430696_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP013955.1_2430715_2431315_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP013955.1_2431321_2431555_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP013955.1_2431560_2432007_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP013955.1_2432020_2432506_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP013955.1_2432502_2433762_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP013955.1_2433824_2434319_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP013955.1_2434320_2434827_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP013955.1_2434857_2435862_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP013955.1_2436031_2436637_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
