assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	1	562952-563070	1	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	GGTGTTGGGAAGTAACCAGTTTGTTACAAGCAATGCT	37	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA|150aa|up_3|NZ_CP011388.1_557268_557718_+,NA	NA|504aa|up_9|NZ_CP011388.1_547419_548931_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|473aa|up_8|NZ_CP011388.1_550157_551576_+	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism]	NA|302aa|up_7|NZ_CP011388.1_551908_552814_-	cd09989, Arginase, Arginase family	NA|440aa|up_6|NZ_CP011388.1_552938_554258_-	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|484aa|up_5|NZ_CP011388.1_554464_555916_-	COG0281, SfcA, Malic enzyme [Energy production and conversion]	NA|351aa|up_4|NZ_CP011388.1_556034_557087_-	pfam11258, DUF3048, Protein of unknown function (DUF3048) N-terminal domain	NA|150aa|up_3|NZ_CP011388.1_557268_557718_+	NA	NA|200aa|up_2|NZ_CP011388.1_558424_559024_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|420aa|up_1|NZ_CP011388.1_559690_560950_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|526aa|up_0|NZ_CP011388.1_561009_562587_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|215aa|down_0|NZ_CP011388.1_563220_563865_-	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|348aa|down_1|NZ_CP011388.1_563861_564905_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|523aa|down_2|NZ_CP011388.1_564943_566512_-	COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]	NA|749aa|down_3|NZ_CP011388.1_566547_568794_-	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|230aa|down_4|NZ_CP011388.1_568771_569461_-	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|83aa|down_5|NZ_CP011388.1_569488_569737_-	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase	NA|296aa|down_6|NZ_CP011388.1_570126_571014_-	cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase	NA|432aa|down_7|NZ_CP011388.1_571066_572362_-	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1	NA|443aa|down_8|NZ_CP011388.1_572366_573695_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|167aa|down_9|NZ_CP011388.1_573691_574192_-	pfam00731, AIRC, AIR carboxylase
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	2	680028-680213	2	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	CATTTGTAGCGATAACGCTACTA	23	0	0	NA	NA	NA	3	3	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA|225aa|up_8|NZ_CP011388.1_666848_667523_-,NA|56aa|up_6|NZ_CP011388.1_670732_670900_+,NA|192aa|up_3|NZ_CP011388.1_673429_674005_+,NA	NA|204aa|up_9|NZ_CP011388.1_666217_666829_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|225aa|up_8|NZ_CP011388.1_666848_667523_-	NA	NA|105aa|up_7|NZ_CP011388.1_670311_670626_-	cd10152, SaCsoR-like_DUF156, Staphylococcus aureus copper-sensitive operon repressor (CsoR), and related domains; this family was previously known as part of DUF156	NA|56aa|up_6|NZ_CP011388.1_670732_670900_+	NA	NA|458aa|up_5|NZ_CP011388.1_671071_672445_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|274aa|up_4|NZ_CP011388.1_672565_673387_+	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms]	NA|192aa|up_3|NZ_CP011388.1_673429_674005_+	NA	NA|210aa|up_2|NZ_CP011388.1_674968_675598_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|983aa|up_1|NZ_CP011388.1_675768_678717_+	TIGR03607, TIGR03607, patatin-related protein	NA|338aa|up_0|NZ_CP011388.1_678796_679810_+	PRK13523, PRK13523, NADPH dehydrogenase NamA; Provisional	NA|313aa|down_0|NZ_CP011388.1_680411_681350_+	pfam14099, Polysacc_lyase, Polysaccharide lyase	NA|287aa|down_1|NZ_CP011388.1_681436_682297_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|549aa|down_2|NZ_CP011388.1_682309_683956_-	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|577aa|down_3|NZ_CP011388.1_683948_685679_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|573aa|down_4|NZ_CP011388.1_685809_687528_-	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold	NA|306aa|down_5|NZ_CP011388.1_687812_688730_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|293aa|down_6|NZ_CP011388.1_688767_689646_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|349aa|down_7|NZ_CP011388.1_689865_690912_-	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]	NA|357aa|down_8|NZ_CP011388.1_690908_691979_-	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]	NA|861aa|down_9|NZ_CP011388.1_692171_694754_-	cd04082, CBM35_pectate_lyase-like, Carbohydrate Binding Module family 35 (CBM35), pectate lyase-like; appended mainly to enzymes that bind mannan (Man), xylan, glucuronic acid (GlcA) and possibly glucans
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	3	1760231-1760341	3	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	GCTTCGCGCTCGCGCGCCAGCTCGCTC	27	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA,NA|77aa|down_2|NZ_CP011388.1_1765875_1766106_+	NA|1495aa|up_9|NZ_CP011388.1_1738130_1742615_-	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10	NA|369aa|up_8|NZ_CP011388.1_1742834_1743941_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|378aa|up_7|NZ_CP011388.1_1743970_1745104_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|577aa|up_6|NZ_CP011388.1_1745202_1746933_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|736aa|up_5|NZ_CP011388.1_1746988_1749196_-	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|1811aa|up_4|NZ_CP011388.1_1749612_1755045_+	cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins	NA|318aa|up_3|NZ_CP011388.1_1755412_1756366_-	PRK08939, PRK08939, primosomal protein DnaI; Reviewed	NA|491aa|up_2|NZ_CP011388.1_1756404_1757877_-	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair]	NA|225aa|up_1|NZ_CP011388.1_1758018_1758693_+	cd05233, SDR_c, classical (c) SDRs	NA|180aa|up_0|NZ_CP011388.1_1758738_1759278_-	pfam02674, Colicin_V, Colicin V production protein	NA|814aa|down_0|NZ_CP011388.1_1761906_1764348_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|345aa|down_1|NZ_CP011388.1_1764378_1765413_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|77aa|down_2|NZ_CP011388.1_1765875_1766106_+	NA	NA|72aa|down_3|NZ_CP011388.1_1766155_1766371_-	PRK10428, PRK10428, hypothetical protein; Provisional	NA|494aa|down_4|NZ_CP011388.1_1766436_1767918_-	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase	NA|415aa|down_5|NZ_CP011388.1_1768046_1769291_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|288aa|down_6|NZ_CP011388.1_1769432_1770296_+	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|492aa|down_7|NZ_CP011388.1_1770362_1771838_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|846aa|down_8|NZ_CP011388.1_1772373_1774911_+	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|307aa|down_9|NZ_CP011388.1_1775070_1775991_+	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR)
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	4	1962047-1962157	4	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	AGGGATAACCCGGCATGGAGCATTTTGCAGATAA	34	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA,NA	NA|359aa|up_9|NZ_CP011388.1_1948280_1949357_-	pfam07885, Ion_trans_2, Ion channel	NA|575aa|up_8|NZ_CP011388.1_1949392_1951117_-	pfam13360, PQQ_2, PQQ-like domain	NA|457aa|up_7|NZ_CP011388.1_1951524_1952895_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|324aa|up_6|NZ_CP011388.1_1953007_1953979_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|590aa|up_5|NZ_CP011388.1_1954009_1955779_-	pfam13311, DUF4080, Protein of unknown function (DUF4080)	NA|300aa|up_4|NZ_CP011388.1_1955907_1956807_-	PRK10296, PRK10296, DNA-binding transcriptional regulator ChbR; Provisional	NA|936aa|up_3|NZ_CP011388.1_1956945_1959753_+	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8	NA|70aa|up_2|NZ_CP011388.1_1959800_1960010_-	pfam18395, Cas3_C, Cas3 C-terminal domain	NA|224aa|up_1|NZ_CP011388.1_1960114_1960786_-	PRK00043, thiE, thiamine phosphate synthase	NA|315aa|up_0|NZ_CP011388.1_1960782_1961727_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|285aa|down_0|NZ_CP011388.1_1962175_1963030_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|68aa|down_1|NZ_CP011388.1_1963038_1963242_-	PRK07696, PRK07696, thiamine biosynthesis protein ThiS	NA|387aa|down_2|NZ_CP011388.1_1963297_1964458_-	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|246aa|down_3|NZ_CP011388.1_1964454_1965192_-	PRK07695, PRK07695, thiazole tautomerase TenI	NA|591aa|down_4|NZ_CP011388.1_1965287_1967060_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|370aa|down_5|NZ_CP011388.1_1967386_1968496_-	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family	NA|366aa|down_6|NZ_CP011388.1_1968485_1969583_-	pfam03845, Spore_permease, Spore germination protein	NA|480aa|down_7|NZ_CP011388.1_1969589_1971029_-	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein	NA|439aa|down_8|NZ_CP011388.1_1971204_1972521_+	pfam13204, DUF4038, Protein of unknown function (DUF4038)	NA|367aa|down_9|NZ_CP011388.1_1972677_1973778_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	5	2342721-2342907	5	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	TTAAGTAGTGTTTCACTACTTAA	23	0	0	NA	NA	NA	3	3	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA|729aa|up_2|NZ_CP011388.1_2337005_2339192_+,NA|175aa|up_1|NZ_CP011388.1_2339224_2339749_-,NA|49aa|down_4|NZ_CP011388.1_2350584_2350731_-,NA|175aa|down_8|NZ_CP011388.1_2356231_2356756_+	NA|502aa|up_9|NZ_CP011388.1_2324379_2325885_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|599aa|up_8|NZ_CP011388.1_2326018_2327815_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|475aa|up_7|NZ_CP011388.1_2327807_2329232_+	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|572aa|up_6|NZ_CP011388.1_2329376_2331092_+	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold	NA|297aa|up_5|NZ_CP011388.1_2331171_2332062_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|296aa|up_4|NZ_CP011388.1_2332080_2332968_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|1312aa|up_3|NZ_CP011388.1_2333036_2336972_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|729aa|up_2|NZ_CP011388.1_2337005_2339192_+	NA	NA|175aa|up_1|NZ_CP011388.1_2339224_2339749_-	NA	NA|727aa|up_0|NZ_CP011388.1_2340223_2342404_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1075aa|down_0|NZ_CP011388.1_2343486_2346711_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|298aa|down_1|NZ_CP011388.1_2346746_2347640_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|510aa|down_2|NZ_CP011388.1_2347709_2349239_-	cd18820, GH43_LbAraf43-like, Glycosyl hydrolase family 43 proteins similar to Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43 and Geobacillus thermoleovorans GbtXyl43B	NA|290aa|down_3|NZ_CP011388.1_2349407_2350277_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|49aa|down_4|NZ_CP011388.1_2350584_2350731_-	NA	NA|299aa|down_5|NZ_CP011388.1_2350887_2351784_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|828aa|down_6|NZ_CP011388.1_2351896_2354380_-	pfam02018, CBM_4_9, Carbohydrate binding domain	NA|491aa|down_7|NZ_CP011388.1_2354678_2356151_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|175aa|down_8|NZ_CP011388.1_2356231_2356756_+	NA	NA|131aa|down_9|NZ_CP011388.1_2356781_2357174_+	pfam10694, DUF2500, Protein of unknown function (DUF2500)
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	6	2343006-2343191	6	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	TTAAGTAGTGTTTCACTACTTAA	23	0	0	NA	NA	NA	3	3	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA|729aa|up_2|NZ_CP011388.1_2337005_2339192_+,NA|175aa|up_1|NZ_CP011388.1_2339224_2339749_-,NA|49aa|down_4|NZ_CP011388.1_2350584_2350731_-,NA|175aa|down_8|NZ_CP011388.1_2356231_2356756_+	NA|502aa|up_9|NZ_CP011388.1_2324379_2325885_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|599aa|up_8|NZ_CP011388.1_2326018_2327815_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|475aa|up_7|NZ_CP011388.1_2327807_2329232_+	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|572aa|up_6|NZ_CP011388.1_2329376_2331092_+	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold	NA|297aa|up_5|NZ_CP011388.1_2331171_2332062_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|296aa|up_4|NZ_CP011388.1_2332080_2332968_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|1312aa|up_3|NZ_CP011388.1_2333036_2336972_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|729aa|up_2|NZ_CP011388.1_2337005_2339192_+	NA	NA|175aa|up_1|NZ_CP011388.1_2339224_2339749_-	NA	NA|727aa|up_0|NZ_CP011388.1_2340223_2342404_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1075aa|down_0|NZ_CP011388.1_2343486_2346711_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|298aa|down_1|NZ_CP011388.1_2346746_2347640_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|510aa|down_2|NZ_CP011388.1_2347709_2349239_-	cd18820, GH43_LbAraf43-like, Glycosyl hydrolase family 43 proteins similar to Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43 and Geobacillus thermoleovorans GbtXyl43B	NA|290aa|down_3|NZ_CP011388.1_2349407_2350277_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|49aa|down_4|NZ_CP011388.1_2350584_2350731_-	NA	NA|299aa|down_5|NZ_CP011388.1_2350887_2351784_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|828aa|down_6|NZ_CP011388.1_2351896_2354380_-	pfam02018, CBM_4_9, Carbohydrate binding domain	NA|491aa|down_7|NZ_CP011388.1_2354678_2356151_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|175aa|down_8|NZ_CP011388.1_2356231_2356756_+	NA	NA|131aa|down_9|NZ_CP011388.1_2356781_2357174_+	pfam10694, DUF2500, Protein of unknown function (DUF2500)
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	7	2802096-2802170	7	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	TTCTAAGGAACTCCAGTAACGCTAA	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA|87aa|up_8|NZ_CP011388.1_2792314_2792575_-,NA|119aa|up_7|NZ_CP011388.1_2792559_2792916_-,NA|90aa|up_6|NZ_CP011388.1_2794106_2794376_+,NA|26aa|up_5|NZ_CP011388.1_2794526_2794604_+,NA|97aa|down_5|NZ_CP011388.1_2809535_2809826_-	NA|289aa|up_9|NZ_CP011388.1_2790991_2791858_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|87aa|up_8|NZ_CP011388.1_2792314_2792575_-	NA	NA|119aa|up_7|NZ_CP011388.1_2792559_2792916_-	NA	NA|90aa|up_6|NZ_CP011388.1_2794106_2794376_+	NA	NA|26aa|up_5|NZ_CP011388.1_2794526_2794604_+	NA	NA|560aa|up_4|NZ_CP011388.1_2794637_2796317_+	pfam03814, KdpA, Potassium-transporting ATPase A subunit	NA|682aa|up_3|NZ_CP011388.1_2796335_2798381_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|201aa|up_2|NZ_CP011388.1_2798407_2799010_+	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|788aa|up_1|NZ_CP011388.1_2799044_2801408_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|170aa|up_0|NZ_CP011388.1_2801490_2802000_+	pfam11181, YflT, Heat induced stress protein YflT	NA|467aa|down_0|NZ_CP011388.1_2802513_2803914_+	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold	NA|294aa|down_1|NZ_CP011388.1_2804004_2804886_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|277aa|down_2|NZ_CP011388.1_2804885_2805716_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|607aa|down_3|NZ_CP011388.1_2805745_2807566_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|543aa|down_4|NZ_CP011388.1_2807965_2809594_+	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|97aa|down_5|NZ_CP011388.1_2809535_2809826_-	NA	NA|772aa|down_6|NZ_CP011388.1_2810284_2812600_+	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins	NA|256aa|down_7|NZ_CP011388.1_2812792_2813560_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|354aa|down_8|NZ_CP011388.1_2813572_2814634_+	TIGR01728, Putative_aliphatic_sulfonates-binding_protein, ABC transporter, substrate-binding protein, aliphatic sulfonates family	NA|292aa|down_9|NZ_CP011388.1_2814633_2815509_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	8	2838852-2839043	1	PILER-CR	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	CACAAGATATCCCCACGACTCAGC	24	0	0	NA	NA	NA	2	2	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA,NA|68aa|down_7|NZ_CP011388.1_2847999_2848203_-	NA|324aa|up_9|NZ_CP011388.1_2815546_2816518_+	PRK09553, tauD, taurine dioxygenase; Reviewed	NA|316aa|up_8|NZ_CP011388.1_2816593_2817541_-	PRK02308, uvsE, putative UV damage endonuclease; Provisional	NA|321aa|up_7|NZ_CP011388.1_2817623_2818586_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|4094aa|up_6|NZ_CP011388.1_2818838_2831120_+	NF012211, tand_rpt_95, tandem-95 repeat protein	NA|394aa|up_5|NZ_CP011388.1_2831324_2832506_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|261aa|up_4|NZ_CP011388.1_2832542_2833325_-	TIGR03951, Fe_III_red_FhuF, siderophore-iron reductase FhuF	NA|286aa|up_3|NZ_CP011388.1_2833590_2834448_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|335aa|up_2|NZ_CP011388.1_2834608_2835613_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|708aa|up_1|NZ_CP011388.1_2835612_2837736_+	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB	NA|222aa|up_0|NZ_CP011388.1_2837845_2838511_+	COG0800, Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]	NA|487aa|down_0|NZ_CP011388.1_2839136_2840597_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|478aa|down_1|NZ_CP011388.1_2841116_2842550_+	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism]	NA|193aa|down_2|NZ_CP011388.1_2842688_2843267_+	PRK09415, PRK09415, RNA polymerase factor sigma C; Reviewed	NA|530aa|down_3|NZ_CP011388.1_2843253_2844843_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|475aa|down_4|NZ_CP011388.1_2844802_2846227_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|237aa|down_5|NZ_CP011388.1_2846414_2847125_+	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues	NA|274aa|down_6|NZ_CP011388.1_2847181_2848003_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|68aa|down_7|NZ_CP011388.1_2847999_2848203_-	NA	NA|110aa|down_8|NZ_CP011388.1_2848405_2848735_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|182aa|down_9|NZ_CP011388.1_2848727_2849273_+	pfam08006, DUF1700, Protein of unknown function (DUF1700)
GCF_001644605.1_ASM164460v1	NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	9	4772299-4772484	8	CRISPRCasFinder	no		WYL,DEDDh,RT,DinG,csa3,cas3	Orphan	TTTGTAGCGATATCGCTACTAAT	23	0	0	NA	NA	NA	3	3	Orphan	WYL,DEDDh,RT,DinG,csa3,cas3	NA|120aa|up_2|NZ_CP011388.1_4769473_4769833_-,NA|184aa|up_0|NZ_CP011388.1_4771635_4772187_-,NA|201aa|down_0|NZ_CP011388.1_4772736_4773339_-	NA|298aa|up_9|NZ_CP011388.1_4760949_4761843_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|438aa|up_8|NZ_CP011388.1_4761911_4763225_-	PRK08248, PRK08248, homocysteine synthase	NA|237aa|up_7|NZ_CP011388.1_4763373_4764084_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|598aa|up_6|NZ_CP011388.1_4764150_4765944_-	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK	NA|305aa|up_5|NZ_CP011388.1_4766030_4766945_-	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|548aa|up_4|NZ_CP011388.1_4767016_4768660_-	pfam05681, Fumerase, Fumarate hydratase (Fumerase)	NA|194aa|up_3|NZ_CP011388.1_4768815_4769397_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|120aa|up_2|NZ_CP011388.1_4769473_4769833_-	NA	NA|512aa|up_1|NZ_CP011388.1_4770004_4771540_+	pfam05552, TM_helix, Conserved TM helix	NA|184aa|up_0|NZ_CP011388.1_4771635_4772187_-	NA	NA|201aa|down_0|NZ_CP011388.1_4772736_4773339_-	NA	NA|314aa|down_1|NZ_CP011388.1_4773462_4774404_-	PRK06223, PRK06223, malate dehydrogenase; Reviewed	NA|432aa|down_2|NZ_CP011388.1_4774493_4775789_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|372aa|down_3|NZ_CP011388.1_4775862_4776978_-	PRK14034, PRK14034, citrate synthase; Provisional	NA|508aa|down_4|NZ_CP011388.1_4777272_4778796_+	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|702aa|down_5|NZ_CP011388.1_4778817_4780923_-	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|374aa|down_6|NZ_CP011388.1_4781018_4782140_+	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI	NA|134aa|down_7|NZ_CP011388.1_4782155_4782557_-	pfam04186, FxsA, FxsA cytoplasmic membrane protein	NA|586aa|down_8|NZ_CP011388.1_4782641_4784399_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|319aa|down_9|NZ_CP011388.1_4784489_4785446_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
