The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	35102	54233	1738543	head	Vibrio_phage(21.05%)	31	NA	NA
WP_064085142.1|35102_36020_+	AAA family ATPase	NA	A0A2I7S9C3	Vibrio_phage	44.3	1.2e-58
WP_010944153.1|36019_36253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064088390.1|36265_36949_+	DUF3164 family protein	NA	A4JWM8	Burkholderia_virus	47.8	3.2e-56
WP_041603325.1|36959_37178_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010944158.1|37572_37791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944159.1|37793_37997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944160.1|37993_38329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944161.1|38337_38631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064083071.1|38632_39370_+	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	35.0	9.7e-27
WP_010944163.1|39369_39645_+	hypothetical protein	NA	A0A2P0P8L3	Salmonella_phage	49.3	1.6e-11
WP_010944164.1|39722_40193_+	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	43.2	1.1e-26
WP_064083073.1|40174_40543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064083074.1|40520_40985_+	regulatory protein GemA	NA	Q6QIE7	Burkholderia_phage	30.9	7.3e-12
WP_041603328.1|40981_41317_+	transcriptional regulator	NA	A0A2I7S9J0	Vibrio_phage	39.1	8.6e-07
WP_064088391.1|41393_41945_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	69.3	3.0e-73
WP_155727975.1|42000_42168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944171.1|42177_42408_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	74.6	9.4e-21
WP_010944172.1|42410_42695_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_010944174.1|42814_43045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944175.1|43041_43377_+	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
WP_041603330.1|43380_43680_+	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	54.1	1.2e-20
WP_010944177.1|43702_44272_+	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	46.4	5.9e-40
WP_155727976.1|44268_45831_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.5	1.2e-159
WP_064088393.1|47425_48757_+|head	phage head morphogenesis protein	head	C9DGN7	Escherichia_phage	41.8	6.6e-90
WP_010944180.1|48904_49348_+	phage virion morphogenesis protein	NA	G9BWH2	Planktothrix_phage	29.8	3.8e-10
WP_010944182.1|50590_51502_+|head	head protein	head	C9DGP2	Escherichia_phage	52.6	2.0e-82
WP_010944183.1|51576_51957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944184.1|51956_52376_+	DUF1320 domain-containing protein	NA	A0A0C4UR02	Shigella_phage	36.0	8.8e-17
WP_010944185.1|52375_53029_+	DUF1834 family protein	NA	C9DGP5	Escherichia_phage	39.8	1.5e-15
WP_010944186.1|53018_53759_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	50.6	1.6e-61
WP_010944187.1|53804_54233_+	hypothetical protein	NA	L7P7Y2	Pseudomonas_phage	40.5	3.7e-18
>prophage 2
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	57723	66347	1738543		Pseudomonas_phage(71.43%)	7	NA	NA
WP_064088394.1|57723_58716_+	hypothetical protein	NA	A0A0U5KTG0	unidentified_phage	33.0	1.1e-38
WP_010944195.1|58717_59683_+	hypothetical protein	NA	A0A0U2KZ01	Pseudomonas_phage	27.3	2.6e-19
WP_064088395.1|59688_61380_+	hypothetical protein	NA	J9STL4	Pseudomonas_phage	38.2	2.6e-91
WP_064088396.1|61417_62227_+	DUF2163 domain-containing protein	NA	A0A2D1GNT2	Pseudomonas_phage	51.5	1.6e-75
WP_010944200.1|62236_62485_+	hypothetical protein	NA	A0A2D1GNV4	Pseudomonas_phage	58.0	9.2e-22
WP_010944201.1|62488_62695_+	hypothetical protein	NA	A0A125SA59	Pseudomonas_phage	42.6	1.5e-06
WP_010944205.1|65516_66347_+	hypothetical protein	NA	F6MIM2	Haemophilus_phage	71.6	3.3e-116
>prophage 3
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	403208	425720	1738543	head	Haemophilus_phage(37.5%)	32	NA	NA
WP_010944491.1|403208_403415_+	hypothetical protein	NA	F6MII8	Haemophilus_phage	47.4	8.5e-05
WP_064083113.1|403401_403746_+	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	54.9	7.0e-20
WP_010944493.1|403756_404374_+	DUF3164 family protein	NA	A0A0M3LQ92	Mannheimia_phage	79.9	2.7e-91
WP_041603377.1|404457_404676_+	ANR family transcriptional regulator	NA	A0A0M3LSH0	Mannheimia_phage	58.1	1.4e-05
WP_010944495.1|404679_404859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064088429.1|404877_405174_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944497.1|405170_405374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050711635.1|405383_405653_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_064088430.1|405710_406277_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	73.4	4.5e-72
WP_010944500.1|406260_406689_+	regulatory protein GemA	NA	F6MIJ6	Haemophilus_phage	65.0	1.5e-43
WP_010944502.1|407608_407818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944503.1|407946_408369_+	hypothetical protein	NA	F6MIJ8	Haemophilus_phage	67.6	1.9e-51
WP_041603380.1|408456_409005_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	72.6	2.9e-76
WP_010944505.1|409009_409363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944506.1|409349_409583_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	88.0	4.7e-28
WP_010944507.1|409582_409972_+	DUF2681 domain-containing protein	NA	A0A0M3LP93	Mannheimia_phage	43.5	9.1e-16
WP_010944508.1|410020_410299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944509.1|410295_410550_+	hypothetical protein	NA	A0A0M3LP87	Mannheimia_phage	54.8	2.4e-17
WP_010944510.1|410557_411058_+	DUF1804 family protein	NA	A0A0M3LQI8	Mannheimia_phage	90.4	8.5e-75
WP_010944512.1|412796_414434_+	DUF935 domain-containing protein	NA	B7SDN1	Haemophilus_phage	79.5	2.0e-253
WP_064088431.1|414417_415728_+|head	phage head morphogenesis protein	head	B7SDN5	Haemophilus_phage	67.1	2.7e-165
WP_010944514.1|415860_416277_+	phage virion morphogenesis protein	NA	A0A0M3LSP9	Mannheimia_phage	76.6	5.3e-54
WP_064088432.1|416530_417601_+	hypothetical protein	NA	B7SDN9	Haemophilus_phage	78.1	8.6e-149
WP_064088433.1|417600_418524_+|head	head protein	head	B7SDP1	Haemophilus_phage	83.1	7.1e-144
WP_010944517.1|418570_418858_+	hypothetical protein	NA	A0A0M3LPR6	Mannheimia_phage	70.0	1.9e-18
WP_010944518.1|418860_419247_+	DUF1320 domain-containing protein	NA	A0A2D1GNP0	Pseudomonas_phage	44.5	7.9e-20
WP_010944519.1|419243_419690_+	hypothetical protein	NA	A0A075CI80	Pseudomonas_phage	32.2	2.6e-14
WP_064088434.1|419720_420464_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	49.8	2.7e-61
WP_064088435.1|420521_420941_+	hypothetical protein	NA	A0A2D1GNY5	Pseudomonas_phage	40.2	3.1e-22
WP_064088436.1|421117_421372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064088437.1|421386_424722_+	tape measure protein	NA	A0A2D1GNK1	Pseudomonas_phage	30.5	1.6e-108
WP_064088438.1|424721_425720_+	hypothetical protein	NA	L7P7R6	Pseudomonas_phage	32.2	1.7e-34
>prophage 4
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	440324	455665	1738543		Streptomyces_phage(14.29%)	11	NA	NA
WP_064088442.1|440324_443801_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	37.1	2.7e-191
WP_010944541.1|443912_444995_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010944542.1|444995_446099_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_010944544.1|446425_447925_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.7	8.0e-52
WP_010944545.1|447994_448624_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A218M2Y8	Acidovorax_phage	33.6	2.2e-11
WP_010944546.1|448623_449046_-	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	37.7	4.3e-19
WP_010944547.1|449038_449713_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	47.7	3.2e-53
WP_064088443.1|450077_451118_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.6	9.7e-73
WP_010944551.1|451173_451461_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_010944552.1|451589_453017_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010944553.1|453094_455665_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	34.1	4.2e-125
>prophage 5
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	524862	535444	1738543		uncultured_Caudovirales_phage(28.57%)	10	NA	NA
WP_041603563.1|524862_525771_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.5	5.2e-22
WP_064083123.1|525782_527846_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	35.8	2.9e-44
WP_010945597.1|527873_528413_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.0	6.0e-26
WP_010945596.1|528618_529377_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	26.6	3.0e-15
WP_010945595.1|529373_530279_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010945594.1|530349_530685_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	56.8	1.0e-28
WP_010945593.1|530746_531412_-	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	54.8	1.8e-48
WP_041603561.1|531597_532149_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_064083124.1|532235_534074_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_064088449.1|534151_535444_+	purine permease	NA	Q9KX94	Enterobacteria_phage	28.4	2.6e-22
>prophage 6
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	1071341	1077854	1738543		Staphylococcus_phage(50.0%)	7	NA	NA
WP_041603676.1|1071341_1072643_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	32.6	2.0e-30
WP_010945071.1|1072734_1073670_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.8	4.1e-38
WP_010945070.1|1073677_1074166_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010945068.1|1074253_1074715_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.1	8.7e-42
WP_010945067.1|1074824_1076030_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	8.5e-105
WP_010945066.1|1076085_1076733_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.9	8.0e-41
WP_010945065.1|1076747_1077854_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.7	3.7e-46
>prophage 7
NZ_CP015431	[Haemophilus] ducreyi strain GHA3, complete genome	1738543	1154636	1169680	1738543		uncultured_Mediterranean_phage(12.5%)	15	NA	NA
WP_010945007.1|1154636_1155146_+	peptidyl-prolyl cis-trans isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	35.4	2.5e-13
WP_010945006.1|1155249_1156488_+	multifunctional CCA addition/repair protein	NA	S5MVS8	Sinorhizobium_phage	46.0	1.6e-82
WP_010945005.1|1156500_1157310_+	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_041603474.1|1157348_1157543_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_064088544.1|1157542_1157884_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010945002.1|1157895_1159749_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.8	4.8e-107
WP_010945001.1|1159800_1160433_-	DUF2625 family protein	NA	NA	NA	NA	NA
WP_010945000.1|1160477_1160999_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_010944999.1|1161007_1161331_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	9.8e-24
WP_010944998.1|1161464_1161848_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	75.8	1.7e-51
WP_064083187.1|1161895_1163116_-	IscS subfamily cysteine desulfurase	NA	A0A2K9L679	Tupanvirus	24.7	4.9e-15
WP_064088545.1|1163169_1163622_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_041603472.1|1164049_1165387_+	membrane protein	NA	NA	NA	NA	NA
WP_010944993.1|1165450_1166008_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.1	3.8e-31
WP_010944992.1|1166083_1169680_-	exodeoxyribonuclease V subunit beta	NA	A7KV33	Bacillus_phage	21.5	1.0e-12
