assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001648135.1_ASM164813v1	NZ_CP015226	Bacillus sp. IHB B 7164 chromosome, complete genome	1	355210-355369	1	CRISPRCasFinder	no		cas3,DinG,csa3,RT,DEDDh,WYL	Orphan	CAAAATGCTCAAGCATCTAAAAACAACTTCGGTACTGAATTTGGTAGCGAAACAA	55	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,RT,DEDDh,WYL	NA|75aa|up_1|NZ_CP015226.1_353964_354189_-,NA|58aa|down_4|NZ_CP015226.1_359996_360170_-,NA|131aa|down_9|NZ_CP015226.1_364492_364885_+	NA|301aa|up_9|NZ_CP015226.1_347764_348667_-	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	NA|270aa|up_8|NZ_CP015226.1_348762_349572_+	PRK14135, recX, recombination regulator RecX; Provisional	NA|218aa|up_7|NZ_CP015226.1_349862_350516_-	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR	NA|105aa|up_6|NZ_CP015226.1_350598_350913_+	pfam08838, DUF1811, Protein of unknown function (DUF1811)	NA|52aa|up_5|NZ_CP015226.1_350991_351147_-	pfam08176, SspK, Small acid-soluble spore protein K family	NA|90aa|up_4|NZ_CP015226.1_351282_351552_+	pfam14043, WVELL, WVELL protein	NA|327aa|up_3|NZ_CP015226.1_351615_352596_-	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|365aa|up_2|NZ_CP015226.1_352835_353930_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|75aa|up_1|NZ_CP015226.1_353964_354189_-	NA	NA|251aa|up_0|NZ_CP015226.1_354302_355055_+	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|87aa|down_0|NZ_CP015226.1_355635_355896_+	pfam14182, YgaB, YgaB-like protein	NA|179aa|down_1|NZ_CP015226.1_356091_356628_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|584aa|down_2|NZ_CP015226.1_356797_358549_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|363aa|down_3|NZ_CP015226.1_358584_359673_-	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|58aa|down_4|NZ_CP015226.1_359996_360170_-	NA	NA|433aa|down_5|NZ_CP015226.1_360306_361605_-	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional	NA|338aa|down_6|NZ_CP015226.1_361807_362821_+	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA	NA|264aa|down_7|NZ_CP015226.1_362813_363605_+	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|262aa|down_8|NZ_CP015226.1_363614_364400_+	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|131aa|down_9|NZ_CP015226.1_364492_364885_+	NA
GCF_001648135.1_ASM164813v1	NZ_CP015226	Bacillus sp. IHB B 7164 chromosome, complete genome	2	938039-938134	2	CRISPRCasFinder	no		cas3,DinG,csa3,RT,DEDDh,WYL	Orphan	TGTAACTATAATGGTTACAACAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,RT,DEDDh,WYL	NA,NA|60aa|down_4|NZ_CP015226.1_941811_941991_+	NA|327aa|up_9|NZ_CP015226.1_925400_926381_+	cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|207aa|up_8|NZ_CP015226.1_926574_927195_+	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain	NA|299aa|up_7|NZ_CP015226.1_927710_928607_+	PRK12548, PRK12548, shikimate dehydrogenase	NA|435aa|up_6|NZ_CP015226.1_929249_930554_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|403aa|up_5|NZ_CP015226.1_930665_931874_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|319aa|up_4|NZ_CP015226.1_931873_932830_+	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain	NA|483aa|up_3|NZ_CP015226.1_932979_934428_+	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1	NA|292aa|up_2|NZ_CP015226.1_934519_935395_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|443aa|up_1|NZ_CP015226.1_936158_937487_+	cd01293, Bact_CD, Bacterial cytosine deaminase and related metal-dependent hydrolases	NA|66aa|up_0|NZ_CP015226.1_937534_937732_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|211aa|down_0|NZ_CP015226.1_938155_938788_+	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]	NA|329aa|down_1|NZ_CP015226.1_938960_939947_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|181aa|down_2|NZ_CP015226.1_940559_941102_+	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides	NA|148aa|down_3|NZ_CP015226.1_941219_941663_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|60aa|down_4|NZ_CP015226.1_941811_941991_+	NA	NA|204aa|down_5|NZ_CP015226.1_942188_942800_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|49aa|down_6|NZ_CP015226.1_942792_942939_+	pfam12841, YvrJ, YvrJ protein family	NA|76aa|down_7|NZ_CP015226.1_942943_943171_+	PRK14082, PRK14082, hypothetical protein; Provisional	NA|475aa|down_8|NZ_CP015226.1_943652_945077_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|58aa|down_9|NZ_CP015226.1_945105_945279_-	PRK14861, tatA, twin arginine translocase protein A; Provisional
GCF_001648135.1_ASM164813v1	NZ_CP015226	Bacillus sp. IHB B 7164 chromosome, complete genome	3	1038702-1038782	3	CRISPRCasFinder	no	csa3	cas3,DinG,csa3,RT,DEDDh,WYL	Type I-A	ATAATGAATGATAGTCATTCATT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,RT,DEDDh,WYL	NA|73aa|up_6|NZ_CP015226.1_1030409_1030628_+,NA|87aa|up_5|NZ_CP015226.1_1030624_1030885_+,NA|93aa|up_1|NZ_CP015226.1_1035414_1035693_-,NA	csa3|88aa|up_9|NZ_CP015226.1_1028043_1028307_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|213aa|up_8|NZ_CP015226.1_1028307_1028946_+	COG5658, COG5658, Predicted integral membrane protein [Function unknown]	NA|331aa|up_7|NZ_CP015226.1_1029094_1030087_-	pfam11553, DUF3231, Protein of unknown function (DUF3231)	NA|73aa|up_6|NZ_CP015226.1_1030409_1030628_+	NA	NA|87aa|up_5|NZ_CP015226.1_1030624_1030885_+	NA	NA|844aa|up_4|NZ_CP015226.1_1031166_1033698_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|215aa|up_3|NZ_CP015226.1_1033755_1034400_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|310aa|up_2|NZ_CP015226.1_1034448_1035378_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|93aa|up_1|NZ_CP015226.1_1035414_1035693_-	NA	NA|815aa|up_0|NZ_CP015226.1_1035899_1038344_+	cd01948, EAL, EAL domain	NA|460aa|down_0|NZ_CP015226.1_1038849_1040229_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|291aa|down_1|NZ_CP015226.1_1040281_1041154_+	cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases)	NA|374aa|down_2|NZ_CP015226.1_1041192_1042314_+	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII	NA|243aa|down_3|NZ_CP015226.1_1042880_1043609_-	PRK12804, PRK12804, flagellin; Provisional	NA|214aa|down_4|NZ_CP015226.1_1043838_1044480_-	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional	NA|322aa|down_5|NZ_CP015226.1_1044494_1045460_-	pfam06166, DUF979, Protein of unknown function (DUF979)	NA|235aa|down_6|NZ_CP015226.1_1045460_1046165_-	pfam06149, DUF969, Protein of unknown function (DUF969)	NA|304aa|down_7|NZ_CP015226.1_1046541_1047453_+	pfam12773, DZR, Double zinc ribbon	NA|490aa|down_8|NZ_CP015226.1_1047517_1048987_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|186aa|down_9|NZ_CP015226.1_1049094_1049652_-	pfam04982, HPP, HPP family
GCF_001648135.1_ASM164813v1	NZ_CP015226	Bacillus sp. IHB B 7164 chromosome, complete genome	4	1378831-1379193	1	CRT	no	DinG,cas3	cas3,DinG,csa3,RT,DEDDh,WYL	Unclear	GNCGAGAAGANCGGCGAG	18	2	5	1379014-1379043|1379014-1379043|1379014-1379043|1379158-1379175|1379158-1379175	NZ_CP015226.1_1174555-1174584|NZ_CP015226.1_1174567-1174596|NZ_CP015226.1_1174579-1174608|NZ_CP015226.1_1379182-1379199|NZ_CP015226.1_1379194-1379211	NA	8	8	Unclear	cas3,DinG,csa3,RT,DEDDh,WYL	NA|167aa|up_9|NZ_CP015226.1_1370885_1371386_+,NA|85aa|up_5|NZ_CP015226.1_1376340_1376595_+,NA|57aa|up_3|NZ_CP015226.1_1377346_1377517_-,NA|49aa|up_0|NZ_CP015226.1_1378512_1378659_-,NA|373aa|down_1|NZ_CP015226.1_1380709_1381828_+,NA|221aa|down_2|NZ_CP015226.1_1381892_1382555_+,NA|89aa|down_5|NZ_CP015226.1_1385257_1385524_-,NA|56aa|down_9|NZ_CP015226.1_1388906_1389074_+	NA|167aa|up_9|NZ_CP015226.1_1370885_1371386_+	NA	NA|949aa|up_8|NZ_CP015226.1_1371421_1374268_-	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|200aa|up_7|NZ_CP015226.1_1374331_1374931_-	PRK02234, recU, Holliday junction-specific endonuclease; Reviewed	NA|332aa|up_6|NZ_CP015226.1_1375004_1376000_+	pfam10720, DUF2515, Protein of unknown function (DUF2515)	NA|85aa|up_5|NZ_CP015226.1_1376340_1376595_+	NA	NA|117aa|up_4|NZ_CP015226.1_1376640_1376991_+	pfam08807, DUF1798, Bacterial domain of unknown function (DUF1798)	NA|57aa|up_3|NZ_CP015226.1_1377346_1377517_-	NA	NA|65aa|up_2|NZ_CP015226.1_1377643_1377838_-	pfam14178, YppF, YppF-like protein	NA|138aa|up_1|NZ_CP015226.1_1378067_1378481_+	pfam14179, YppG, YppG-like protein	NA|49aa|up_0|NZ_CP015226.1_1378512_1378659_-	NA	NA|362aa|down_0|NZ_CP015226.1_1379493_1380579_+	COG5337, CotH, Spore coat assembly protein [Cell envelope biogenesis, outer membrane]	NA|373aa|down_1|NZ_CP015226.1_1380709_1381828_+	NA	NA|221aa|down_2|NZ_CP015226.1_1381892_1382555_+	NA	NA|382aa|down_3|NZ_CP015226.1_1382911_1384057_+	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme	NA|394aa|down_4|NZ_CP015226.1_1384040_1385222_+	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme	NA|89aa|down_5|NZ_CP015226.1_1385257_1385524_-	NA	NA|220aa|down_6|NZ_CP015226.1_1385586_1386246_-	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|493aa|down_7|NZ_CP015226.1_1386478_1387957_-	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|182aa|down_8|NZ_CP015226.1_1388249_1388795_-	TIGR02898, Uncharacterized_lipoprotein_YlaJ, sporulation lipoprotein, YhcN/YlaJ family	NA|56aa|down_9|NZ_CP015226.1_1388906_1389074_+	NA
GCF_001648135.1_ASM164813v1	NZ_CP015226	Bacillus sp. IHB B 7164 chromosome, complete genome	5	2048068-2048157	4	CRISPRCasFinder	no		cas3,DinG,csa3,RT,DEDDh,WYL	Orphan	TCAAATGCAGCCGCCAAGCGGTTC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,RT,DEDDh,WYL	NA|89aa|up_8|NZ_CP015226.1_2039106_2039373_-,NA|159aa|up_1|NZ_CP015226.1_2045010_2045487_-,NA	NA|200aa|up_9|NZ_CP015226.1_2038504_2039104_+	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|89aa|up_8|NZ_CP015226.1_2039106_2039373_-	NA	NA|475aa|up_7|NZ_CP015226.1_2039545_2040970_+	cd09111, PLDc_ymdC_like_1, Putative catalytic domain, repeat 1, of Escherichia coli uncharacterized protein ymdC and similar proteins	NA|171aa|up_6|NZ_CP015226.1_2041084_2041597_+	COG3981, COG3981, Predicted acetyltransferase [General function prediction only]	NA|144aa|up_5|NZ_CP015226.1_2042021_2042453_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|135aa|up_4|NZ_CP015226.1_2042646_2043051_+	PRK01658, PRK01658, CidA/LrgA family holin-like protein	NA|231aa|up_3|NZ_CP015226.1_2043020_2043713_+	pfam04172, LrgB, LrgB-like family	NA|291aa|up_2|NZ_CP015226.1_2043984_2044857_+	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation	NA|159aa|up_1|NZ_CP015226.1_2045010_2045487_-	NA	NA|191aa|up_0|NZ_CP015226.1_2045555_2046128_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|322aa|down_0|NZ_CP015226.1_2048654_2049620_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|135aa|down_1|NZ_CP015226.1_2049612_2050017_+	pfam04138, GtrA, GtrA-like protein	NA|296aa|down_2|NZ_CP015226.1_2050013_2050901_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|225aa|down_3|NZ_CP015226.1_2051045_2051720_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|460aa|down_4|NZ_CP015226.1_2051721_2053101_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|55aa|down_5|NZ_CP015226.1_2053473_2053638_+	pfam10055, DUF2292, Uncharacterized small protein (DUF2292)	NA|51aa|down_6|NZ_CP015226.1_2053980_2054133_+	pfam13076, Fur_reg_FbpA, Fur-regulated basic protein A	NA|355aa|down_7|NZ_CP015226.1_2054385_2055450_+	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|279aa|down_8|NZ_CP015226.1_2055544_2056381_+	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT	NA|289aa|down_9|NZ_CP015226.1_2056393_2057260_+	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]
GCF_001648135.1_ASM164813v1	NZ_CP015226	Bacillus sp. IHB B 7164 chromosome, complete genome	6	3188100-3188369	2	CRT	no		cas3,DinG,csa3,RT,DEDDh,WYL	Orphan	NTGATGCCANTGATTCCA	18	0	0	NA	NA	NA	7	7	Orphan	cas3,DinG,csa3,RT,DEDDh,WYL	NA|122aa|up_0|NZ_CP015226.1_3187379_3187745_-,NA|50aa|down_7|NZ_CP015226.1_3197676_3197826_-	NA|259aa|up_9|NZ_CP015226.1_3182674_3183451_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|75aa|up_8|NZ_CP015226.1_3183521_3183746_-	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD	NA|376aa|up_7|NZ_CP015226.1_3183781_3184909_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|184aa|up_6|NZ_CP015226.1_3184970_3185522_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|99aa|up_5|NZ_CP015226.1_3185577_3185874_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|119aa|up_4|NZ_CP015226.1_3185896_3186253_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|161aa|up_3|NZ_CP015226.1_3186280_3186763_-	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family	NA|76aa|up_2|NZ_CP015226.1_3186810_3187038_-	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD	NA|87aa|up_1|NZ_CP015226.1_3187129_3187390_-	cd10155, BsYrkD-like_DUF156, Uncharacterized protein YrkD from Bacillus subtilis and related domains; this domain superfamily was previously known as part of DUF156	NA|122aa|up_0|NZ_CP015226.1_3187379_3187745_-	NA	NA|260aa|down_0|NZ_CP015226.1_3189291_3190071_-	PRK08594, PRK08594, enoyl-[acyl-carrier-protein] reductase FabI	NA|291aa|down_1|NZ_CP015226.1_3190201_3191074_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|298aa|down_2|NZ_CP015226.1_3191188_3192082_+	pfam00892, EamA, EamA-like transporter family	NA|164aa|down_3|NZ_CP015226.1_3192764_3193256_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|237aa|down_4|NZ_CP015226.1_3193379_3194090_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|628aa|down_5|NZ_CP015226.1_3194258_3196142_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|480aa|down_6|NZ_CP015226.1_3196155_3197595_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|50aa|down_7|NZ_CP015226.1_3197676_3197826_-	NA	NA|466aa|down_8|NZ_CP015226.1_3198013_3199411_-	cd10323, SLC-NCS1sbd, nucleobase-cation-symport-1 (NCS1) transporters; solute-binding domain	NA|88aa|down_9|NZ_CP015226.1_3199653_3199917_-	pfam05901, Excalibur, Excalibur calcium-binding domain
