The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	376059	479944	2726366	protease,transposase,tRNA	Lysinibacillus_phage(28.0%)	90	NA	NA
WP_077272884.1|376059_377307_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_004870606.1|377303_378401_+	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	39.7	7.5e-07
WP_004870608.1|378400_379273_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_004870609.1|379256_380069_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_014002299.1|380086_382060_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_004870613.1|382065_382317_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	61.2	3.0e-20
WP_004870615.1|382354_382885_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	2.2e-25
WP_081254316.1|382881_383445_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_004870620.1|383545_384757_+	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	32.3	2.6e-13
WP_014002302.1|384753_385422_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	39.3	1.2e-31
WP_004870624.1|385418_386324_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004870626.1|386462_387320_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	39.9	2.5e-42
WP_004870628.1|387316_387649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002303.1|387813_388893_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_014002304.1|388965_390291_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	29.1	9.2e-44
WP_014002305.1|390293_390836_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_014002306.1|390835_391789_-	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	36.2	7.2e-14
WP_004870639.1|391795_392485_-	DUF484 family protein	NA	NA	NA	NA	NA
WP_014002307.1|392481_393354_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_014002308.1|393550_394465_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014002309.1|394522_395257_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014002310.1|395269_395503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002311.1|395973_397167_+	porin	NA	NA	NA	NA	NA
WP_149712606.1|397438_400444_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
WP_014002313.1|400522_401629_-	cellulase	NA	NA	NA	NA	NA
WP_014002314.1|401663_402389_-	cellulose biosynthesis protein BcsS	NA	NA	NA	NA	NA
WP_014002315.1|402405_404943_-	cellulose synthase	NA	NA	NA	NA	NA
WP_149712607.1|404939_405560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149712608.1|405638_406538_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_081254391.1|406596_408282_-	UDP-forming cellulose synthase catalytic subunit	NA	M1I518	Acanthocystis_turfacea_Chlorella_virus	27.8	2.2e-21
WP_014002319.1|408545_409553_-	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_014002320.1|409627_410347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002321.1|410426_412265_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.6	3.5e-57
WP_014002322.1|412424_412628_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	60.6	2.1e-16
WP_103415101.1|413022_414036_+	transporter	NA	NA	NA	NA	NA
WP_014002164.1|416313_417837_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
WP_014002165.1|417845_418631_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
WP_014002330.1|418953_419613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306480.1|419674_420988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|421088_422303_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_148262238.1|422831_423536_+	C39 family peptidase	NA	NA	NA	NA	NA
WP_014002334.1|423557_424334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002335.1|424378_426025_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_012387019.1|426040_427255_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_012387019.1|427654_428869_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712609.1|428968_429817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002337.1|429788_431240_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_014002338.1|431938_433339_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_004872674.1|433390_434437_-|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	25.1	8.7e-13
WP_014002339.1|434541_436716_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_004870671.1|436944_437805_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_103415102.1|437807_438266_-	chorismate lyase	NA	NA	NA	NA	NA
WP_004870673.1|438554_439448_+	cation transporter	NA	A0A1V0SED0	Indivirus	26.2	1.9e-08
WP_014002341.1|439428_440010_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_004870675.1|440240_441551_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_041635797.1|441554_443261_+	glycoside hydrolase	NA	NA	NA	NA	NA
WP_014002343.1|443261_445271_+	DUF1926 domain-containing protein	NA	NA	NA	NA	NA
WP_004870678.1|445260_446208_+	ROK family protein	NA	NA	NA	NA	NA
WP_014002344.1|446316_447141_+	glutamate racemase	NA	NA	NA	NA	NA
WP_004870680.1|447127_447454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002345.1|447652_448942_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_014002346.1|449255_450767_+	YdiU family protein	NA	NA	NA	NA	NA
WP_081254317.1|450848_452198_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_081254318.1|452161_453190_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.5	1.3e-45
WP_014002349.1|453186_453696_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_014002350.1|453688_454567_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014002351.1|454613_456146_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_014002352.1|456523_457612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002536.1|458117_459335_+|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
WP_012387019.1|459427_460642_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_004872747.1|460724_461294_-	thioredoxin fold domain-containing protein	NA	NA	NA	NA	NA
WP_012387019.1|463141_464356_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014002361.1|464804_465149_-	OsmC family protein	NA	NA	NA	NA	NA
WP_014002362.1|465444_465783_-	DsrE family protein	NA	NA	NA	NA	NA
WP_014002363.1|465779_467069_-	MFS transporter	NA	NA	NA	NA	NA
WP_014002364.1|467065_467425_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014002365.1|467421_468159_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_038471990.1|468403_468937_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_103415104.1|469610_470177_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_041636688.1|470232_470460_-	SHOCT domain-containing protein	NA	NA	NA	NA	NA
WP_049784724.1|470456_470948_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014002371.1|470934_471600_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_014002372.1|471732_472122_+	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	30.3	3.3e-10
WP_014002373.1|472130_473084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872723.1|473210_473660_-	DUF2442 domain-containing protein	NA	NA	NA	NA	NA
WP_077272676.1|473656_473830_-	DUF4160 domain-containing protein	NA	NA	NA	NA	NA
WP_014003106.1|474247_476506_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.5	2.5e-89
WP_004872720.1|476537_476933_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_004872719.1|476988_477195_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_014002536.1|478726_479944_-|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
>prophage 2
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	508713	559016	2726366	integrase,transposase	Lysinibacillus_phage(22.22%)	44	540668:540727	553002:554420
WP_014003081.1|508713_509931_-|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	8.3e-07
WP_149712610.1|509990_510182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|510621_511836_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014003079.1|512398_513583_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_014003078.1|514216_514459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004872672.1|515201_516521_+|integrase	tyrosine-type recombinase/integrase	integrase	I6R9B6	Salmonella_phage	23.5	6.0e-11
WP_014003077.1|516517_517075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003076.1|517191_517386_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_004872669.1|517382_517607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003074.1|517686_518658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872666.1|518654_519767_+	AAA family ATPase	NA	A5A3V1	Burkholderia_phage	29.4	9.9e-15
WP_148262212.1|520250_520628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003071.1|520863_521835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004872663.1|521933_522116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041636397.1|522105_522918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149712611.1|522832_523879_-|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	25.1	8.7e-13
WP_148262211.1|523940_524927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872660.1|525173_525485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872659.1|525481_525790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872658.1|526294_528325_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_004872657.1|528439_530077_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.1	8.7e-161
WP_004872655.1|530073_530919_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	40.8	3.4e-52
WP_004872654.1|530915_532196_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	61.1	6.4e-143
WP_081254360.1|532324_532612_+	septum formation initiator	NA	NA	NA	NA	NA
WP_038471933.1|532618_533002_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_004872648.1|533013_533574_-	elongation factor P	NA	NA	NA	NA	NA
WP_004872647.1|533660_533975_+	DUF971 domain-containing protein	NA	NA	NA	NA	NA
WP_004872646.1|533996_535871_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_004872645.1|535870_536455_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_004872644.1|536734_537217_+	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_014003064.1|537498_539286_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
540668:540727	attL	GAGCTATGCTCGAATCTGGTGTACGGGAGGTCTACAACTAGCTTGAGGAGGGTGGCGCAC	NA	NA	NA	NA
WP_004868469.1|540780_542043_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.4e-89
WP_103415061.1|543263_544253_+	glycosyltransferase family 2 protein	NA	U5P087	Shigella_phage	51.8	2.2e-82
WP_103415060.1|544249_545287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|545275_546490_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_012387019.1|547143_548358_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_081254397.1|549484_550939_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_014003642.1|551320_552076_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	54.6	1.5e-67
WP_149712612.1|552087_552996_-|transposase	transposase	transposase	K4I413	Acidithiobacillus_phage	50.2	1.4e-80
WP_004868469.1|553114_554377_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.4e-89
WP_149712613.1|554394_555030_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	47.1	1.7e-43
553002:554420	attR	GAGCTATGCTCGAATCTGGTGTACGGGAGGTCTACAACTAGCTTGAGGAGGGTGGCGCACTGTTGCTAGAAAAGGGTTTCTGGATCCGATTCGCAACGAATGAGGAGTGCGCCATGCAAGAGAGTACTGGTTTCGACGGAGGAATGGGAGAGTTGGGCCTGAACATCGAGGGCTTATTGCGGCGGTCCGCGCGCCAGCTGATCCAACAGGCCATCGAGGGCGAGGTGCAGGTGCTGCTGGAGGAGTATGCCGCGGTACGCATGGTCGATGGTCGCCGGGCCGTCGTGCGGAATGGATATCTGCCGGAGCGGGAGATCCTGACAGCGGTCGGCCCCGTGCCTGTACAGGTCCCCAAGGTGCGAGACCGCTCCGGTTCGGGCGTGGTCTTCCGTTCTTCCCTGGTACCGCCCTACGTGCGCAAGTCGCGGACCGTGGCCGCAGCGCTCCCCTGGTTGTACCTGCACGGGGTATCGTCGGGACGGATGCACGAGGCGCTGTCTGTTCTCCTGGGCGAGGAGGCCAAGGGGCTTTCTCCGGCCGTGCTGGGACGCTTGAAAGTCGAATGGGCGCAAGAGCATGCCCAATGGCAGCGCCGGTCTCTACAGGGAAAACGCTACGCCTATTGGTGGGCCGACGGGGTCTATACCCAGCTGCGGGCGGAGGACGATCCCCGGATGTGTCTCTTGGTCATTATTGGCGTGACGGCCGAGGGCAAGAAGGAGGTCGTGGCGGTCACCGACGGTTTACGGGAGTCCAAAGCCTCCTGGCTAGAGATCCTGCGGGACTTGCGCGACCGCGGGCTGCAGGAGGCGCCACTACTGGCCATAGGAGATGGGGCGATGGGTTTCTGGGCCGCCCTGGACGAGATTTACCCACAAACCCGTCATCAGCGCTGTTGGGTGCACAAGACGGCCAACATCCTCAACGAGCTACCGAAGCGCCTTCAGGGGAAAGCCAAGGCCGCCCTGCAGGCGATCTGGATGGCCGACACCCGTGAAGCTGCGGAGAAAGCCTGGCAAGCCTTCGTGCGGGACTACCAGGCCAAATATCCCAGAGCGGTCGCAAAGCTCGAGAAGGACCGGGACGTGCTGCTGACCTTCTTCGACTTCCCGGCAGAGCACTGGCGGCATATCCGCAGCAGCAACGCCATCGAATCGACCTTCGCCACCGTACGGCAACGCAGCAGCCGCACTAAAAACTGTGTCTCTCGAGCCACTTTCCTTGGCCTGAGCTACAAGCTCATCCAGCAGGCAGAGAGACACTGGCGCGGGATTCAGCATCCGGAAAGACTGCGCGAGCTCTTTGCCGGGGTGACATTTGTCGATGGGATGCCTGCCAACGAAACCCGGCTGGATCCTCAACAGGACGCCGCCTGAATCGTGTTAGCAAATGCTCATACACCAATCTTGACCATAGCTC	NA	NA	NA	NA
WP_103415160.1|555155_556661_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_103415161.1|556650_557382_+	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	41.1	2.7e-37
WP_149712614.1|558059_559016_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	49.1	3.3e-75
>prophage 3
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	563817	629848	2726366	protease,integrase,tRNA,transposase	Lysinibacillus_phage(20.0%)	58	563749:563767	587199:587217
563749:563767	attL	TCCCACCCTCTCCGCCAAT	NA	NA	NA	NA
WP_149712616.1|563817_565605_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_149712617.1|566877_567675_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003062.1|568477_569533_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_014003057.1|571136_571547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041638206.1|571659_572328_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014003055.1|572458_572935_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014003054.1|573005_573500_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_014003731.1|573496_573955_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014003052.1|573967_574756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103415059.1|575112_575958_-	hypothetical protein	NA	A0A2I6PCS6	Staphylococcus_phage	30.4	4.4e-07
WP_014002174.1|576080_576377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004870126.1|576379_576760_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
WP_014002175.1|576768_578331_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
WP_014003050.1|578320_578632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306458.1|579654_580146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415058.1|580478_581000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|581003_582218_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415133.1|583058_583448_+	DedA family protein	NA	NA	NA	NA	NA
WP_012387019.1|583461_584676_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_081254347.1|585474_585717_+	DUF4168 domain-containing protein	NA	NA	NA	NA	NA
WP_014003043.1|587310_587880_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
587199:587217	attR	TCCCACCCTCTCCGCCAAT	NA	NA	NA	NA
WP_004872419.1|587884_590677_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_004872418.1|590956_591223_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_004872417.1|591261_592542_+	GTPase HflX	NA	NA	NA	NA	NA
WP_004872416.1|592557_593721_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_004872415.1|593717_594593_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_004872414.1|594589_595804_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_004872413.1|595825_597115_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.7	5.8e-67
WP_004872412.1|597297_598077_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014003042.1|598208_598988_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_014003041.1|599136_600198_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_004872408.1|600200_601595_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014003040.1|601627_606043_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
WP_014003039.1|606277_607453_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
WP_014003038.1|607449_608277_-	FAD-dependent thymidylate synthase	NA	A0A1C9C5C1	Heterosigma_akashiwo_virus	29.1	1.1e-23
WP_004872404.1|608278_609364_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_004872403.1|609436_609985_-	shikimate kinase	NA	NA	NA	NA	NA
WP_004872402.1|609987_612306_-	type IV pilus secretin PilQ family protein	NA	R9TEZ5	Vibrio_phage	26.0	1.5e-17
WP_004872401.1|612343_612886_-	pilus assembly protein PilQ	NA	NA	NA	NA	NA
WP_004872400.1|612882_613521_-	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA	NA
WP_004872399.1|613517_614105_-	pilus assembly protein PilN	NA	NA	NA	NA	NA
WP_014003037.1|614101_615148_-	type IV pilus assembly protein PilM	NA	NA	NA	NA	NA
WP_004872396.1|615364_615901_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_103415132.1|615909_616344_+	YjbQ family protein	NA	NA	NA	NA	NA
WP_004872387.1|616359_616785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872386.1|616794_618339_+	DNA mismatch repair protein MutS	NA	F2Y0V3	Organic_Lake_phycodnavirus	25.3	2.4e-11
WP_014003035.1|618477_620220_+	biosynthetic-type acetolactate synthase large subunit	NA	E5EQ70	Micromonas_sp._RCC1109_virus	32.5	1.9e-60
WP_014003034.1|620221_620716_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_004872383.1|620758_621775_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_004872382.1|621892_622555_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_014003033.1|622551_623301_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_014003032.1|623312_623966_-	DUF202 domain-containing protein	NA	NA	NA	NA	NA
WP_014003031.1|623981_625502_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA	NA
WP_014003030.1|625505_625781_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_014003029.1|625791_626979_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
WP_014003028.1|626965_628273_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
WP_041636382.1|628311_629094_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_014003026.1|629098_629848_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	646879	702604	2726366	transposase,tRNA	Klosneuvirus(14.29%)	37	NA	NA
WP_149712618.1|646879_649693_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.6	3.5e-77
WP_014003018.1|649671_650643_-	bifunctional riboflavin kinase/FAD synthetase	NA	A0A1V0SJE1	Klosneuvirus	33.9	8.6e-07
WP_014003017.1|650827_651853_+	phosphate ABC transporter substrate-binding protein PstS	NA	A0A2R8FF19	Brazilian_cedratvirus	27.5	8.2e-16
WP_004872346.1|652004_652913_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014003016.1|652909_653752_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_004872344.1|653861_654407_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_014003015.1|654403_655342_+	fructokinase	NA	NA	NA	NA	NA
WP_004872342.1|655354_657502_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_004872341.1|657494_659876_+	sucrose synthase	NA	NA	NA	NA	NA
WP_103415057.1|659802_660330_-	MerR family DNA-binding protein	NA	NA	NA	NA	NA
WP_064306548.1|660337_661954_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	30.1	8.7e-36
WP_004872338.1|662133_662754_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_004872337.1|662768_663215_-	host attachment protein	NA	NA	NA	NA	NA
WP_004872336.1|663398_664007_+	repressor LexA	NA	A0A1W6JNS2	Morganella_phage	37.6	1.8e-10
WP_064306549.1|664003_664669_+	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
WP_038472742.1|664687_666097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081254404.1|666080_669152_+	DNA polymerase III subunit alpha	NA	A0A096XUX6	Cronobacter_phage	30.2	4.4e-57
WP_064306550.1|669239_672296_+	GAF domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	27.0	4.0e-26
WP_014003050.1|674573_674885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002175.1|674874_676437_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
WP_004870126.1|676445_676826_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
WP_014002174.1|676828_677125_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|677828_679043_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_049784742.1|680049_680673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|681275_682490_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712619.1|682473_683925_-	MFS transporter	NA	NA	NA	NA	NA
WP_070118376.1|684286_684625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149712657.1|684986_686006_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_014002948.1|686914_690031_-	acriflavine resistance protein B	NA	NA	NA	NA	NA
WP_004868233.1|690055_691138_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_014003628.1|694118_694835_+	response regulator	NA	W8CYM9	Bacillus_phage	33.5	1.6e-29
WP_103415127.1|694864_696151_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_148262209.1|696249_697803_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA	NA
WP_014002953.1|697816_698902_+	quinol oxidase	NA	NA	NA	NA	NA
WP_004872674.1|699024_700071_-|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	25.1	8.7e-13
WP_014002954.1|700293_700707_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_014002539.1|701647_702604_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	49.7	3.9e-76
>prophage 5
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	717089	741107	2726366	transposase	Stx2-converting_phage(30.0%)	21	NA	NA
WP_014002937.1|717089_718652_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	30.3	1.3e-44
WP_004870695.1|718641_718953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149712620.1|718980_719241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002165.1|719146_719932_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
WP_014002164.1|719940_721464_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
WP_012387019.1|722518_723733_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712621.1|725108_726065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|727132_728347_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014002968.1|728684_729047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872175.1|729189_729603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002140.1|729754_730654_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_004870695.1|732156_732468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002603.1|732457_734020_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	30.3	1.3e-44
WP_004870126.1|734028_734409_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
WP_004867952.1|734411_734708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004870695.1|735497_735809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002937.1|735798_737361_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	30.3	1.3e-44
WP_004870126.1|737369_737750_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
WP_004867952.1|737752_738049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415056.1|738272_739808_-	APC family permease	NA	NA	NA	NA	NA
WP_012387019.1|739892_741107_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
>prophage 6
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	772556	840572	2726366	protease,tRNA,transposase	Lysinibacillus_phage(38.46%)	57	NA	NA
WP_012387019.1|772556_773771_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_038471830.1|774860_775688_+	CbbQ/NirQ/NorQ/GpvN family protein	NA	NA	NA	NA	NA
WP_064306503.1|775694_777965_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_004872232.1|778007_778553_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004872234.1|778549_780556_+	formate hydrogenlyase	NA	NA	NA	NA	NA
WP_012387019.1|780575_781790_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_004872235.1|781862_782810_+	formate hydrogenlyase	NA	NA	NA	NA	NA
WP_064306517.1|782822_783488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|784360_785575_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_064306519.1|786272_787796_+	hydrogenase	NA	NA	NA	NA	NA
WP_038471832.1|787827_788364_+	hydrogenase	NA	NA	NA	NA	NA
WP_038471834.1|788379_789303_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004872258.1|789648_790101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004872263.1|790404_791781_-	glutamate decarboxylase	NA	NA	NA	NA	NA
WP_004872265.1|791986_792586_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_064306516.1|792590_793973_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_004872268.1|793975_794554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306515.1|794553_795336_-	thiazole synthase	NA	NA	NA	NA	NA
WP_004872271.1|795372_795573_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_004872274.1|795705_796338_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004872276.1|796448_797141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004872277.1|797127_797688_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_004872279.1|797775_800418_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.6	2.6e-82
WP_004872281.1|800448_800931_-	regulatory protein RecX	NA	NA	NA	NA	NA
WP_004872284.1|800927_801971_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	65.9	8.4e-117
WP_004872285.1|802108_802834_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	43.4	1.6e-13
WP_004872288.1|802919_803933_-	thiamine-phosphate kinase	NA	NA	NA	NA	NA
WP_038471837.1|804034_804922_+|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
WP_038471839.1|805027_805813_+	FprA family A-type flavoprotein	NA	NA	NA	NA	NA
WP_004872295.1|805843_806194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002995.1|806238_806937_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_064306514.1|806955_807765_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_064306513.1|807854_810332_+	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_004872302.1|810334_810985_+	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_064306512.1|810993_812151_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_004872306.1|812320_812818_-	ATP synthase F1 subunit epsilon	NA	NA	NA	NA	NA
WP_081254395.1|812831_814856_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	43.1	8.1e-140
WP_004872308.1|814951_815641_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_064306511.1|815663_819128_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_004872311.1|819187_819613_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	51.0	2.0e-24
WP_064306510.1|819653_820904_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_064306509.1|820966_821683_-	endonuclease	NA	NA	NA	NA	NA
WP_064306508.1|821675_822542_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_014003003.1|822622_823930_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_004872320.1|824087_824621_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	35.0	3.9e-17
WP_064306507.1|824625_825438_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_014003006.1|825421_826636_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_004872323.1|826632_827295_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_081254394.1|827327_828011_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_014003007.1|828009_828669_+	hypothetical protein	NA	L7THX7	Halovirus	29.3	6.0e-12
WP_014003008.1|828694_829519_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004872327.1|829595_831860_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_064306506.1|831835_833104_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	38.9	1.0e-60
WP_012387019.1|834339_835554_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712622.1|836125_838159_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004872078.1|838222_839146_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_012387019.1|839357_840572_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
>prophage 7
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	1140777	1148236	2726366	transposase	Pseudomonas_phage(33.33%)	10	NA	NA
WP_064306340.1|1140777_1141398_-	helix-turn-helix domain-containing protein	NA	K7PLZ5	Enterobacterial_phage	36.4	2.6e-09
WP_064306341.1|1141483_1141720_+	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	43.8	2.3e-06
WP_014002804.1|1141967_1142255_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012387019.1|1142428_1143643_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712623.1|1143811_1144351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002802.1|1144347_1145514_+	ParB N-terminal domain-containing protein	NA	A0A1B0VME2	Pseudomonas_phage	46.0	5.8e-42
WP_041636310.1|1145510_1145699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002801.1|1145695_1146688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002800.1|1146684_1147518_+	hypothetical protein	NA	U6C6D0	Ralstonia_phage	32.2	3.0e-16
WP_038472165.1|1147819_1148236_+	RusA family crossover junction endodeoxyribonuclease	NA	H2BD71	Pseudomonas_phage	33.7	1.7e-07
>prophage 8
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	1218760	1350920	2726366	integrase,transposase	Lysinibacillus_phage(44.0%)	110	1285839:1285898	1324411:1325714
WP_012387019.1|1218760_1219975_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415027.1|1220022_1220514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002708.1|1220535_1220796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415026.1|1220875_1222834_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_103415025.1|1222843_1223623_-	conjugal transfer protein TrbJ	NA	NA	NA	NA	NA
WP_014002705.1|1224095_1225109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081254363.1|1225305_1225758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002703.1|1225895_1226240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004872944.1|1226688_1227522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004872948.1|1227957_1228359_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	48.5	4.0e-27
WP_014002702.1|1228355_1228550_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_064306398.1|1228876_1232380_-	conjugal transfer protein TrbE	NA	Q5G7M7	Listonella_phage	45.6	4.7e-79
WP_014002700.1|1232382_1232754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002699.1|1232772_1233165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306397.1|1233639_1233945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|1234241_1235456_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_141738309.1|1238229_1239942_+	hypothetical protein	NA	M1FPE6	Enterobacteria_phage	23.9	2.5e-09
WP_064306395.1|1239950_1241513_-	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	NA	NA	NA	NA	NA
WP_149712631.1|1241525_1242023_-	type IV pilus biogenesis protein PilM	NA	NA	NA	NA	NA
WP_004872967.1|1242252_1243203_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA	NA
WP_064306394.1|1243211_1243688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306393.1|1243725_1244826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306401.1|1244825_1246208_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA	NA
WP_064306392.1|1246457_1247033_-	type IV pilus biogenesis protein PilP	NA	NA	NA	NA	NA
WP_064306391.1|1247251_1248610_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_064306390.1|1248609_1250259_-	type IVB pilus formation outer membrane protein, R64 PilN family	NA	NA	NA	NA	NA
WP_081254361.1|1250573_1251176_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_014002687.1|1251893_1252685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306400.1|1252830_1253817_-	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
WP_041636181.1|1253855_1254314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041636176.1|1254468_1254762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002683.1|1254949_1255381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002682.1|1255412_1259174_+	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_012387019.1|1259547_1260762_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_041636169.1|1261277_1261682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306389.1|1261718_1262243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070114117.1|1262275_1262794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002677.1|1263162_1263579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|1263696_1264911_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415114.1|1265037_1265349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415113.1|1265463_1265997_-	uracil-DNA glycosylase	NA	NA	NA	NA	NA
WP_064306486.1|1266462_1266969_-	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	53.2	1.3e-38
WP_014002672.1|1267014_1267359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002671.1|1267581_1268349_-	phosphatase	NA	K4K650	Caulobacter_phage	37.8	9.5e-33
WP_014002670.1|1268350_1269292_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_012387019.1|1270505_1271720_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_041636158.1|1271966_1272146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041636155.1|1272598_1275757_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_014002666.1|1275753_1276206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415022.1|1276202_1276748_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
WP_049784736.1|1276762_1276987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002663.1|1277274_1277538_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_103415021.1|1277596_1277836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002165.1|1277832_1278618_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
WP_014002164.1|1278626_1280150_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
WP_012387019.1|1280644_1281859_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415009.1|1282291_1283485_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_014002574.1|1283499_1283823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415010.1|1283889_1284492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|1284545_1285760_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
1285839:1285898	attL	GGTTCCTCGTCATTTCAAGTGGGTAGCCTGAGATCCAGCTTGCCCAGGATCAGGTAGGCC	NA	NA	NA	NA
WP_012387019.1|1285852_1287067_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014002536.1|1287217_1288435_+|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
WP_064306523.1|1289189_1289915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306524.1|1289916_1290579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081254376.1|1291038_1291596_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_064306457.1|1291697_1295210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002578.1|1295206_1296118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148262191.1|1296114_1296618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049784632.1|1297204_1298941_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_014002580.1|1300214_1301000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002136.1|1301392_1302448_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_081254375.1|1302613_1303525_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041636067.1|1303680_1305375_+	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_041636069.1|1305371_1307777_+	DUF2309 domain-containing protein	NA	NA	NA	NA	NA
WP_014002584.1|1307863_1308910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041636073.1|1308947_1309820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041636817.1|1309906_1311592_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_103415012.1|1312159_1312561_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	37.1	1.1e-16
WP_012387019.1|1312518_1313733_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014002658.1|1314098_1314734_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_014002657.1|1314730_1316887_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	25.3	1.2e-27
WP_014002656.1|1316967_1317315_-	hypothetical protein	NA	A0A2H4PDG5	Mycobacterium_phage	34.8	2.9e-05
WP_041636136.1|1317908_1318865_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	48.4	9.5e-75
WP_149712632.1|1318979_1319543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002653.1|1319751_1320921_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014002652.1|1321212_1322613_+	NarK/NasA family nitrate transporter	NA	NA	NA	NA	NA
WP_149712633.1|1322683_1323238_+	alginate export family protein	NA	NA	NA	NA	NA
WP_012387019.1|1323241_1324456_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014002650.1|1325458_1327906_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
1324411:1325714	attR	GGCCTACCTGATCCTGGGCAAGCTGGATCTCAGGCTACCCACTTGAAATGACGAGGAACCGTTTCCGTTCAGGGGAATCTCAACCATTCCTTGGGTGCCTATGCGGCGTATATCTGGCGTATCAAAAACATTCTCAACGAAAACGTCCCAAACAAGACCTTTTTAGGTGAGGTCCATTGGCAACCTTCTACGCTCTTTCGTGCCCAGGCTTTTGGCTATTGGTACGGAAACCAGGCAAGAAGCAGCATTCCGGGAGCAGCTGCCTGTTTCTTGCCGGGCAATGCCCAGATCTGCAATAGTCAGACCCTCGGTCTTCGCTTTCAGGGTGTAGTACCTGTCGGCTCCGGGGTACAGATCCCGTACGACGTCAGCTATGCTAAACAGCTCCCCTACGATGCCGGCAGCTCCTTGATCAATGCCCAGTACTACCACCTGAGTACCGGGGTGCGCTGGGCCGGTTTTGGGGCAATCGCCAATTACATGGTTATGGGTAGCAATCGCACGGGTAGCTACGGCTTCCAGACACCGCTGGCGTCAAAACACCTGTTCAATGGTTGGGCCGAGGTGTTCCTCACCACACCCCCAAATGGCCTTCGTAGTTTGTATTTCACGCTCGATGGAACGCTGCTGGGCACTGCCTTCCAAGCAACGTATTACGACTTTCGCAGCGCATATCGGGGGGAGAACTACGGGCACGAGGTCGATTTGTCGGCAATCCACCGCTTTTCCGCGCACTGGAGCGCGGGAATTCAATATGCCGATTATCGTCGCAGTCATTATGGGGTAAACACGGAAGGTGCCTGGGTCTTTGTGACCGCGGCGTTCTGACACCTCACCAGCATGGTGCACGTTGCACCATGCTTCGCACCATGACACAGCAAACTGAGATCGGGGATATGCCGCAACCCTTTGTTTGTCGACAATCCCATCTTGGCACATTCATTGCTTTGCTTATGATGAGGCAGTCTCTACGATTGCTCGTGTGAAACGGCAAAGGCGTCGTCAGCATTTACGGCTGGCTACGCCTTTTTTATGGAGAATCAGCAAAATGGCCAAGAAGGCAGCAAGAGCGCGCTTGGTGGTTATCGGCAACGGCATGGCGGGGATCCGAACCATCGAAGAATTGCTGAAGATGGCACCGGACCTGTACGAGATCACCGTCTTTGGCGATGAGCCGCACCCCAACTACAATCGCATTTTGCTCACGCCCGTGCTGGCAGGTGAGATGCGCCTCGAGGAGACCATCCTCAATGATCGCGATTGGTACGCGGAACATGGCATTACTCTGCATGTCCGTAGTCCAG	NA	NA	NA	NA
WP_041636914.1|1327910_1328231_+	nitrite reductase small subunit NirD	NA	NA	NA	NA	NA
WP_014002648.1|1328227_1330990_+	nitrate reductase	NA	NA	NA	NA	NA
WP_081254398.1|1330956_1332003_+	DNA-binding protein YbiB	NA	NA	NA	NA	NA
WP_049784639.1|1332016_1332808_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_081254399.1|1332804_1333164_+	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
WP_014002646.1|1333169_1333739_+	ANTAR domain-containing protein	NA	NA	NA	NA	NA
WP_014002645.1|1333811_1335995_-	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	33.1	1.5e-51
WP_041636129.1|1335991_1336387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002642.1|1336492_1336762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041636126.1|1337106_1337373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002640.1|1337542_1338787_-	potassium channel protein	NA	NA	NA	NA	NA
WP_014002639.1|1338877_1339177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041636118.1|1340255_1342661_-	DEAD/DEAH box helicase family protein	NA	Q8QNK6	Ectocarpus_siliculosus_virus	31.0	1.1e-29
WP_064306439.1|1342641_1343193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002635.1|1343201_1343534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002634.1|1343717_1344722_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	24.8	2.2e-05
WP_041636112.1|1346074_1346359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002632.1|1346944_1347850_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_064306238.1|1347954_1349286_+	outer membrane porin, OprD family	NA	NA	NA	NA	NA
WP_082177451.1|1349645_1349879_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_103415111.1|1349900_1350920_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	1380549	1409701	2726366	integrase,transposase	Lysinibacillus_phage(25.0%)	28	1384808:1384823	1411203:1411218
WP_014002536.1|1380549_1381767_-|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
WP_012387019.1|1381858_1383073_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415015.1|1383164_1383407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306246.1|1383408_1384038_+	thioredoxin fold domain-containing protein	NA	NA	NA	NA	NA
WP_103415014.1|1384039_1385938_+	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
1384808:1384823	attL	ATCGGGATGTCCCTGG	NA	NA	NA	NA
WP_014002604.1|1386176_1386881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002164.1|1387112_1388636_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
WP_014002165.1|1388644_1389430_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
WP_004867952.1|1389685_1389982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004870126.1|1389984_1390365_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
WP_149712634.1|1390373_1391936_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
WP_004870695.1|1391925_1392237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082177288.1|1392168_1392642_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041636087.1|1393094_1393520_+	mercury transporter MerT	NA	NA	NA	NA	NA
WP_014002601.1|1393559_1393904_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_014002600.1|1394025_1395690_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.7	5.8e-43
WP_014002599.1|1395706_1396363_+	organomercurial lyase	NA	NA	NA	NA	NA
WP_041636844.1|1396371_1396830_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014002598.1|1396826_1398929_+	glucan 1,4-alpha-glucosidase	NA	NA	NA	NA	NA
WP_014003050.1|1399976_1400288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002175.1|1400277_1401840_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
WP_004870126.1|1401848_1402229_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
WP_014002174.1|1402231_1402528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|1403172_1404387_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712635.1|1404463_1405696_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.8e-89
WP_041636052.1|1405814_1406036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002572.1|1406095_1408456_+	DotA/TraY family protein	NA	NA	NA	NA	NA
WP_014002571.1|1408690_1409701_-|integrase	site-specific integrase	integrase	W6MYA3	Pseudomonas_phage	41.3	3.8e-66
1411203:1411218	attR	ATCGGGATGTCCCTGG	NA	NA	NA	NA
>prophage 10
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	1627067	1719067	2726366	integrase,tRNA,transposase	Lysinibacillus_phage(43.75%)	74	1639115:1639174	1728297:1728312
WP_014002539.1|1627067_1628024_+|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	49.7	3.9e-76
WP_103414974.1|1630374_1630593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081254312.1|1630636_1631863_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	32.7	3.3e-11
WP_081254314.1|1631878_1633111_-	cellulase	NA	NA	NA	NA	NA
WP_064306263.1|1633172_1636010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103414975.1|1636006_1638070_-	cellulose synthase	NA	NA	NA	NA	NA
WP_103414976.1|1638095_1639058_-	hypothetical protein	NA	NA	NA	NA	NA
1639115:1639174	attL	GGCTCTTCGTCAGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCGGTCGTGCCCTGAA	NA	NA	NA	NA
WP_012387019.1|1639187_1640402_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
1639115:1639174	attL	GGCTCTTCGTCAGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCGGTCGTGCCCTGAA	NA	NA	NA	NA
WP_103415171.1|1640359_1641691_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_103415170.1|1641735_1642719_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.2	2.3e-68
WP_064306250.1|1643446_1643650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012387019.1|1643865_1645080_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014002536.1|1645172_1646390_-|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
WP_149712659.1|1647140_1647686_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_081254389.1|1647999_1648401_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306476.1|1649679_1650354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149712637.1|1650662_1650962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306474.1|1651186_1651642_-	lytic transglycosylase domain-containing protein	NA	A0A1P8CWQ1	Bacillus_phage	43.8	9.9e-14
WP_103415055.1|1652237_1652444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306472.1|1652998_1653355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306471.1|1654140_1655163_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012387019.1|1655546_1656761_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712638.1|1656764_1657220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081254387.1|1657279_1658923_-	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA	NA
1656775:1658076	attR	TTCAGGGCACGACCGCTCCACAGCATTCTACCCCCTACCCACTCAATCTGACGAAGAGCCTTAAAGCATCCATTAAGATCGTCTTGACATTCGTTCAAAAAACGACGGCGGATCTGCGGTCTTGTCCGTATCTCTTGTATATGGCTAGAAACAAATACCGGATCGCTTAATATAAAATCCCAAACGTTTTTAAAGTTTTCAGCGGTTGGTAAATGATCTCTAAGATTTTTTTCTAGCTCCAGCATATCGGACACCACCATCGGCATACACACTTCTTCTGGGATAAGAAAAATACCTCTGCGCCGAAACCATCCACCGTCAAGGCTGGTCCAGCGCGCTAGCCATACAGCAAGCGATATACCGCCGATCACCGGGAAATACCAGAACAACAGGTCGGCTGGATGAACCCACCCGTGAGATGCAGTTAGCAATATCTCTTTAGTCAAGGAAGAAACATCTTGCGTATAATTTATCAATAGCCCCCAAAGTACCATACCAAATAAACTTACCTTACCAAAATACTCCCAGGATTCCGATAAAGAGAGTTCCGTATCCCCCGGTTCTGGGTTCCCCAGGTAACGTTAGTACGGCGTATCCATTGCCAAAAGAACAGAGTAATAAAAACCATCATCACTGGTGACCAAAAGAAACTGAAAACAGTCTCCATGGCTACAGAATAAAGAAGCTTGCCTTTTCCTCCGTACTGCGCCACTCTCTGGCTCGGCAGGTTGGCTAAAACGGCCAGGATGCGAGGCAGAAACAGAAACACCATGGAGGAGGCGAGCAGGGTGATCGCGGGCACTCGGAATTGCCCCAGTCCCGAGATGTTCAGGGTGGCATGTTGCAGAAAGTGGATAACTGAGTATCCGGATATCAGCAAAAACGCGAACCAGAGCGGCGCTGAAAAATACGCCATTACGCCTTGTATAAGAGTCTCCTGATGCAGCGATTTCAGTCCCTTTAGAAACCAGAATCGAATATGCTGTAGATTGCCGATCATCCAGCGCCGCTCTCGCACCAGAAAACCAACCATATTGGATGGAATCTCCTCGAAACTTCCCAGAATTTCTGGTAGAAACCATACTTCATAACCAGCACGTCCTAGAGCGGCTGCTTCGATAATGTCATGCGACAAAGGCTTTCCACCCCATGGTTTCTTGCCCTCCAGTTTTGGCAGAATGGCACTGCGCACGAATGGTTCAGAGCGAATCATTGCGTTGTGCCCAATATAAATGGCATGGCCCAGATTCATGGCCTGCATGCTATAGGTGAACACGCTGCCATAGAGGTGGGCCGAGAATT	NA	NA	NA	NA
WP_149712639.1|1658909_1659653_-	hypothetical protein	NA	NA	NA	NA	NA
1656775:1658076	attR	TTCAGGGCACGACCGCTCCACAGCATTCTACCCCCTACCCACTCAATCTGACGAAGAGCCTTAAAGCATCCATTAAGATCGTCTTGACATTCGTTCAAAAAACGACGGCGGATCTGCGGTCTTGTCCGTATCTCTTGTATATGGCTAGAAACAAATACCGGATCGCTTAATATAAAATCCCAAACGTTTTTAAAGTTTTCAGCGGTTGGTAAATGATCTCTAAGATTTTTTTCTAGCTCCAGCATATCGGACACCACCATCGGCATACACACTTCTTCTGGGATAAGAAAAATACCTCTGCGCCGAAACCATCCACCGTCAAGGCTGGTCCAGCGCGCTAGCCATACAGCAAGCGATATACCGCCGATCACCGGGAAATACCAGAACAACAGGTCGGCTGGATGAACCCACCCGTGAGATGCAGTTAGCAATATCTCTTTAGTCAAGGAAGAAACATCTTGCGTATAATTTATCAATAGCCCCCAAAGTACCATACCAAATAAACTTACCTTACCAAAATACTCCCAGGATTCCGATAAAGAGAGTTCCGTATCCCCCGGTTCTGGGTTCCCCAGGTAACGTTAGTACGGCGTATCCATTGCCAAAAGAACAGAGTAATAAAAACCATCATCACTGGTGACCAAAAGAAACTGAAAACAGTCTCCATGGCTACAGAATAAAGAAGCTTGCCTTTTCCTCCGTACTGCGCCACTCTCTGGCTCGGCAGGTTGGCTAAAACGGCCAGGATGCGAGGCAGAAACAGAAACACCATGGAGGAGGCGAGCAGGGTGATCGCGGGCACTCGGAATTGCCCCAGTCCCGAGATGTTCAGGGTGGCATGTTGCAGAAAGTGGATAACTGAGTATCCGGATATCAGCAAAAACGCGAACCAGAGCGGCGCTGAAAAATACGCCATTACGCCTTGTATAAGAGTCTCCTGATGCAGCGATTTCAGTCCCTTTAGAAACCAGAATCGAATATGCTGTAGATTGCCGATCATCCAGCGCCGCTCTCGCACCAGAAAACCAACCATATTGGATGGAATCTCCTCGAAACTTCCCAGAATTTCTGGTAGAAACCATACTTCATAACCAGCACGTCCTAGAGCGGCTGCTTCGATAATGTCATGCGACAAAGGCTTTCCACCCCATGGTTTCTTGCCCTCCAGTTTTGGCAGAATGGCACTGCGCACGAATGGTTCAGAGCGAATCATTGCGTTGTGCCCAATATAAATGGCATGGCCCAGATTCATGGCCTGCATGCTATAGGTGAACACGCTGCCATAGAGGTGGGCCGAGAATT	NA	NA	NA	NA
WP_149712640.1|1660894_1661383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149712641.1|1661379_1661883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149712642.1|1663979_1664327_+	EexN family lipoprotein	NA	NA	NA	NA	NA
WP_149712643.1|1665195_1666251_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_064306540.1|1666484_1666736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306541.1|1666940_1667282_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_064306542.1|1667593_1667998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306543.1|1668167_1668518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306544.1|1668908_1669313_+	Fe-S cluster assembly scaffold IscU	NA	A0A2H4N7M4	Lake_Baikal_phage	74.8	4.0e-51
WP_012387019.1|1669701_1670916_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415001.1|1671166_1671619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149712644.1|1671652_1672120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306497.1|1675651_1676569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064306498.1|1676724_1677009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306499.1|1677008_1678262_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_014002140.1|1678417_1679317_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_103414998.1|1679322_1680264_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_012387019.1|1681949_1683164_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712645.1|1683250_1685116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002536.1|1685201_1686419_-|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
WP_103414997.1|1686595_1688035_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_004871000.1|1688289_1689696_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_064306285.1|1689696_1691151_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_064306284.1|1691153_1692170_-	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_004870997.1|1692170_1692620_-	protein-export chaperone SecB	NA	NA	NA	NA	NA
WP_064306283.1|1692889_1693240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004870995.1|1693239_1694094_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A075BTY6	Microcystis_phage	44.0	1.4e-05
WP_014002445.1|1694128_1694956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306282.1|1694964_1696800_+	DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	34.3	3.1e-74
WP_004870992.1|1696839_1697157_+	iron donor protein CyaY	NA	NA	NA	NA	NA
WP_064306281.1|1697160_1697619_+	EVE domain-containing protein	NA	NA	NA	NA	NA
WP_004870990.1|1697611_1698304_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_064306280.1|1698341_1698686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002443.1|1698723_1700700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004870987.1|1700862_1701936_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_014002442.1|1701932_1703051_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_004870982.1|1703175_1704678_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.6	1.8e-48
WP_004870981.1|1704688_1705120_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_004870978.1|1705132_1706020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064306330.1|1706016_1708833_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	36.9	1.1e-147
WP_077272830.1|1708944_1709781_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_064306328.1|1709850_1711452_-	APC family permease	NA	NA	NA	NA	NA
WP_014002436.1|1711564_1712044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002435.1|1712316_1713759_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004870964.1|1713813_1714902_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_103414996.1|1714981_1715761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014002433.1|1715757_1716669_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_004870956.1|1716674_1717214_-	universal stress protein	NA	NA	NA	NA	NA
WP_004870950.1|1717348_1719067_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
1728297:1728312	attR	TGAGCGACTGCTCGAG	NA	NA	NA	NA
>prophage 11
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	1837423	1849961	2726366		Staphylococcus_phage(37.5%)	13	NA	NA
WP_014002389.1|1837423_1839109_+	2-polyprenylphenol 6-hydroxylase	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	27.9	3.8e-34
WP_004867332.1|1839123_1839456_+	LapA family protein	NA	NA	NA	NA	NA
WP_103415105.1|1839476_1840040_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_004870722.1|1840148_1840592_-	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_004870721.1|1840616_1841084_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.6	1.2e-33
WP_004870720.1|1841076_1842210_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	35.7	1.9e-53
WP_038471582.1|1842206_1842863_-	riboflavin synthase	NA	A0A1V0SE20	Indivirus	34.6	3.1e-16
WP_014002387.1|1842835_1843945_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.6	5.5e-42
WP_004870717.1|1843955_1844477_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_014002386.1|1844449_1845694_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.2	3.7e-95
WP_004870714.1|1846736_1847291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004870713.1|1847399_1848269_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	42.4	5.0e-14
WP_014002384.1|1848455_1849961_+	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	23.1	4.0e-11
>prophage 12
NZ_CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2726366	1906214	1952160	2726366	integrase,transposase	Lysinibacillus_phage(36.36%)	41	1937450:1937464	1952549:1952563
WP_014002164.1|1906214_1907738_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
WP_014002165.1|1907746_1908532_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
WP_014003128.1|1908891_1910274_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_014003129.1|1910312_1911878_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	24.9	1.2e-10
WP_012387019.1|1912311_1913526_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_149712648.1|1913489_1914170_+	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA	NA
WP_038472026.1|1915482_1915671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103415071.1|1915754_1916258_-	type 1 glutamine amidotransferase	NA	NA	NA	NA	NA
WP_012387019.1|1916372_1917587_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_012387019.1|1918315_1919530_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_004873091.1|1920665_1921436_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_014003134.1|1921432_1922248_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_004873095.1|1922249_1923002_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_004873098.1|1923053_1923458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003135.1|1923508_1924540_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_049784751.1|1924566_1925463_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_004873103.1|1925592_1926318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004873104.1|1926330_1927449_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_014003137.1|1927430_1928795_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_004873108.1|1928834_1929665_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_081254332.1|1929691_1931755_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_004873111.1|1931760_1931979_-	DUF1858 domain-containing protein	NA	NA	NA	NA	NA
WP_004873114.1|1931975_1932368_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_004873115.1|1932441_1934643_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A142EZT7	Stenotrophomonas_phage	38.3	8.0e-08
WP_004873116.1|1934689_1934965_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_004873117.1|1934992_1935622_-	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	34.1	2.4e-18
WP_004873118.1|1935679_1936543_-	YicC family protein	NA	NA	NA	NA	NA
WP_004873119.1|1936780_1939582_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA	NA
1937450:1937464	attL	GCCGCGCTGGAACAG	NA	NA	NA	NA
WP_004873120.1|1939585_1940509_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_077272734.1|1940510_1940714_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_014003138.1|1940815_1942657_-	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_004873122.1|1942750_1943074_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
WP_014003139.1|1943066_1944227_-	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA	NA
WP_004873124.1|1944402_1944690_-	iron oxidase	NA	NA	NA	NA	NA
WP_004873125.1|1944828_1945293_-	group 1 truncated hemoglobin	NA	NA	NA	NA	NA
WP_004873126.1|1945340_1946438_-	DUF3034 family protein	NA	NA	NA	NA	NA
WP_038472186.1|1948287_1948665_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	35.1	1.7e-06
WP_149712649.1|1948675_1948969_+	DUF190 domain-containing protein	NA	NA	NA	NA	NA
WP_014002536.1|1948926_1950144_+|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
WP_149712650.1|1950140_1950305_+	DUF190 domain-containing protein	NA	NA	NA	NA	NA
WP_014003141.1|1950951_1952160_+|integrase	site-specific integrase	integrase	A0A0M4R586	Salmonella_phage	28.8	1.5e-16
1952549:1952563	attR	CTGTTCCAGCGCGGC	NA	NA	NA	NA
>prophage 1
NZ_CP026329	Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence	190798	16	73188	190798	protease,transposase,integrase	Lysinibacillus_phage(17.39%)	59	21038:21097	71958:73262
WP_014003859.1|16_1369_+|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_049784763.1|1793_2501_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_041638069.1|2516_2915_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_041638154.1|2953_3718_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_081254374.1|3742_5125_+	allantoin permease	NA	NA	NA	NA	NA
WP_014003634.1|5121_6363_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_103415147.1|6371_7325_+	adenosine deaminase	NA	NA	NA	NA	NA
WP_012387019.1|7372_8587_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415148.1|8588_9605_+	phosphorylase	NA	NA	NA	NA	NA
WP_149712660.1|14279_15191_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.5	2.7e-50
WP_149712661.1|15340_16315_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_103415151.1|17592_17787_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_004868469.1|17859_19122_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.4e-89
WP_103415152.1|19998_21096_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
21038:21097	attL	ATGGTTCCTCGTCATTTCAAGTGGGTAGCCTGAGATCCAGCTTGCCCAGGATCAGGTAGG	NA	NA	NA	NA
WP_012387019.1|21053_22268_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_014003648.1|23701_24685_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_014003649.1|25131_27378_+	xanthine dehydrogenase family protein	NA	A0A0P0I429	Acinetobacter_phage	29.0	2.2e-69
WP_041638072.1|27377_27833_+	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	31.9	7.6e-14
WP_014003651.1|27829_28681_+	xanthine dehydrogenase family protein subunit M	NA	A0A0P0IVM8	Acinetobacter_phage	28.2	3.9e-19
WP_012387019.1|28840_30055_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
WP_103415153.1|30090_30588_+	ureidoglycolate hydrolase	NA	NA	NA	NA	NA
WP_014003653.1|30597_31680_+	ring-opening amidohydrolase	NA	NA	NA	NA	NA
WP_014003654.1|31679_32639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041638073.1|32613_32811_+	DUF4089 domain-containing protein	NA	NA	NA	NA	NA
WP_041638170.1|32832_34206_+	AtzE family amidohydrolase	NA	NA	NA	NA	NA
WP_014003657.1|34217_34604_+	oxalurate catabolism protein HpxZ	NA	NA	NA	NA	NA
WP_081254407.1|34607_35219_+	NTP transferase domain-containing protein	NA	NA	NA	NA	NA
WP_041638074.1|35215_36832_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_014003659.1|36823_37744_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_103415154.1|38323_39610_+|transposase	IS5 family transposase	transposase	Q38213	Escherichia_phage	29.7	2.9e-10
WP_148262248.1|40198_40333_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_103415155.1|40478_40982_-|protease	SOS-response repressor and protease LexA	protease	A0A218MND2	uncultured_virus	39.5	4.0e-16
WP_148262249.1|40966_41272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003662.1|41240_41612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003663.1|41798_42731_+|integrase	tyrosine-type recombinase/integrase	integrase	A7XX23	Thermus_virus	28.9	7.7e-13
WP_041638124.1|43323_43599_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.5e-14
WP_041638124.1|43870_44146_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.5e-14
WP_014003665.1|44157_44520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003666.1|44610_44922_+	integration host factor subunit alpha	NA	G8GWC6	Rhodobacter_phage	33.3	2.0e-05
WP_014003667.1|45150_45441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003668.1|45437_45722_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA	NA
WP_103415156.1|45998_46595_-	uracil-DNA glycosylase	NA	A0A218MKQ4	uncultured_virus	40.6	1.0e-10
WP_014003670.1|46591_46825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003673.1|47612_47945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415157.1|47996_49043_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.9	3.2e-39
WP_103415158.1|49577_49772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003677.1|51401_53441_+	ATP-dependent helicase	NA	S5MMD7	Bacillus_phage	23.8	1.5e-29
WP_041638076.1|54340_55483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103415180.1|55494_57714_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_014003681.1|57774_58086_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_103415159.1|58129_58546_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_081254397.1|63104_64559_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_014003642.1|64940_65696_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	54.6	1.5e-67
WP_049784783.1|65707_67222_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	49.0	3.2e-133
WP_103415160.1|67347_68853_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	25.5	2.0e-18
WP_103415161.1|68842_69574_+	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	41.1	2.7e-37
WP_149712662.1|70251_71046_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	48.8	4.5e-38
WP_149712663.1|71058_71886_+	type I restriction enzyme HsdR N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012387019.1|71973_73188_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
71958:73262	attR	ATGGTTCCTCGTCATTTCAAGTGGGTAGCCTGAGATCCAGCTTGCCCAGGATCAGGTAGGCCATGTTGATAAAGTTCTTGTGCGTGCGGTAACCCCGAGCCTTGGCCTTGGCGGATTGAATGAGGCTGTTGAAACCTTCCAGAATTCCATTGGTGATCTGGCTCTCGAACCATCGGAGCACGCCATCCCAGTGATTCATGATGGTGTAGGCGACCCTGACGATAGGCGGCAGATCGCTGGTTCTGGCGTTTTCCAACCAGGCTTTCAAGAGGGTAGCCCCCTGGTGGCGATTCTTGATCGTGAAGATGTCCTGAAAGGTCAGGCGGAACTGGTAGGCCTGCGCCGTCTTGAGGTTCTGGTCTTTGAGCAATTCCTGCAGCTTTTCTTTCTGCTTCATTTTGAGGTTGCAATCGTTCTTGAGCCAAAGCCAGCGGGTCTTTTTGAGATTTGGCTGGGTGAGGACTTCCCCCTTGCGCACGTCGTCTACGGCCTCGTTGACGAGCTTCATGAGGTGAAAACGATCGAAAGTGATCTCCGCATTGGGCAGGTGCTCGGCAGCCCCTTTCTGGAAGGCCGGCGAGAGGTCCATGCTCACATCGGTGATCGCTTCCGCGCTACCACCATGGGCCTGTAGATCTGCGGAGAATTTCTCAAAGGTCTTGGCATCCTTGCCGGGAGTAGCGAACAAGAGTCGCCGGGCATTCAGATCCACGAAGAGCGTGATGTAGTCATGTCCATGCCGACTGCTGGTTTCATCGACGCCGACGGCATGGACATTGGCCATATCCACCGCAGCACGAGCTTCGGGCACATAATGGTCAATCACTCGCCACAGGAGCTTGTCGGTCTCACCGACCATGCGAGCTGCCGTCAATACCGGCATCTCCCGCACCAGGGTCATGATCAGCGCTTCAAAGAGCAGGGTGAAACGCGAGCCTTCCCGCGCCCAGGGAACAGATATCTGATGCACTCCATGCTCCTGGCACTTCACACGAGGTACACGGGCATGGAGATAGGCTTCATGCTGGAAGAAATCCATGTGCCGCCAGGTATGGTCACGGGTATCATGTACCGGACACTCCTCACCACAGACGGAGCAAGCAAAGCGACTACCTTTGGGAAAGTTGATGTGCAGATCCAGGCGTTTCTCCTCCACCGTGAAAGTCACATGATCCACCAACCACGGCGGAACCAATCCTAACGCGAGAGAAAACAGCTCTTCAGGGACCATCAGCTAACTCCTATTCAGGGCACGACCGCTCCACAGCATTCTACCCCCTACCCACTCAATCTGACGAAGAGCCA	NA	NA	NA	NA
>prophage 2
NZ_CP026329	Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence	190798	106031	171112	190798	protease,transposase,integrase	uncultured_Mediterranean_phage(16.67%)	44	99113:99129	112041:112057
99113:99129	attL	GATCGTGTCCAGGATCC	NA	NA	NA	NA
WP_014003781.1|106031_106955_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2K9VH72	Gordonia_phage	28.0	4.2e-11
WP_041638116.1|106980_107304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415184.1|108110_109631_-|transposase	transposase	transposase	A0A0H3UZK2	Geobacillus_virus	32.4	3.0e-62
WP_049784773.1|109792_110092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003806.1|111191_111590_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_014003805.1|111659_112415_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
112041:112057	attR	GATCGTGTCCAGGATCC	NA	NA	NA	NA
WP_064306286.1|113017_113557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014002165.1|114108_114894_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	35.0	1.5e-30
WP_014002164.1|114902_116426_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	33.5	1.8e-46
WP_103415167.1|117076_122371_+	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	22.7	2.9e-56
WP_103415168.1|122367_125145_+	DEAD/DEAH box helicase	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	27.1	1.7e-39
WP_009566302.1|125184_125406_+	prevent-host-death protein	NA	NA	NA	NA	NA
WP_014003786.1|125405_125819_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_103415169.1|125815_129769_+	N-6 DNA methylase	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	24.0	1.2e-43
WP_014003789.1|129920_130703_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_148262258.1|130782_131202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003790.1|131643_131892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003791.1|131901_133665_-	DUF4942 domain-containing protein	NA	I1ZBH6	Salisaeta_icosahedral_phage	29.7	1.1e-07
WP_014003792.1|133668_133956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081254383.1|134024_134309_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041638124.1|134497_134773_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.5e-14
WP_041638125.1|135404_135731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003795.1|135721_136069_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	50.5	1.4e-20
WP_041638125.1|137717_138044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003795.1|138034_138382_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	50.5	1.4e-20
WP_014003798.1|139592_140252_-	reverse transcriptase/maturase	NA	NA	NA	NA	NA
WP_014003799.1|140313_141102_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	47.8	1.6e-59
WP_014003800.1|141101_142343_-|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	31.4	2.1e-34
WP_014003801.1|142394_143003_-	elongation factor GreAB	NA	A0A0U4J920	Pseudomonas_phage	43.5	3.2e-23
WP_064306250.1|147806_148010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415170.1|148737_149721_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.2	2.3e-68
WP_103415171.1|149765_151097_+	glycosyltransferase	NA	M1HJ48	Acanthocystis_turfacea_Chlorella_virus	28.4	6.9e-23
WP_103415172.1|151054_151507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149712642.1|160825_161173_-	EexN family lipoprotein	NA	NA	NA	NA	NA
WP_149712641.1|163269_163773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149712640.1|163769_164258_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004867679.1|165802_166084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003839.1|166096_167236_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2I7SAX5	Vibrio_phage	33.0	2.1e-20
WP_040131400.1|167412_167685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003840.1|167791_168208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014003841.1|168669_168957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041638147.1|169009_169234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014003843.1|169549_169807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103415111.1|170092_171112_+|transposase	IS5 family transposase	transposase	Q38213	Escherichia_phage	28.2	1.6e-19
