assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001652665.1_ASM165266v1	NZ_CP015343	Legionella pneumophila strain D-7631, complete genome	1	2362578-2362668	1	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,DinG,RT,WYL	Unclear	GGCTCTTCCCCAAATCCGGGGGCA	24	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,DEDDh,DinG,RT,WYL	NA|174aa|up_7|NZ_CP015343.1_2356575_2357097_-,NA|76aa|up_5|NZ_CP015343.1_2358433_2358661_-,NA|67aa|up_2|NZ_CP015343.1_2360499_2360700_+,NA|128aa|up_1|NZ_CP015343.1_2360793_2361177_+,NA|193aa|down_2|NZ_CP015343.1_2365173_2365752_+,NA|189aa|down_3|NZ_CP015343.1_2365856_2366423_+	NA|285aa|up_9|NZ_CP015343.1_2355223_2356078_-	pfam05114, DUF692, Protein of unknown function (DUF692)	NA|98aa|up_8|NZ_CP015343.1_2356092_2356386_-	pfam10048, DUF2282, Predicted integral membrane protein (DUF2282)	NA|174aa|up_7|NZ_CP015343.1_2356575_2357097_-	NA	NA|163aa|up_6|NZ_CP015343.1_2357401_2357890_-	COG3350, COG3350, Uncharacterized conserved protein [Function unknown]	NA|76aa|up_5|NZ_CP015343.1_2358433_2358661_-	NA	NA|174aa|up_4|NZ_CP015343.1_2358818_2359340_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|185aa|up_3|NZ_CP015343.1_2359511_2360066_+	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme	NA|67aa|up_2|NZ_CP015343.1_2360499_2360700_+	NA	NA|128aa|up_1|NZ_CP015343.1_2360793_2361177_+	NA	NA|318aa|up_0|NZ_CP015343.1_2361230_2362184_-	pfam07751, Abi_2, Abi-like protein	NA|392aa|down_0|NZ_CP015343.1_2362674_2363850_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|377aa|down_1|NZ_CP015343.1_2363888_2365019_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|193aa|down_2|NZ_CP015343.1_2365173_2365752_+	NA	NA|189aa|down_3|NZ_CP015343.1_2365856_2366423_+	NA	NA|85aa|down_4|NZ_CP015343.1_2366770_2367025_+	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|99aa|down_5|NZ_CP015343.1_2367014_2367311_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|70aa|down_6|NZ_CP015343.1_2369048_2369258_+	COG1278, CspC, Cold shock proteins [Transcription]	cas3|469aa|down_7|NZ_CP015343.1_2369497_2370904_+	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional	NA|304aa|down_8|NZ_CP015343.1_2371060_2371972_+	COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|173aa|down_9|NZ_CP015343.1_2372063_2372582_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters
GCF_001652665.1_ASM165266v1	NZ_CP015343	Legionella pneumophila strain D-7631, complete genome	2	2680964-2681057	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TTCGGCTCTTCCCCAAATCCGGGGGCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,RT,WYL	NA,NA|238aa|down_0|NZ_CP015343.1_2683310_2684024_+,NA|139aa|down_2|NZ_CP015343.1_2685214_2685631_-,NA|246aa|down_4|NZ_CP015343.1_2687247_2687985_-,NA|117aa|down_5|NZ_CP015343.1_2688165_2688516_+,NA|118aa|down_6|NZ_CP015343.1_2688491_2688845_+,NA|85aa|down_7|NZ_CP015343.1_2689040_2689295_-,NA|267aa|down_8|NZ_CP015343.1_2689516_2690317_-,NA|233aa|down_9|NZ_CP015343.1_2690971_2691670_+	NA|188aa|up_9|NZ_CP015343.1_2668903_2669467_-	PRK11762, nudE, adenosine nucleotide hydrolase NudE; Provisional	NA|376aa|up_8|NZ_CP015343.1_2669545_2670673_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|470aa|up_7|NZ_CP015343.1_2670704_2672114_-	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|278aa|up_6|NZ_CP015343.1_2672467_2673301_+	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY	NA|334aa|up_5|NZ_CP015343.1_2673477_2674479_-	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|80aa|up_4|NZ_CP015343.1_2674683_2674923_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|148aa|up_3|NZ_CP015343.1_2675125_2675569_+	pfam09424, YqeY, Yqey-like protein	NA|585aa|up_2|NZ_CP015343.1_2675565_2677320_+	PRK05667, dnaG, DNA primase; Validated	NA|374aa|up_1|NZ_CP015343.1_2677304_2678426_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|624aa|up_0|NZ_CP015343.1_2678627_2680499_+	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|238aa|down_0|NZ_CP015343.1_2683310_2684024_+	NA	NA|287aa|down_1|NZ_CP015343.1_2684080_2684941_+	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|139aa|down_2|NZ_CP015343.1_2685214_2685631_-	NA	NA|422aa|down_3|NZ_CP015343.1_2685782_2687048_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|246aa|down_4|NZ_CP015343.1_2687247_2687985_-	NA	NA|117aa|down_5|NZ_CP015343.1_2688165_2688516_+	NA	NA|118aa|down_6|NZ_CP015343.1_2688491_2688845_+	NA	NA|85aa|down_7|NZ_CP015343.1_2689040_2689295_-	NA	NA|267aa|down_8|NZ_CP015343.1_2689516_2690317_-	NA	NA|233aa|down_9|NZ_CP015343.1_2690971_2691670_+	NA
GCF_001652665.1_ASM165266v1	NZ_CP015343	Legionella pneumophila strain D-7631, complete genome	3	2714488-2714654	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	AAATTTACCGCGATAACAGTAATTT	25	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,RT,WYL	NA|449aa|up_5|NZ_CP015343.1_2708491_2709838_+,NA|66aa|up_3|NZ_CP015343.1_2710585_2710783_-,NA|158aa|up_1|NZ_CP015343.1_2712663_2713137_+,NA|300aa|down_7|NZ_CP015343.1_2722481_2723381_-,NA|480aa|down_8|NZ_CP015343.1_2723542_2724982_+	NA|403aa|up_9|NZ_CP015343.1_2703107_2704316_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|87aa|up_8|NZ_CP015343.1_2704348_2704609_-	cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox)	NA|523aa|up_7|NZ_CP015343.1_2704857_2706426_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|212aa|up_6|NZ_CP015343.1_2707687_2708323_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|449aa|up_5|NZ_CP015343.1_2708491_2709838_+	NA	NA|236aa|up_4|NZ_CP015343.1_2709827_2710535_-	cd19916, OphMA_like, tetrapyrrole methylase family protein similar to Omphalotus olearius omphalotin methyltransferase (OphMA) and Dendrothele bispora dbOphMA	NA|66aa|up_3|NZ_CP015343.1_2710585_2710783_-	NA	NA|409aa|up_2|NZ_CP015343.1_2710802_2712029_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|158aa|up_1|NZ_CP015343.1_2712663_2713137_+	NA	NA|306aa|up_0|NZ_CP015343.1_2713315_2714233_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|76aa|down_0|NZ_CP015343.1_2714675_2714903_+	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|103aa|down_1|NZ_CP015343.1_2714899_2715208_+	TIGR03071, couple_hipA, HipA N-terminal domain	NA|311aa|down_2|NZ_CP015343.1_2715204_2716137_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|856aa|down_3|NZ_CP015343.1_2716265_2718833_+	cd02077, P-type_ATPase_Mg, magnesium transporting ATPase (MgtA), similar to Escherichia coli MgtA and Salmonella typhimurium MgtA	NA|315aa|down_4|NZ_CP015343.1_2718867_2719812_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|594aa|down_5|NZ_CP015343.1_2720076_2721858_+	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|98aa|down_6|NZ_CP015343.1_2722160_2722454_-	cd15841, SNARE_Qc, SNARE motif, subgroup Qc	NA|300aa|down_7|NZ_CP015343.1_2722481_2723381_-	NA	NA|480aa|down_8|NZ_CP015343.1_2723542_2724982_+	NA	NA|303aa|down_9|NZ_CP015343.1_2725227_2726136_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
