assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001660485.1_ASM166048v1	NZ_CP013979	Agromyces aureus strain AR33 chromosome, complete genome	1	1886823-1886993	1	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal	Orphan	CCGTCGGAGAGCGTCTGCGCGCCG	24	1	1	1886952-1886969	NZ_CP013979.1_4059061-4059078	NA	3	3	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal	NA,NA|256aa|down_4|NZ_CP013979.1_1893910_1894678_+	NA|157aa|up_9|NZ_CP013979.1_1875326_1875797_+	PRK03624, PRK03624, putative acetyltransferase; Provisional	NA|257aa|up_8|NZ_CP013979.1_1875806_1876577_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|350aa|up_7|NZ_CP013979.1_1876655_1877705_-	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|323aa|up_6|NZ_CP013979.1_1877762_1878731_+	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|505aa|up_5|NZ_CP013979.1_1878825_1880340_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|252aa|up_4|NZ_CP013979.1_1880455_1881211_-	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|99aa|up_3|NZ_CP013979.1_1881595_1881892_+	pfam10041, DUF2277, Uncharacterized conserved protein (DUF2277)	NA|816aa|up_2|NZ_CP013979.1_1882068_1884516_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|213aa|up_1|NZ_CP013979.1_1884586_1885225_-	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain	NA|302aa|up_0|NZ_CP013979.1_1885288_1886194_+	PRK11914, PRK11914, diacylglycerol kinase; Reviewed	NA|341aa|down_0|NZ_CP013979.1_1888913_1889936_+	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|264aa|down_1|NZ_CP013979.1_1890131_1890923_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|423aa|down_2|NZ_CP013979.1_1890903_1892172_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|584aa|down_3|NZ_CP013979.1_1892171_1893923_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|256aa|down_4|NZ_CP013979.1_1893910_1894678_+	NA	NA|1781aa|down_5|NZ_CP013979.1_1894857_1900200_+	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin	NA|323aa|down_6|NZ_CP013979.1_1900254_1901223_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|433aa|down_7|NZ_CP013979.1_1901219_1902518_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|764aa|down_8|NZ_CP013979.1_1902514_1904806_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|197aa|down_9|NZ_CP013979.1_1904815_1905406_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins
GCF_001660485.1_ASM166048v1	NZ_CP013979	Agromyces aureus strain AR33 chromosome, complete genome	2	2762897-2763758	1	CRT	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal	Orphan	CATCNCGGTCACCGTANGAACG	22	0	0	NA	NA	NA	10	10	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal	NA|55aa|up_2|NZ_CP013979.1_2760638_2760803_-,NA|269aa|up_0|NZ_CP013979.1_2761883_2762690_-,NA	NA|296aa|up_9|NZ_CP013979.1_2752838_2753726_-	pfam13614, AAA_31, AAA domain	NA|302aa|up_8|NZ_CP013979.1_2753781_2754687_-	PRK00283, xerD, tyrosine recombinase	NA|232aa|up_7|NZ_CP013979.1_2754697_2755393_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|553aa|up_6|NZ_CP013979.1_2755385_2757044_-	PRK05380, pyrG, CTP synthetase; Validated	NA|569aa|up_5|NZ_CP013979.1_2757215_2758922_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|319aa|up_4|NZ_CP013979.1_2758914_2759871_-	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|270aa|up_3|NZ_CP013979.1_2759825_2760635_-	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|55aa|up_2|NZ_CP013979.1_2760638_2760803_-	NA	NA|344aa|up_1|NZ_CP013979.1_2760848_2761880_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|269aa|up_0|NZ_CP013979.1_2761883_2762690_-	NA	NA|434aa|down_0|NZ_CP013979.1_2770355_2771657_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|241aa|down_1|NZ_CP013979.1_2771797_2772520_+	COG3720, HemS, Putative heme degradation protein [Inorganic ion transport and metabolism]	NA|223aa|down_2|NZ_CP013979.1_2773229_2773898_-	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)	NA|484aa|down_3|NZ_CP013979.1_2773935_2775387_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|333aa|down_4|NZ_CP013979.1_2775383_2776382_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|408aa|down_5|NZ_CP013979.1_2776441_2777665_-	PRK03244, argD, acetylornithine transaminase	NA|304aa|down_6|NZ_CP013979.1_2777661_2778573_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|384aa|down_7|NZ_CP013979.1_2778575_2779727_-	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|348aa|down_8|NZ_CP013979.1_2779723_2780767_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|606aa|down_9|NZ_CP013979.1_2781012_2782830_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
GCF_001660485.1_ASM166048v1	NZ_CP013979	Agromyces aureus strain AR33 chromosome, complete genome	3	3244017-3244100	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal	Orphan	GACGCTGCGCTCCTCGACCGGCGGGTCGG	29	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal	NA,NA|118aa|down_6|NZ_CP013979.1_3250960_3251314_+,NA|117aa|down_9|NZ_CP013979.1_3253656_3254007_-	NA|254aa|up_9|NZ_CP013979.1_3221098_3221860_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|3229aa|up_8|NZ_CP013979.1_3222029_3231716_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|1437aa|up_7|NZ_CP013979.1_3232129_3236440_-	PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional	NA|446aa|up_6|NZ_CP013979.1_3236677_3238015_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|276aa|up_5|NZ_CP013979.1_3238037_3238865_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|337aa|up_4|NZ_CP013979.1_3238934_3239945_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|193aa|up_3|NZ_CP013979.1_3239959_3240538_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|236aa|up_2|NZ_CP013979.1_3240588_3241296_+	cd04305, HAD_Neu5Ac-Pase_like, human N-acetylneuraminate-9-phosphate phosphatase, Escherichia coli house-cleaning phosphatase YjjG, and related phosphatases	NA|505aa|up_1|NZ_CP013979.1_3241457_3242972_-	PRK00047, glpK, glycerol kinase GlpK	NA|250aa|up_0|NZ_CP013979.1_3243135_3243885_-	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|601aa|down_0|NZ_CP013979.1_3244116_3245919_-	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|331aa|down_1|NZ_CP013979.1_3246050_3247043_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|350aa|down_2|NZ_CP013979.1_3247374_3248424_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|235aa|down_3|NZ_CP013979.1_3248425_3249130_+	PRK09289, PRK09289, riboflavin synthase	NA|435aa|down_4|NZ_CP013979.1_3249126_3250431_+	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|157aa|down_5|NZ_CP013979.1_3250427_3250898_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|118aa|down_6|NZ_CP013979.1_3250960_3251314_+	NA	NA|456aa|down_7|NZ_CP013979.1_3251568_3252936_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|138aa|down_8|NZ_CP013979.1_3253186_3253600_+	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria	NA|117aa|down_9|NZ_CP013979.1_3253656_3254007_-	NA
GCF_001660485.1_ASM166048v1	NZ_CP013979	Agromyces aureus strain AR33 chromosome, complete genome	4	4368098-4368183	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,Cas9_archaeal	Orphan	GTTCGCTCGGGGACGTCGACTGGCGGGCTTC	31	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,Cas9_archaeal	NA|812aa|up_7|NZ_CP013979.1_4355416_4357852_+,NA	NA|124aa|up_9|NZ_CP013979.1_4353273_4353645_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|477aa|up_8|NZ_CP013979.1_4353837_4355268_-	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|812aa|up_7|NZ_CP013979.1_4355416_4357852_+	NA	NA|539aa|up_6|NZ_CP013979.1_4357844_4359461_+	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|336aa|up_5|NZ_CP013979.1_4359656_4360664_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|108aa|up_4|NZ_CP013979.1_4360718_4361042_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|441aa|up_3|NZ_CP013979.1_4361263_4362586_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|326aa|up_2|NZ_CP013979.1_4362603_4363581_+	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|331aa|up_1|NZ_CP013979.1_4363732_4364725_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|346aa|up_0|NZ_CP013979.1_4364724_4365762_-	pfam13614, AAA_31, AAA domain	NA|223aa|down_0|NZ_CP013979.1_4369485_4370154_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|167aa|down_1|NZ_CP013979.1_4370170_4370671_-	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|318aa|down_2|NZ_CP013979.1_4370673_4371627_-	PRK01315, PRK01315, putative inner membrane protein translocase component YidC; Provisional	NA|167aa|down_3|NZ_CP013979.1_4371636_4372137_-	PRK14378, PRK14378, membrane protein insertion efficiency factor YidD	NA|138aa|down_4|NZ_CP013979.1_4372129_4372543_-	pfam00825, Ribonuclease_P, Ribonuclease P	NA|46aa|down_5|NZ_CP013979.1_4372551_4372689_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
