assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	1	652298-652438	1	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Orphan	CACGCCGCATCCGCCAGTGGCGCGGTGCAGATGCCGGATGC	41	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA|357aa|down_1|NZ_CP016018.1_654892_655963_-	NA|184aa|up_9|NZ_CP016018.1_642019_642571_+	pfam10688, Imp-YgjV, Bacterial inner membrane protein	NA|415aa|up_8|NZ_CP016018.1_642575_643820_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|322aa|up_7|NZ_CP016018.1_644218_645184_-	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|329aa|up_6|NZ_CP016018.1_645466_646453_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|231aa|up_5|NZ_CP016018.1_646531_647224_-	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|168aa|up_4|NZ_CP016018.1_647300_647804_-	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|379aa|up_3|NZ_CP016018.1_647888_649025_+	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA|105aa|up_2|NZ_CP016018.1_649308_649623_+	COG4680, COG4680, Uncharacterized protein conserved in bacteria [Function unknown]	NA|139aa|up_1|NZ_CP016018.1_649619_650036_+	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|673aa|up_0|NZ_CP016018.1_650080_652099_-	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|784aa|down_0|NZ_CP016018.1_652524_654876_-	PRK10137, PRK10137, alpha-glucosidase; Provisional	NA|357aa|down_1|NZ_CP016018.1_654892_655963_-	NA	NA|478aa|down_2|NZ_CP016018.1_656096_657530_-	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|150aa|down_3|NZ_CP016018.1_657592_658042_-	PRK10202, ebgC, beta-galactosidase subunit beta	NA|1031aa|down_4|NZ_CP016018.1_658038_661131_-	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|328aa|down_5|NZ_CP016018.1_661314_662298_-	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional	NA|111aa|down_6|NZ_CP016018.1_662516_662849_+	PRK10089, PRK10089, chaperone CsaA	NA|460aa|down_7|NZ_CP016018.1_662890_664270_-	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional	NA|507aa|down_8|NZ_CP016018.1_664687_666208_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|208aa|down_9|NZ_CP016018.1_666361_666985_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	2	979356-979749	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|NZ_CP016018.1_978065_978206_-,NA	NA|434aa|up_9|NZ_CP016018.1_968762_970064_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP016018.1_970111_972346_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP016018.1_972423_972672_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP016018.1_972671_973007_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP016018.1_973077_973869_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP016018.1_974096_975734_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP016018.1_975821_977120_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP016018.1_977179_978052_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP016018.1_978065_978206_-	NA	NA|224aa|up_0|NZ_CP016018.1_978344_979016_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP016018.1_980388_981867_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP016018.1_981893_983171_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP016018.1_983489_984275_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP016018.1_984344_985799_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP016018.1_985820_987230_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP016018.1_987207_987987_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP016018.1_987983_988844_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP016018.1_988991_989567_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP016018.1_989583_989844_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP016018.1_989834_991106_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	3	1005300-1006062	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,12,12	12	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|571aa|up_9|NZ_CP016018.1_993663_995376_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP016018.1_995450_996185_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP016018.1_996543_999210_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|503aa|up_6|NZ_CP016018.1_999624_1001133_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP016018.1_1001125_1001608_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP016018.1_1001620_1002712_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP016018.1_1002714_1003389_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP016018.1_1003375_1003975_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP016018.1_1003990_1004908_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP016018.1_1004909_1005194_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP016018.1_1006144_1007182_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP016018.1_1007433_1008342_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP016018.1_1008343_1009771_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP016018.1_1009770_1010376_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP016018.1_1010425_1010749_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP016018.1_1010942_1011254_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP016018.1_1011272_1011983_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP016018.1_1011982_1012462_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP016018.1_1012458_1013508_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP016018.1_1013488_1014250_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	4	1530947-1531064	4	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|62aa|up_9|NZ_CP016018.1_1520232_1520418_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP016018.1_1520430_1521330_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP016018.1_1521522_1522713_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP016018.1_1522709_1523969_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP016018.1_1523958_1525587_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP016018.1_1525859_1527218_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP016018.1_1527222_1528299_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP016018.1_1528761_1529412_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP016018.1_1529465_1529720_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP016018.1_1529719_1530850_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP016018.1_1531083_1533369_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP016018.1_1534064_1537817_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP016018.1_1537944_1538667_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP016018.1_1538813_1541441_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP016018.1_1541589_1543278_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP016018.1_1543274_1543898_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|down_6|NZ_CP016018.1_1548436_1550086_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_7|NZ_CP016018.1_1550090_1550867_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_8|NZ_CP016018.1_1550940_1552125_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|441aa|down_9|NZ_CP016018.1_1552155_1553478_-	pfam02667, SCFA_trans, Short chain fatty acid transporter
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	5	2133288-2133411	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP016018.1_2142307_2142397_+	NA|471aa|up_9|NZ_CP016018.1_2122742_2124155_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP016018.1_2124711_2124921_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP016018.1_2125375_2126002_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP016018.1_2126022_2128125_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP016018.1_2128137_2128776_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP016018.1_2128839_2129508_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP016018.1_2129504_2130290_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP016018.1_2130293_2131106_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP016018.1_2131117_2132722_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP016018.1_2132847_2133153_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP016018.1_2133725_2134982_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP016018.1_2135022_2136396_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP016018.1_2136610_2137252_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP016018.1_2137291_2138440_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP016018.1_2138730_2139942_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP016018.1_2140054_2140987_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP016018.1_2140983_2142009_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP016018.1_2142307_2142397_+	NA	NA|390aa|down_8|NZ_CP016018.1_2142562_2143732_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP016018.1_2143893_2144475_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	6	2801257-2801348	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA|70aa|up_9|NZ_CP016018.1_2790333_2790543_-,NA	NA|70aa|up_9|NZ_CP016018.1_2790333_2790543_-	NA	NA|1321aa|up_8|NZ_CP016018.1_2790597_2794560_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP016018.1_2794599_2795238_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP016018.1_2795525_2796617_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP016018.1_2796616_2797309_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP016018.1_2797320_2797707_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP016018.1_2797714_2798515_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP016018.1_2798524_2799115_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP016018.1_2799125_2799620_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP016018.1_2799640_2800969_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP016018.1_2801771_2802368_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP016018.1_2802388_2802616_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP016018.1_2802653_2803895_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP016018.1_2804187_2805444_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP016018.1_2805704_2806625_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP016018.1_2806624_2806930_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP016018.1_2807081_2807681_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP016018.1_2807677_2810224_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP016018.1_2810223_2811396_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP016018.1_2811525_2812218_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	7	3063548-3063692	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|330aa|up_9|NZ_CP016018.1_3051446_3052436_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP016018.1_3052832_3053741_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP016018.1_3053932_3055954_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP016018.1_3056532_3057210_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP016018.1_3057202_3057958_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP016018.1_3057944_3059099_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP016018.1_3059095_3060136_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP016018.1_3060222_3061512_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP016018.1_3061570_3062047_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP016018.1_3062198_3063482_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP016018.1_3063715_3065977_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP016018.1_3066159_3067593_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP016018.1_3067668_3068721_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP016018.1_3068904_3069858_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP016018.1_3069898_3070894_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP016018.1_3071048_3071867_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP016018.1_3071867_3072926_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP016018.1_3072928_3073618_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP016018.1_3073617_3074391_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP016018.1_3074557_3074707_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	8	3307854-3307950	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|NZ_CP016018.1_3299649_3300342_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP016018.1_3300561_3301104_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP016018.1_3301574_3302441_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP016018.1_3302442_3302655_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP016018.1_3302762_3303284_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP016018.1_3303319_3304705_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP016018.1_3304878_3305373_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP016018.1_3305375_3306098_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP016018.1_3306215_3306725_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP016018.1_3306721_3307789_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP016018.1_3307983_3308877_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP016018.1_3308873_3309689_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP016018.1_3309699_3310959_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP016018.1_3310968_3312636_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP016018.1_3312952_3314002_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP016018.1_3314023_3315259_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP016018.1_3315269_3316055_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP016018.1_3316282_3317428_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP016018.1_3317449_3318751_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP016018.1_3318807_3320169_-	PRK08044, PRK08044, allantoinase AllB
GCF_001663075.1_ASM166307v1	NZ_CP016018	Escherichia coli strain ER1821R chromosome, complete genome	9	3448096-3448240	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,c2c9_V-U4	NA,NA|28aa|down_2|NZ_CP016018.1_3450285_3450369_-	NA|357aa|up_9|NZ_CP016018.1_3433234_3434305_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP016018.1_3434397_3434979_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP016018.1_3434983_3436801_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP016018.1_3436956_3438330_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP016018.1_3438405_3439725_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP016018.1_3440131_3441427_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP016018.1_3441484_3442174_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP016018.1_3442363_3443566_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP016018.1_3443562_3446709_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP016018.1_3446834_3448019_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP016018.1_3448263_3449172_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP016018.1_3449296_3450208_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP016018.1_3450285_3450369_-	NA	NA|95aa|down_3|NZ_CP016018.1_3450854_3451139_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP016018.1_3451210_3451888_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP016018.1_3452145_3452337_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP016018.1_3452386_3452911_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_7|NZ_CP016018.1_3453093_3453552_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP016018.1_3453671_3454481_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP016018.1_3454497_3455613_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
