assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	1	65217-65340	1	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTT	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|126aa|up_9|NZ_CP013662.1_51229_51607_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|274aa|up_8|NZ_CP013662.1_51609_52431_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|330aa|up_7|NZ_CP013662.1_52427_53417_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|429aa|up_6|NZ_CP013662.1_53416_54703_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|785aa|up_5|NZ_CP013662.1_54755_57110_-	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|272aa|up_4|NZ_CP013662.1_57364_58180_+	PRK09430, djlA, co-chaperone DjlA	NA|220aa|up_3|NZ_CP013662.1_58296_58956_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|969aa|up_2|NZ_CP013662.1_58967_61874_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|784aa|up_1|NZ_CP013662.1_62038_64390_-	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|232aa|up_0|NZ_CP013662.1_64464_65160_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|501aa|down_0|NZ_CP013662.1_65359_66862_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|567aa|down_1|NZ_CP013662.1_66872_68573_-	PRK04123, PRK04123, ribulokinase; Provisional	NA|293aa|down_2|NZ_CP013662.1_68911_69790_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|255aa|down_3|NZ_CP013662.1_69875_70640_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|233aa|down_4|NZ_CP013662.1_70753_71452_-	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|537aa|down_5|NZ_CP013662.1_71435_73046_-	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|328aa|down_6|NZ_CP013662.1_73021_74005_-	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|552aa|down_7|NZ_CP013662.1_74168_75824_-	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|44aa|down_8|NZ_CP013662.1_75912_76044_+	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|393aa|down_9|NZ_CP013662.1_76145_77324_+	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	2	248679-248820	2	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	TGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCG	41	1	1	248720-248779	NZ_CP013662.1_247978-248037	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|262aa|up_9|NZ_CP013662.1_236026_236812_+,NA|160aa|up_8|NZ_CP013662.1_236948_237428_-,NA	NA|262aa|up_9|NZ_CP013662.1_236026_236812_+	NA	NA|160aa|up_8|NZ_CP013662.1_236948_237428_-	NA	NA|257aa|up_7|NZ_CP013662.1_240527_241298_-	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	NA|158aa|up_6|NZ_CP013662.1_241451_241925_+	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|815aa|up_5|NZ_CP013662.1_241967_244412_-	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|193aa|up_4|NZ_CP013662.1_244651_245230_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|256aa|up_3|NZ_CP013662.1_245435_246203_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_2|NZ_CP013662.1_246173_246914_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|250aa|up_1|NZ_CP013662.1_247214_247964_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|166aa|up_0|NZ_CP013662.1_248139_248637_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|580aa|down_0|NZ_CP013662.1_248954_250694_-	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|352aa|down_1|NZ_CP013662.1_251494_252550_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|151aa|down_2|NZ_CP013662.1_252546_252999_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|47aa|down_3|NZ_CP013662.1_253729_253870_+	PRK08179, prfH, peptide chain release factor-like protein; Reviewed	NA|486aa|down_4|NZ_CP013662.1_253926_255384_-	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|153aa|down_5|NZ_CP013662.1_255644_256103_+	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|415aa|down_6|NZ_CP013662.1_256194_257439_+	PRK05077, frsA, esterase FrsA	NA|134aa|down_7|NZ_CP013662.1_257496_257898_+	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|352aa|down_8|NZ_CP013662.1_257936_258992_-	PRK10159, PRK10159, phosphoporin PhoE	NA|368aa|down_9|NZ_CP013662.1_259279_260383_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	3	574956-575052	3	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|454aa|up_9|NZ_CP013662.1_562726_564088_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_CP013662.1_564144_565446_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_CP013662.1_565467_566613_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_CP013662.1_566840_567626_-	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|412aa|up_5|NZ_CP013662.1_567636_568872_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_CP013662.1_568893_569943_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_CP013662.1_570259_571927_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_CP013662.1_571936_573196_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_CP013662.1_573206_574022_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_CP013662.1_574018_574912_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_CP013662.1_575116_576184_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_CP013662.1_576180_576690_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_CP013662.1_576807_577530_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_CP013662.1_577532_578027_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_CP013662.1_578200_579586_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_CP013662.1_579621_580143_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_CP013662.1_580250_580463_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_CP013662.1_580464_581331_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|181aa|down_8|NZ_CP013662.1_581801_582344_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|231aa|down_9|NZ_CP013662.1_582563_583256_+	PRK15195, PRK15195, molecular chaperone FimC
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	4	817968-818093	4	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GCGCATCTTATCCGACCTACGAATCGCATCGAA	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|50aa|up_9|NZ_CP013662.1_806920_807070_+	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ	NA|258aa|up_8|NZ_CP013662.1_807236_808010_+	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|230aa|up_7|NZ_CP013662.1_808009_808699_+	PRK09421, modB, molybdate ABC transporter permease subunit	NA|353aa|up_6|NZ_CP013662.1_808701_809760_+	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|273aa|up_5|NZ_CP013662.1_809760_810579_-	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|332aa|up_4|NZ_CP013662.1_810733_811729_+	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|318aa|up_3|NZ_CP013662.1_811769_812723_-	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|351aa|up_2|NZ_CP013662.1_812906_813959_+	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|478aa|up_1|NZ_CP013662.1_814034_815468_+	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|754aa|up_0|NZ_CP013662.1_815650_817912_+	PRK11413, PRK11413, putative hydratase; Provisional	NA|428aa|down_0|NZ_CP013662.1_818145_819429_-	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|159aa|down_1|NZ_CP013662.1_819580_820057_-	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|430aa|down_2|NZ_CP013662.1_820115_821405_-	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|347aa|down_3|NZ_CP013662.1_821491_822532_+	PRK15108, PRK15108, biotin synthase; Provisional	NA|385aa|down_4|NZ_CP013662.1_822528_823683_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|252aa|down_5|NZ_CP013662.1_823669_824425_+	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|226aa|down_6|NZ_CP013662.1_824417_825095_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|674aa|down_7|NZ_CP013662.1_825673_827695_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|303aa|down_8|NZ_CP013662.1_827886_828795_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|330aa|down_9|NZ_CP013662.1_829191_830181_+	PRK00164, moaA, GTP 3',8-cyclase MoaA
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	5	973941-974089	5	CRISPRCasFinder	no	PrimPol	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GTTCACTGCCGTACAGGCAGCTTAGAAAT	29	0	0	NA	NA	I-F	2	2	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|606aa|down_1|NZ_CP013662.1_976048_977866_-,NA|59aa|down_7|NZ_CP013662.1_985410_985587_-	NA|551aa|up_9|NZ_CP013662.1_960350_962003_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NZ_CP013662.1_962146_963046_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NZ_CP013662.1_963540_964236_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NZ_CP013662.1_964661_966320_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NZ_CP013662.1_966316_967273_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NZ_CP013662.1_967423_968539_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP013662.1_968535_970482_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NZ_CP013662.1_970554_970779_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NZ_CP013662.1_971101_971422_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NZ_CP013662.1_971452_973729_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|401aa|down_0|NZ_CP013662.1_974659_975862_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|606aa|down_1|NZ_CP013662.1_976048_977866_-	NA	NA|99aa|down_2|NZ_CP013662.1_978977_979274_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|66aa|down_3|NZ_CP013662.1_979500_979698_+	pfam13148, DUF3987, Protein of unknown function (DUF3987)	NA|478aa|down_4|NZ_CP013662.1_979916_981350_+	pfam13148, DUF3987, Protein of unknown function (DUF3987)	NA|188aa|down_5|NZ_CP013662.1_982170_982734_+	pfam11726, Inovirus_Gp2, Inovirus Gp2	PrimPol|787aa|down_6|NZ_CP013662.1_982888_985249_+	COG4951, COG4951, Uncharacterized protein conserved in bacteria [Function unknown]	NA|59aa|down_7|NZ_CP013662.1_985410_985587_-	NA	NA|513aa|down_8|NZ_CP013662.1_986005_987544_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|down_9|NZ_CP013662.1_987593_987941_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	6	3187498-3187642	6	CRISPRCasFinder	no	csa3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-A	CACAATGCCTGATGCGACGCTGGAGCGTCTTATCATGCCTACAAA	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|150aa|up_9|NZ_CP013662.1_3178488_3178938_+	pfam06610, AlaE, L-alanine exporter	NA|115aa|up_8|NZ_CP013662.1_3178974_3179319_-	PRK10556, PRK10556, hypothetical protein; Provisional	NA|110aa|up_7|NZ_CP013662.1_3179470_3179800_+	PRK10132, PRK10132, hypothetical protein; Provisional	NA|82aa|up_6|NZ_CP013662.1_3180047_3180293_+	PRK10329, PRK10329, glutaredoxin-like protein NrdH	NA|137aa|up_5|NZ_CP013662.1_3180289_3180700_+	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|715aa|up_4|NZ_CP013662.1_3180672_3182817_+	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|320aa|up_3|NZ_CP013662.1_3182826_3183786_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|401aa|up_2|NZ_CP013662.1_3184139_3185342_+	PRK10070, PRK10070, proline/glycine betaine ABC transporter ATP-binding protein ProV	NA|355aa|up_1|NZ_CP013662.1_3185334_3186399_+	PRK10952, PRK10952, proline/glycine betaine ABC transporter permease ProW	NA|331aa|up_0|NZ_CP013662.1_3186456_3187449_+	PRK11119, proX, proline/glycine betaine ABC transporter substrate-binding protein ProX	NA|395aa|down_0|NZ_CP013662.1_3187740_3188925_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|246aa|down_1|NZ_CP013662.1_3189048_3189786_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|112aa|down_2|NZ_CP013662.1_3189775_3190111_+	PRK10408, PRK10408, L-valine transporter subunit YgaH	NA|177aa|down_3|NZ_CP013662.1_3190201_3190732_+	PRK10870, PRK10870, transcriptional repressor MprA; Provisional	NA|391aa|down_4|NZ_CP013662.1_3190858_3192031_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|513aa|down_5|NZ_CP013662.1_3192047_3193586_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|172aa|down_6|NZ_CP013662.1_3193649_3194165_-	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|519aa|down_7|NZ_CP013662.1_3194314_3195871_-	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|143aa|down_8|NZ_CP013662.1_3195943_3196372_-	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|189aa|down_9|NZ_CP013662.1_3196368_3196935_-	PRK10725, PRK10725, fructose-1-phosphate/6-phosphogluconate phosphatase
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	7	3258942-3259581	1,1,7	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	10,9,9	10	TypeI-E	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|254aa|up_9|NZ_CP013662.1_3250815_3251577_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP013662.1_3251557_3252607_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP013662.1_3252603_3253083_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP013662.1_3253082_3253793_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP013662.1_3253811_3254123_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP013662.1_3254316_3254640_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP013662.1_3254689_3255295_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP013662.1_3255294_3256722_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP013662.1_3256723_3257632_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP013662.1_3257883_3258921_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP013662.1_3259677_3259971_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP013662.1_3259967_3260891_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP013662.1_3260887_3261538_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP013662.1_3261519_3262266_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP013662.1_3262276_3263332_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP013662.1_3263343_3263880_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|NZ_CP013662.1_3263876_3265439_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	NA|51aa|down_7|NZ_CP013662.1_3269776_3269929_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_8|NZ_CP013662.1_3270193_3270928_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NZ_CP013662.1_3271002_3272715_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCF_001677515.1_ASM167751v1	NZ_CP013662	Escherichia coli strain 08-00022 chromosome, complete genome	8	3417713-3417802	8	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AAAAATGTCTAAAGCCCCTTTAGATAAAAAT	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|70aa|up_9|NZ_CP013662.1_3413352_3413562_-,NA|103aa|up_8|NZ_CP013662.1_3413561_3413870_-,NA|74aa|up_7|NZ_CP013662.1_3413869_3414091_-,NA|127aa|up_6|NZ_CP013662.1_3414132_3414513_-,NA|69aa|up_5|NZ_CP013662.1_3414636_3414843_-,NA|86aa|up_4|NZ_CP013662.1_3414839_3415097_-,NA|62aa|up_3|NZ_CP013662.1_3415093_3415279_-,NA|54aa|up_1|NZ_CP013662.1_3416935_3417097_-,NA|77aa|up_0|NZ_CP013662.1_3417117_3417348_-,NA|140aa|down_1|NZ_CP013662.1_3419827_3420247_-	NA|70aa|up_9|NZ_CP013662.1_3413352_3413562_-	NA	NA|103aa|up_8|NZ_CP013662.1_3413561_3413870_-	NA	NA|74aa|up_7|NZ_CP013662.1_3413869_3414091_-	NA	NA|127aa|up_6|NZ_CP013662.1_3414132_3414513_-	NA	NA|69aa|up_5|NZ_CP013662.1_3414636_3414843_-	NA	NA|86aa|up_4|NZ_CP013662.1_3414839_3415097_-	NA	NA|62aa|up_3|NZ_CP013662.1_3415093_3415279_-	NA	NA|495aa|up_2|NZ_CP013662.1_3415482_3416967_-	smart00487, DEXDc, DEAD-like helicases superfamily	NA|54aa|up_1|NZ_CP013662.1_3416935_3417097_-	NA	NA|77aa|up_0|NZ_CP013662.1_3417117_3417348_-	NA	NA|193aa|down_0|NZ_CP013662.1_3419034_3419613_+	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|140aa|down_1|NZ_CP013662.1_3419827_3420247_-	NA	NA|207aa|down_2|NZ_CP013662.1_3420246_3420867_-	pfam13643, DUF4145, Domain of unknown function (DUF4145)	NA|252aa|down_3|NZ_CP013662.1_3421620_3422376_-	PRK10871, nlpD, murein hydrolase activator NlpD	NA|766aa|down_4|NZ_CP013662.1_3422790_3425088_+	PRK09970, PRK09970, xanthine dehydrogenase subunit XdhA; Provisional	NA|293aa|down_5|NZ_CP013662.1_3425098_3425977_+	PRK09971, PRK09971, xanthine dehydrogenase subunit XdhB; Provisional	NA|160aa|down_6|NZ_CP013662.1_3425973_3426453_+	PRK09908, PRK09908, xanthine dehydrogenase iron sulfur-binding subunit XdhC	NA|593aa|down_7|NZ_CP013662.1_3426492_3428271_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|397aa|down_8|NZ_CP013662.1_3428746_3429937_+	PRK07200, PRK07200, aspartate/ornithine carbamoyltransferase family protein; Validated	NA|399aa|down_9|NZ_CP013662.1_3429994_3431191_+	TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase
