The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	643453	683634	2841212	head,portal,plate,tail,holin,terminase,capsid,integrase	Staphylococcus_phage(98.39%)	63	635942:635955	661774:661787
635942:635955	attL	TCTTTTTTGAAATA	NA	NA	NA	NA
WP_063282612.1|643453_644500_-|integrase	site-specific integrase	integrase	A0A223LI82	Staphylococcus_phage	53.7	8.8e-106
WP_065354048.1|644632_644824_+	hypothetical protein	NA	A0A0K1LLB1	Staphylococcus_phage	71.4	6.2e-18
WP_065354049.1|644811_645696_-	hypothetical protein	NA	A0A0K1LKD8	Staphylococcus_phage	82.3	6.2e-137
WP_081247735.1|645748_646471_-	LexA family transcriptional regulator	NA	A0A1J0MFC5	Staphylococcus_phage	98.8	2.4e-131
WP_063282614.1|646622_646835_+	helix-turn-helix transcriptional regulator	NA	A0A1J0MF19	Staphylococcus_phage	100.0	2.1e-30
WP_037543667.1|647045_647309_-	CRISPR-associated protein Cas2	NA	A0A1J0MFM9	Staphylococcus_phage	100.0	1.8e-44
WP_015728796.1|647365_647560_+	hypothetical protein	NA	A0A1J0MFF3	Staphylococcus_phage	100.0	5.7e-19
WP_060830240.1|647829_648057_-	hypothetical protein	NA	A0A223LIF2	Staphylococcus_phage	100.0	1.9e-34
WP_060830239.1|648134_648878_+	antirepressor	NA	A0A223LFP5	Staphylococcus_phage	99.6	3.4e-136
WP_065354050.1|648874_649099_+	hypothetical protein	NA	A0A1J0MG48	Staphylococcus_phage	98.6	2.3e-32
WP_065354051.1|649344_649605_+	DUF1108 family protein	NA	A0A223LGR0	Staphylococcus_phage	94.2	1.3e-39
WP_019167935.1|649616_649841_+	hypothetical protein	NA	A0A223LFR3	Staphylococcus_phage	100.0	5.2e-32
WP_065354052.1|649824_650310_+	siphovirus Gp157 family protein	NA	A0A223LGF3	Staphylococcus_phage	98.1	3.8e-80
WP_015728804.1|650310_650979_+	single-stranded DNA-binding protein	NA	A0A1J0MFT8	Staphylococcus_phage	100.0	1.0e-120
WP_015728805.1|650978_651416_+	single-stranded DNA-binding protein	NA	A0A1J0MFL8	Staphylococcus_phage	98.6	2.4e-73
WP_015728806.1|651396_651591_+	hypothetical protein	NA	A0A1J0MFQ8	Staphylococcus_phage	100.0	3.2e-30
WP_065354053.1|651599_652274_+	hypothetical protein	NA	A0A1J0MFS2	Staphylococcus_phage	89.7	2.4e-117
WP_065354054.1|652266_652995_+	DnaD domain protein	NA	A0A1J0MG54	Staphylococcus_phage	97.1	2.4e-118
WP_065354055.1|652999_653347_+	hypothetical protein	NA	A0A1J0MFD5	Staphylococcus_phage	100.0	2.9e-58
WP_065354056.1|653339_654584_+	AAA family ATPase	NA	A0A1J0MF36	Staphylococcus_phage	99.8	2.9e-233
WP_065354057.1|654580_654805_+	hypothetical protein	NA	A0A1J0MFB5	Staphylococcus_phage	100.0	2.2e-35
WP_065354058.1|654785_655217_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A1J0MFP7	Staphylococcus_phage	98.6	2.1e-77
WP_065354059.1|655209_655428_+	hypothetical protein	NA	A0A1J0MFH2	Staphylococcus_phage	95.8	1.3e-32
WP_065354060.1|655438_655747_+	hypothetical protein	NA	A0A223LH51	Staphylococcus_phage	88.2	5.6e-45
WP_082239515.1|656142_656634_+	DUF3310 domain-containing protein	NA	A0A1J0MF65	Staphylococcus_phage	99.4	3.9e-88
WP_063282630.1|656878_657091_+	hypothetical protein	NA	A0A1J0MFY5	Staphylococcus_phage	100.0	1.4e-31
WP_065354061.1|657483_657879_+	hypothetical protein	NA	A0A1J0MFL6	Staphylococcus_phage	86.2	3.7e-57
WP_065354062.1|657875_658256_+	hypothetical protein	NA	A0A223LGW7	Staphylococcus_phage	95.2	6.3e-62
WP_065354064.1|658470_658950_+	hypothetical protein	NA	A0A1J0MFQ4	Staphylococcus_phage	100.0	1.2e-81
WP_154800930.1|658950_659106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015978034.1|659107_659263_+	hypothetical protein	NA	Q4ZD35	Staphylococcus_phage	100.0	1.6e-19
WP_065354065.1|659255_659795_+	dUTP pyrophosphatase	NA	Q4ZD34	Staphylococcus_phage	96.6	3.0e-94
WP_065354066.1|659858_660134_+	hypothetical protein	NA	A0A1W6JNJ2	Staphylococcus_phage	32.0	6.0e-06
WP_065354067.1|660134_660599_+	class I SAM-dependent methyltransferase	NA	A8ATY8	Listeria_phage	72.5	1.1e-65
WP_037542749.1|660595_660784_+	DUF1381 domain-containing protein	NA	A0A223LFC9	Staphylococcus_phage	100.0	3.6e-26
WP_063282639.1|660799_660967_+	hypothetical protein	NA	A0A1J0MFF2	Staphylococcus_phage	100.0	1.0e-21
WP_154800885.1|660966_661110_+	hypothetical protein	NA	A0A1J0MFM4	Staphylococcus_phage	100.0	7.4e-16
WP_037543601.1|661110_661536_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1J0MFD1	Staphylococcus_phage	100.0	7.5e-72
WP_065354068.1|661824_662268_+|terminase	terminase small subunit	terminase	A0A1J0MFZ9	Staphylococcus_phage	100.0	4.9e-74
661774:661787	attR	TCTTTTTTGAAATA	NA	NA	NA	NA
WP_037543597.1|662254_663529_+|terminase	PBSX family phage terminase large subunit	terminase	A0A1J0MFI2	Staphylococcus_phage	100.0	5.3e-238
WP_065354069.1|663540_664986_+|portal	phage portal protein	portal	A0A1J0MFG2	Staphylococcus_phage	98.1	1.7e-269
WP_065354070.1|664978_666328_+|capsid	minor capsid protein	capsid	A0A1J0MF61	Staphylococcus_phage	99.1	5.2e-252
WP_037543592.1|666327_666522_+	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	100.0	3.5e-29
WP_103863095.1|666539_667283_+	DUF4355 domain-containing protein	NA	A0A1J0MFG0	Staphylococcus_phage	96.8	3.9e-68
WP_063282643.1|667301_668213_+	hypothetical protein	NA	A0A1J0MFM8	Staphylococcus_phage	97.7	1.5e-162
WP_063282644.1|668301_668751_+	Ig domain-containing protein	NA	A0A1J0MFM7	Staphylococcus_phage	89.3	8.4e-66
WP_015728833.1|668762_669095_+|head,tail	phage head-tail connector protein	head,tail	A0A1J0MFR4	Staphylococcus_phage	100.0	1.1e-54
WP_065354072.1|669091_669397_+	hypothetical protein	NA	A0A1J0MF86	Staphylococcus_phage	99.0	2.2e-49
WP_065354073.1|669396_669747_+	HK97 gp10 family phage protein	NA	A0A1J0MFN9	Staphylococcus_phage	99.1	7.0e-60
WP_063282647.1|669758_670154_+	hypothetical protein	NA	A0A1J0MF66	Staphylococcus_phage	100.0	6.5e-70
WP_015728836.1|670171_670825_+|tail	phage major tail protein, TP901-1 family	tail	A0A1J0MG89	Staphylococcus_phage	100.0	1.1e-69
WP_060830209.1|670884_671265_+|tail	phage tail protein	tail	A0A1J0MFC0	Staphylococcus_phage	100.0	1.1e-63
WP_065354074.1|671294_671645_+	hypothetical protein	NA	A0A1J0MFN5	Staphylococcus_phage	99.1	1.9e-57
WP_065354075.1|671661_674781_+|tail	phage tail protein	tail	A0A223LI73	Staphylococcus_phage	98.1	2.2e-245
WP_015728840.1|674793_675726_+|tail	phage tail family protein	tail	A0A1J0MF79	Staphylococcus_phage	100.0	1.8e-179
WP_065354076.1|675738_677136_+	hypothetical protein	NA	A0A1J0MF94	Staphylococcus_phage	98.9	1.7e-258
WP_065354077.1|677139_677832_+	hypothetical protein	NA	A0A1J0MFD6	Staphylococcus_phage	98.7	1.2e-100
WP_063282652.1|677843_678887_+	hypothetical protein	NA	A0A1J0MFI8	Staphylococcus_phage	99.7	1.5e-190
WP_065354078.1|678903_680175_+|plate	BppU family phage baseplate upper protein	plate	A0A1J0MFQ3	Staphylococcus_phage	99.3	6.2e-239
WP_065354079.1|680207_680582_+	hypothetical protein	NA	A0A1J0MFD0	Staphylococcus_phage	94.4	4.4e-52
WP_065354080.1|680704_682594_+	CHAP domain-containing protein	NA	A0A1J0MFI1	Staphylococcus_phage	99.0	0.0e+00
WP_060830201.1|682611_682866_+|holin	phage holin	holin	A0A1J0MFP5	Staphylococcus_phage	96.4	1.4e-38
WP_065354081.1|682878_683634_+	CHAP domain-containing protein	NA	A0A1J0MF88	Staphylococcus_phage	96.0	8.1e-146
>prophage 2
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1109658	1131053	2841212		Staphylococcus_phage(94.44%)	22	NA	NA
WP_014613578.1|1109658_1111062_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.3	2.4e-135
WP_014613579.1|1111064_1112051_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	47.6	7.3e-78
WP_014613580.1|1112026_1112278_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	70.6	4.6e-29
WP_014613581.1|1112336_1112807_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	53.8	7.1e-39
WP_082239543.1|1112811_1113564_+	prolyl oligopeptidase family serine peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	61.6	2.3e-84
WP_065354154.1|1113961_1115542_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	76.2	7.5e-242
WP_014613585.1|1117290_1118202_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	68.3	9.4e-88
WP_014613586.1|1118343_1119180_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	69.3	5.0e-112
WP_014613587.1|1119281_1119629_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_014613589.1|1120022_1120325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354155.1|1120477_1121188_+	transaldolase	NA	M1PR54	Cyanophage	39.0	1.5e-21
WP_063278602.1|1121354_1121804_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	36.7	1.3e-10
WP_014613592.1|1121806_1122238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080552908.1|1122240_1122726_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	36.7	3.8e-19
WP_014613594.1|1122926_1123151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354156.1|1123307_1124171_+	autolysin	NA	A0A1W6JQU5	Staphylococcus_phage	41.7	4.2e-37
WP_063284446.1|1124559_1126128_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	60.3	2.0e-13
WP_014613597.1|1126584_1127631_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	54.7	1.4e-106
WP_014613598.1|1127635_1128265_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	59.5	7.2e-63
WP_065354157.1|1128278_1129460_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	65.9	5.3e-152
WP_103926881.1|1129477_1129942_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	65.6	3.2e-52
WP_014613601.1|1130066_1131053_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	67.0	2.8e-122
>prophage 3
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1135170	1142961	2841212	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_014613607.1|1135170_1135734_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	56.8	1.5e-56
WP_014613608.1|1135730_1136684_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	80.4	6.4e-63
WP_065354160.1|1136831_1138013_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	62.2	2.2e-137
WP_100040084.1|1138303_1140736_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	81.8	0.0e+00
WP_014613611.1|1140762_1141074_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.9	1.7e-33
WP_063278942.1|1141704_1142961_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	69.5	1.3e-31
>prophage 4
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1266118	1274950	2841212	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_014613720.1|1266118_1267117_+	Holliday junction branch migration DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	29.1	8.0e-08
WP_014613721.1|1267134_1268160_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_014613722.1|1268177_1269317_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	1.2e-87
WP_014613723.1|1269333_1269597_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.9	2.0e-06
WP_065354186.1|1269738_1272018_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	32.0	3.2e-28
WP_065354672.1|1272134_1274420_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.9	2.9e-69
WP_014613726.1|1274431_1274950_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.0	8.9e-27
>prophage 5
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1620276	1642249	2841212		Staphylococcus_phage(88.24%)	29	NA	NA
WP_065354247.1|1620276_1620864_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0N7GFG7	Staphylococcus_phage	74.5	1.5e-78
WP_065354248.1|1620868_1621294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354249.1|1621299_1622019_-	NTP pyrophosphohydrolase	NA	A0A0N9SIY2	Staphylococcus_phage	66.4	1.1e-86
WP_065354250.1|1622032_1622269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354251.1|1622288_1622525_-	thioredoxin family protein	NA	A0A0N9SGY3	Staphylococcus_phage	52.6	2.7e-15
WP_065354252.1|1622524_1623175_-	AAA family ATPase	NA	A0A0N9RTZ3	Staphylococcus_phage	53.0	5.9e-52
WP_065354253.1|1623188_1624208_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N9SK77	Staphylococcus_phage	71.6	9.6e-142
WP_065354255.1|1624802_1625630_-	HNH endonuclease	NA	A0A0N9SHZ0	Staphylococcus_phage	60.7	2.2e-99
WP_065354257.1|1627942_1628299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110178903.1|1628312_1628693_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A0N9RZU5	Staphylococcus_phage	50.8	8.0e-25
WP_158004116.1|1628725_1628866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354258.1|1628900_1629590_-	hypothetical protein	NA	A0A0N9RRN5	Staphylococcus_phage	41.7	9.1e-43
WP_065354259.1|1629602_1630115_-	siphovirus Gp157 family protein	NA	A0A0N9SIY9	Staphylococcus_phage	53.5	7.0e-40
WP_065354260.1|1630201_1630807_-	hypothetical protein	NA	A0A1P8CMJ6	Staphylococcus_phage	31.8	1.1e-23
WP_065354261.1|1630806_1631589_-	prohibitin family protein	NA	W5RAS0	Staphylococcus_phage	62.4	2.4e-68
WP_065354262.1|1631588_1631900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354263.1|1631896_1632403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354264.1|1632425_1633277_-	DNA (cytosine-5-)-methyltransferase	NA	A0A0N9SK84	Staphylococcus_phage	33.2	7.8e-28
WP_119529671.1|1633348_1633513_+	DNA cytosine methyltransferase	NA	Q77YW9	Bacillus_phage	57.7	3.4e-09
WP_065354265.1|1633811_1634402_-	nucleoside 2-deoxyribosyltransferase	NA	A0A1X9SIR5	Staphylococcus_phage	77.9	1.9e-86
WP_137987001.1|1634428_1634653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_137987002.1|1634637_1634949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354268.1|1634941_1635262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354269.1|1635287_1635536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354270.1|1635695_1636067_-	nuclease	NA	A0A1W6JQ32	Staphylococcus_phage	63.5	2.9e-35
WP_065354677.1|1636095_1637415_-	ATP-dependent DNA ligase	NA	A0A0N9SK95	Staphylococcus_phage	54.9	2.9e-130
WP_065354271.1|1637389_1637737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354272.1|1637818_1638238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354273.1|1638319_1642249_-	DNA polymerase III subunit alpha	NA	A0A1P8CX14	Bacillus_phage	42.7	0.0e+00
>prophage 6
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1646585	1671694	2841212	transposase	Staphylococcus_phage(62.5%)	40	NA	NA
WP_065354283.1|1646585_1646858_-	hypothetical protein	NA	A0A0A7NNM5	Lactobacillus_phage	45.1	2.7e-06
WP_065354284.1|1647279_1648632_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A142F1Q5	Bacillus_phage	40.6	4.5e-70
WP_065354285.1|1648809_1649202_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	46.8	4.5e-23
WP_065354286.1|1649198_1649447_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_065354287.1|1649560_1649830_+	YolD-like family protein	NA	A0A2H4JEH6	uncultured_Caudovirales_phage	42.4	2.0e-06
WP_065354288.1|1649850_1650561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354289.1|1650612_1650882_-	hypothetical protein	NA	A0A0N9STI7	Staphylococcus_phage	50.6	6.5e-13
WP_065354290.1|1650902_1651343_-	hypothetical protein	NA	Q4ZBC7	Staphylococcus_virus	40.7	1.6e-21
WP_065354291.1|1651375_1651882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354292.1|1651924_1652410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354294.1|1652619_1653057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158004119.1|1653145_1653319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354295.1|1653315_1653504_-	hypothetical protein	NA	Q4ZDZ4	Staphylococcus_virus	58.2	8.2e-07
WP_065354296.1|1653509_1654028_-	dUTPase	NA	A0A2H4JAI9	uncultured_Caudovirales_phage	71.8	5.2e-59
WP_065354297.1|1654031_1654352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354298.1|1654606_1654978_-	hypothetical protein	NA	A0A142F184	Bacillus_phage	60.6	2.0e-33
WP_065354299.1|1654978_1655158_-	hypothetical protein	NA	Q4ZD38	Staphylococcus_phage	76.3	2.6e-18
WP_158004120.1|1655158_1655314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354300.1|1655314_1655794_-	hypothetical protein	NA	A0A1J0MFQ4	Staphylococcus_phage	98.1	3.8e-80
WP_065354301.1|1655983_1658296_-	AAA family ATPase	NA	A0A2H4IYY2	uncultured_Caudovirales_phage	49.7	1.1e-220
WP_065354302.1|1658296_1658698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354303.1|1658687_1658969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354304.1|1658978_1659389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354305.1|1659561_1659984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354306.1|1659983_1660364_-	hypothetical protein	NA	A0A223LGW7	Staphylococcus_phage	76.2	3.8e-51
WP_065354307.1|1660360_1660756_-	hypothetical protein	NA	A0A1J0MFF1	Staphylococcus_phage	68.9	1.7e-41
WP_020219705.1|1660755_1661004_-	hypothetical protein	NA	A0A223LIA3	Staphylococcus_phage	100.0	8.5e-44
WP_065354678.1|1661003_1661441_-	hypothetical protein	NA	V5XV46	Staphylococcus_phage	89.9	1.2e-64
WP_065354308.1|1661548_1661767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354309.1|1661756_1661978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354311.1|1662343_1662898_-	hypothetical protein	NA	I6X459	Staphylococcus_phage	43.6	1.5e-32
WP_065354312.1|1662914_1663145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354313.1|1663228_1663642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354314.1|1663631_1664045_-	hypothetical protein	NA	A0A2P1JU11	Anoxybacillus_phage	38.7	4.1e-06
WP_065354315.1|1664393_1666148_-	single-stranded DNA-binding protein	NA	A0A0N9SK20	Staphylococcus_phage	58.7	3.3e-198
WP_065354316.1|1666144_1667260_-	hypothetical protein	NA	A0A0N9RRG7	Staphylococcus_phage	62.8	1.6e-134
WP_065354317.1|1667275_1668835_-	helicase DnaB	NA	A0A0N9SIU7	Staphylococcus_phage	71.9	1.1e-218
WP_065354318.1|1668848_1669346_-	hypothetical protein	NA	A0A0N9S850	Staphylococcus_phage	53.6	4.5e-36
WP_065354319.1|1669414_1670389_-	ATP-binding protein	NA	A0A0N9SGS5	Staphylococcus_phage	70.2	2.1e-133
WP_065354320.1|1670743_1671694_-	hypothetical protein	NA	A0A0N7GFF9	Staphylococcus_phage	50.0	5.9e-77
>prophage 7
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1675853	1742067	2841212	holin,terminase,tail,integrase	Staphylococcus_phage(87.5%)	58	1679895:1679910	1751995:1752010
WP_137987003.1|1675853_1676951_-|integrase	site-specific integrase	integrase	A0A0N9SK33	Staphylococcus_phage	50.6	2.4e-85
WP_065354326.1|1677535_1677892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_137987004.1|1677926_1678118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354328.1|1678200_1678728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354329.1|1678747_1679317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354330.1|1679429_1679702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354331.1|1679744_1680368_-	hypothetical protein	NA	NA	NA	NA	NA
1679895:1679910	attL	CTTTTTCACATCATTA	NA	NA	NA	NA
WP_065354332.1|1680367_1680718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354333.1|1680704_1680992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354334.1|1681038_1681344_-	hypothetical protein	NA	A0A220BZ01	Staphylococcus_phage	60.4	5.1e-30
WP_082239522.1|1681346_1681652_-	hypothetical protein	NA	A0A0N9RTT7	Staphylococcus_phage	34.3	5.4e-08
WP_065354335.1|1681638_1681971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354336.1|1682001_1682331_-	hypothetical protein	NA	A0A220BZD5	Staphylococcus_phage	42.6	7.4e-19
WP_065354337.1|1682372_1682675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354338.1|1682688_1683285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354339.1|1683543_1683783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354340.1|1683865_1684297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354341.1|1684382_1684616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354342.1|1684711_1685029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354343.1|1687452_1687794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354344.1|1687790_1688102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354345.1|1688118_1688727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354346.1|1689614_1690520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354347.1|1692965_1694444_+	hypothetical protein	NA	A0A0N9SGU3	Staphylococcus_phage	46.7	2.7e-113
WP_065354348.1|1694661_1694997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354349.1|1695016_1695202_+	hypothetical protein	NA	A0A0N7GFG2	Staphylococcus_phage	57.9	1.9e-11
WP_065354350.1|1695204_1696413_+	hypothetical protein	NA	W5RV85	Staphylococcus_phage	33.3	6.2e-55
WP_065354351.1|1697705_1698590_+	hypothetical protein	NA	A0A0N9SHV5	Staphylococcus_phage	56.4	4.7e-92
WP_065354352.1|1698589_1700401_+|terminase	terminase	terminase	A0A0N9RZP6	Staphylococcus_phage	77.3	3.8e-157
WP_065354353.1|1700420_1701965_+	hypothetical protein	NA	A0A0N9SK48	Staphylococcus_phage	68.0	1.8e-200
WP_065354354.1|1701967_1703353_+	hypothetical protein	NA	A0A0N9RRJ7	Staphylococcus_phage	48.4	8.6e-101
WP_065354355.1|1703381_1703819_+	hypothetical protein	NA	A0A0N9SIW4	Staphylococcus_phage	65.1	1.6e-45
WP_065354356.1|1703850_1704855_+	hypothetical protein	NA	A0A0N9S885	Staphylococcus_phage	77.6	6.9e-84
WP_065354357.1|1705543_1705963_+	hypothetical protein	NA	A0A0N9RTW0	Staphylococcus_phage	68.6	1.4e-41
WP_065354358.1|1705962_1706631_+	hypothetical protein	NA	A0A0N9SHW2	Staphylococcus_phage	61.3	2.2e-70
WP_065354681.1|1706620_1707142_+	hypothetical protein	NA	A0A0N9ST98	Staphylococcus_phage	71.3	1.8e-67
WP_065354359.1|1707146_1707953_+	hypothetical protein	NA	A0A0N9RZR7	Staphylococcus_phage	45.2	3.9e-53
WP_065354360.1|1707995_1708730_+	hypothetical protein	NA	A0A0N7GFG4	Staphylococcus_phage	53.3	1.8e-65
WP_082239545.1|1708819_1709089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_137987005.1|1709157_1709724_+	hypothetical protein	NA	A0A0N9SK55	Staphylococcus_phage	51.4	2.6e-43
WP_065354362.1|1709710_1710187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354682.1|1710220_1711228_+|integrase	site-specific integrase	integrase	A0A0N9SIX3	Staphylococcus_phage	69.2	2.9e-138
WP_065354363.1|1711320_1715331_+|tail	phage tail tape measure protein	tail	A0A0N9S894	Staphylococcus_phage	43.4	3.5e-227
WP_065354364.1|1715297_1719878_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0N9S894	Staphylococcus_phage	52.9	4.6e-260
WP_065354365.1|1719895_1721980_+	hypothetical protein	NA	A0A0N9SGW2	Staphylococcus_phage	53.6	2.4e-216
WP_065354366.1|1722100_1729513_+	hypothetical protein	NA	A0A0N9RTX0	Staphylococcus_phage	40.7	0.0e+00
WP_065354367.1|1729532_1729889_+	hypothetical protein	NA	A0A0N9SK58	Staphylococcus_phage	49.6	8.9e-18
WP_065354368.1|1729888_1730068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354369.1|1732886_1733291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354370.1|1733443_1733764_+|holin	phage holin	holin	A0A1D6Z272	Staphylococcus_phage	44.0	3.0e-09
WP_065354371.1|1733813_1735781_+	hypothetical protein	NA	A0A0N9RRL9	Staphylococcus_phage	31.6	1.1e-16
WP_065354372.1|1735791_1736121_+	hypothetical protein	NA	A0A2H4JDD2	uncultured_Caudovirales_phage	46.2	7.4e-19
WP_065354373.1|1736126_1736279_+	XkdX family protein	NA	H9A0Q0	Staphylococcus_phage	78.7	6.6e-15
WP_065354374.1|1736346_1737804_+	CHAP domain-containing protein	NA	Q4ZBG9	Staphylococcus_virus	49.3	1.5e-127
WP_065354375.1|1737863_1738046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354376.1|1738201_1738561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082239546.1|1738673_1739600_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	26.9	7.7e-13
WP_065354378.1|1739892_1742067_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	24.6	6.6e-23
1751995:1752010	attR	CTTTTTCACATCATTA	NA	NA	NA	NA
>prophage 8
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	1966905	1975325	2841212		Synechococcus_phage(33.33%)	9	NA	NA
WP_015728945.1|1966905_1967472_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.9	2.3e-28
WP_065354425.1|1967471_1968503_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.7	1.2e-62
WP_014614274.1|1968506_1969928_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.4	3.2e-50
WP_065354426.1|1969906_1972096_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.3	7.4e-139
WP_014614276.1|1972088_1972760_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_014614277.1|1972761_1973022_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014614278.1|1973024_1973726_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.2	1.0e-49
WP_080552893.1|1973722_1974895_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_014614280.1|1974842_1975325_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.9	3.1e-21
>prophage 9
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	2033378	2044969	2841212	transposase	Streptococcus_phage(88.89%)	11	NA	NA
WP_000284571.1|2033378_2034983_+|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
WP_001835223.1|2035538_2035736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000802831.1|2035703_2036363_-	RibD family protein	NA	A0A1B0RXM8	Streptococcus_phage	100.0	3.1e-125
WP_072387101.1|2036473_2036881_-	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
WP_001079938.1|2036853_2037426_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
WP_001096887.1|2037701_2038496_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_000627290.1|2038588_2039131_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_000662263.1|2040067_2040802_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_000228166.1|2040782_2041652_-	hypothetical protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000567888.1|2041754_2042000_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_082239526.1|2042863_2044969_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	98.6	1.2e-268
>prophage 10
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	2208094	2256375	2841212	head,portal,tail,protease,holin,terminase,capsid,integrase	Staphylococcus_phage(84.85%)	72	2209597:2209618	2250957:2250978
WP_014614488.1|2208094_2208592_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	31.7	5.2e-16
WP_014614489.1|2208688_2209276_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.7	1.4e-52
2209597:2209618	attL	TTTTTAGGGACCCATTAGGGAC	NA	NA	NA	NA
WP_065354463.1|2209669_2210005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354464.1|2210022_2210376_-	hypothetical protein	NA	A0A2H4J1J0	uncultured_Caudovirales_phage	49.1	8.5e-05
WP_082239529.1|2210505_2210658_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_065354465.1|2210654_2211005_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354466.1|2211053_2212442_-	CHAP domain-containing protein	NA	A0A1D6Z273	Staphylococcus_phage	57.9	1.4e-148
WP_065354467.1|2212455_2212761_-|holin	phage holin	holin	A0A068A215	Staphylococcus_phage	60.2	5.4e-24
WP_096533233.1|2212888_2213176_-	DUF2951 family protein	NA	A0A1J0MFW4	Staphylococcus_phage	100.0	2.2e-43
WP_020220196.1|2213196_2213472_-	hypothetical protein	NA	A0A1J0MFP4	Staphylococcus_phage	100.0	2.9e-45
WP_065354469.1|2217698_2219189_-|tail	phage tail protein	tail	A0A1J0MFV2	Staphylococcus_phage	98.2	1.1e-287
WP_065354470.1|2219188_2223523_-|tail	phage tail tape measure protein	tail	A0A1J0MFP9	Staphylococcus_phage	82.5	0.0e+00
WP_096533186.1|2223539_2223680_-	hypothetical protein	NA	A0A1J0MFX7	Staphylococcus_phage	100.0	2.6e-18
WP_065354471.1|2223721_2224168_-	hypothetical protein	NA	A0A1J0MFL9	Staphylococcus_phage	100.0	1.6e-72
WP_037542773.1|2224233_2225178_-	hypothetical protein	NA	A0A1J0MFV0	Staphylococcus_phage	100.0	1.0e-174
WP_065354472.1|2225165_2225552_-	hypothetical protein	NA	A0A1J0MFP0	Staphylococcus_phage	100.0	3.7e-70
WP_065354473.1|2225548_2225926_-	HK97 gp10 family phage protein	NA	A0A1J0MGE3	Staphylococcus_phage	98.4	8.1e-62
WP_065354474.1|2225925_2226258_-|head,tail	head-tail adaptor protein	head,tail	A0A1J0MG09	Staphylococcus_phage	100.0	1.4e-57
WP_099984945.1|2226238_2226529_-|head,tail	phage head-tail adapter protein	head,tail	A0A1J0MFU4	Staphylococcus_phage	100.0	2.7e-49
WP_065354475.1|2226713_2227934_-|capsid	phage major capsid protein	capsid	A0A1J0MFW8	Staphylococcus_phage	100.0	3.2e-224
WP_037542765.1|2228012_2228585_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1J0MFL1	Staphylococcus_phage	100.0	2.0e-104
WP_137987008.1|2228559_2229774_-|portal	phage portal protein	portal	A0A1J0MFU3	Staphylococcus_phage	99.8	9.5e-229
WP_065354477.1|2229836_2230034_-	hypothetical protein	NA	A0A1J0MFN2	Staphylococcus_phage	100.0	1.6e-24
WP_065354478.1|2230045_2231746_-|terminase	terminase	terminase	A0A1J0MGD9	Staphylococcus_phage	100.0	0.0e+00
WP_065354479.1|2231745_2232216_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0MG04	Staphylococcus_phage	100.0	3.7e-80
WP_065354480.1|2232310_2232667_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	100.0	2.3e-66
WP_065354481.1|2232672_2233050_-	hypothetical protein	NA	A0A1J0MFN7	Staphylococcus_phage	97.6	6.9e-61
WP_065354482.1|2233176_2233599_-	transcriptional regulator	NA	A0A1J0MFW0	Staphylococcus_phage	96.4	9.7e-72
WP_082239530.1|2233610_2233787_-	DUF1514 family protein	NA	A0A1J0MFK3	Staphylococcus_phage	96.6	1.4e-21
WP_065354483.1|2233786_2234092_-	hypothetical protein	NA	A0A1J0MFT0	Staphylococcus_phage	88.0	6.2e-44
WP_065354484.1|2234091_2234259_-	transcriptional regulator	NA	A0A1J0MFF2	Staphylococcus_phage	79.6	2.8e-14
WP_037542749.1|2234274_2234463_-	DUF1381 domain-containing protein	NA	A0A223LFC9	Staphylococcus_phage	100.0	3.6e-26
WP_065354067.1|2234459_2234924_-	class I SAM-dependent methyltransferase	NA	A8ATY8	Listeria_phage	72.5	1.1e-65
WP_065354066.1|2234924_2235200_-	hypothetical protein	NA	A0A1W6JNJ2	Staphylococcus_phage	32.0	6.0e-06
WP_065354065.1|2235263_2235803_-	dUTP pyrophosphatase	NA	Q4ZD34	Staphylococcus_phage	96.6	3.0e-94
WP_015978034.1|2235795_2235951_-	hypothetical protein	NA	Q4ZD35	Staphylococcus_phage	100.0	1.6e-19
WP_154800930.1|2235952_2236108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354064.1|2236108_2236588_-	hypothetical protein	NA	A0A1J0MFQ4	Staphylococcus_phage	100.0	1.2e-81
WP_065354485.1|2236588_2236804_-	hypothetical protein	NA	A0A1J0MFC2	Staphylococcus_phage	97.2	6.3e-35
WP_065354486.1|2236803_2237187_-	hypothetical protein	NA	A0A223LGW7	Staphylococcus_phage	95.2	4.4e-63
WP_082239531.1|2237183_2237579_-	hypothetical protein	NA	A0A1J0MFL6	Staphylococcus_phage	88.5	8.0e-60
WP_065354488.1|2237578_2237827_-	hypothetical protein	NA	A0A1J0MFK9	Staphylococcus_phage	97.6	4.0e-41
WP_063282631.1|2237823_2238003_-	hypothetical protein	NA	A0A1J0MGB9	Staphylococcus_phage	100.0	8.3e-25
WP_082239532.1|2237972_2238185_-	hypothetical protein	NA	A0A1J0MFY5	Staphylococcus_phage	90.0	2.5e-28
WP_065354489.1|2238254_2238440_-	hypothetical protein	NA	A0A223LIA9	Staphylococcus_phage	95.1	1.4e-27
WP_082239515.1|2238429_2238921_-	DUF3310 domain-containing protein	NA	A0A1J0MF65	Staphylococcus_phage	99.4	3.9e-88
WP_065354490.1|2239316_2239625_-	hypothetical protein	NA	A0A223LH51	Staphylococcus_phage	97.1	2.0e-50
WP_065354491.1|2239635_2239848_-	hypothetical protein	NA	A0A1J0MFH2	Staphylococcus_phage	85.3	1.4e-26
WP_065354492.1|2239837_2240266_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A223LGP3	Staphylococcus_phage	90.5	1.0e-68
WP_065354493.1|2240252_2240471_-	hypothetical protein	NA	A0A1J0MFB5	Staphylococcus_phage	94.4	2.3e-32
WP_065354494.1|2240467_2241712_-	AAA family ATPase	NA	A0A1J0MF36	Staphylococcus_phage	98.6	1.0e-230
WP_065354055.1|2241704_2242052_-	hypothetical protein	NA	A0A1J0MFD5	Staphylococcus_phage	100.0	2.9e-58
WP_065354495.1|2242056_2242803_-	DnaD domain protein	NA	A0A1J0MF60	Staphylococcus_phage	94.0	7.6e-120
WP_065354496.1|2242795_2243470_-	hypothetical protein	NA	A0A1J0MFS2	Staphylococcus_phage	96.0	1.4e-125
WP_065354497.1|2243483_2244077_-	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	98.0	8.8e-63
WP_065354498.1|2244073_2244700_-	single-stranded DNA-binding protein	NA	A0A1J0MFG1	Staphylococcus_phage	100.0	3.4e-113
WP_065354499.1|2244700_2245186_-	siphovirus Gp157 family protein	NA	A0A1J0MFF8	Staphylococcus_phage	97.5	1.1e-79
WP_019167935.1|2245169_2245394_-	hypothetical protein	NA	A0A223LFR3	Staphylococcus_phage	100.0	5.2e-32
WP_065354500.1|2245405_2245666_-	DUF1108 family protein	NA	A0A223LGR0	Staphylococcus_phage	94.2	3.0e-39
WP_065354501.1|2245935_2246202_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	52.3	1.2e-16
WP_065354502.1|2246203_2246527_-	DUF771 domain-containing protein	NA	Q4ZD49	Staphylococcus_phage	99.1	4.1e-54
WP_065354503.1|2246565_2247333_-	phage antirepressor	NA	Q4ZAL8	Staphylococcus_virus	78.6	9.6e-110
WP_065354504.1|2247389_2247860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354505.1|2247822_2248056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354506.1|2248069_2248285_-	transcriptional regulator	NA	Q4ZA66	Staphylococcus_virus	88.7	3.3e-28
WP_065354507.1|2248479_2249172_+	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC5	Staphylococcus_phage	70.1	2.9e-81
WP_065354508.1|2249227_2249863_+	hypothetical protein	NA	Q4ZD54	Staphylococcus_phage	91.2	6.4e-59
WP_065354509.1|2249918_2250956_+|integrase	site-specific integrase	integrase	Q4ZD55	Staphylococcus_phage	99.1	9.4e-193
WP_014614491.1|2251940_2252885_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.6	3.5e-53
2250957:2250978	attR	TTTTTAGGGACCCATTAGGGAC	NA	NA	NA	NA
WP_015728762.1|2252931_2253927_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.0	5.3e-52
WP_014614493.1|2253928_2254837_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	33.6	7.3e-08
WP_014614494.1|2255442_2256375_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.5	3.2e-83
>prophage 11
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	2327845	2338668	2841212		Streptococcus_phage(14.29%)	13	NA	NA
WP_037543783.1|2327845_2329783_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	37.5	7.3e-106
WP_014614543.1|2330127_2331132_-	biotin-dependent carboxyltransferase family protein	NA	NA	NA	NA	NA
WP_037543786.1|2331128_2331812_-	allophanate hydrolase subunit 1	NA	NA	NA	NA	NA
WP_014614545.1|2331822_2332032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354524.1|2332040_2332655_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_037543791.1|2332651_2333800_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	44.8	5.6e-29
WP_065354525.1|2333783_2334377_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.4	7.8e-35
WP_065354526.1|2334637_2335306_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.7	2.6e-63
WP_063284910.1|2335305_2335737_+	6-carboxytetrahydropterin synthase QueD	NA	A0A2H4GYB3	Pseudomonas_phage	30.7	8.0e-05
WP_014614550.1|2335729_2336443_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	41.8	2.7e-50
WP_037543793.1|2336590_2337190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614552.1|2337260_2337515_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014614553.1|2337687_2338668_-	glycosyltransferase	NA	A0A192Y8W7	Salmonella_phage	42.4	3.2e-65
>prophage 12
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	2438611	2511944	2841212	head,portal,tRNA,plate,tail,protease,holin,terminase,capsid,integrase	Staphylococcus_phage(61.67%)	94	2438475:2438490	2484644:2484659
2438475:2438490	attL	ATGATAGGTGCAAGCA	NA	NA	NA	NA
WP_037543851.1|2438611_2439163_-|integrase	tyrosine-type recombinase/integrase	integrase	A3F636	Streptococcus_phage	31.7	5.4e-22
WP_014614653.1|2439305_2439509_+	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_014614654.1|2439524_2439740_+	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_015728682.1|2440080_2440350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063278866.1|2440563_2441493_+	DMT family transporter	NA	NA	NA	NA	NA
WP_014614657.1|2442986_2443358_+	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_063278865.1|2443568_2444285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063278864.1|2444373_2444877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014614660.1|2444967_2445768_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014614661.1|2445767_2446472_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_064485060.1|2446528_2447479_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_063278862.1|2447468_2448350_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014614664.1|2448923_2449145_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_081247727.1|2449173_2449845_+	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
WP_063278860.1|2449887_2451546_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_014614667.1|2451547_2451958_-	DUF1934 family protein	NA	NA	NA	NA	NA
WP_015728676.1|2452765_2454064_-	HD domain-containing protein	NA	A0A1V0SGM3	Hokovirus	30.6	6.7e-23
WP_014614670.1|2454086_2454566_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014614671.1|2454975_2455311_-	DUF1450 domain-containing protein	NA	NA	NA	NA	NA
WP_065354556.1|2455932_2456649_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_065354557.1|2457869_2458592_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_065354558.1|2458924_2459632_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_065354559.1|2459989_2460745_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_063284873.1|2461108_2461867_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_014614677.1|2462074_2462785_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_065354560.1|2463934_2464654_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_014614679.1|2464859_2465570_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_015728666.1|2465713_2466319_-	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_015728665.1|2466302_2466635_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_065354561.1|2467747_2468083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354562.1|2468100_2468454_-	hypothetical protein	NA	A0A2H4J1J0	uncultured_Caudovirales_phage	50.9	3.8e-05
WP_082239529.1|2468583_2468736_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_065354563.1|2468732_2469083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065354564.1|2469128_2470517_-	CHAP domain-containing protein	NA	A0A1D6Z273	Staphylococcus_phage	58.4	7.7e-150
WP_065354565.1|2470530_2470836_-|holin	phage holin	holin	A0A068A215	Staphylococcus_phage	60.2	2.4e-24
WP_065354566.1|2470901_2471045_-	XkdX family protein	NA	H9A0Q0	Staphylococcus_phage	82.2	4.8e-15
WP_065354567.1|2471037_2471364_-	hypothetical protein	NA	H9A136	Staphylococcus_phage	47.0	8.7e-20
WP_065354568.1|2471376_2472438_-|plate	BppU family phage baseplate upper protein	plate	Q4ZCC6	Staphylococcus_virus	55.6	1.4e-42
WP_065354569.1|2472446_2474333_-	CHAP domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	71.1	5.0e-277
WP_096535957.1|2474461_2474749_-	DUF2951 family protein	NA	A0A1J0MFW4	Staphylococcus_phage	96.8	3.2e-42
WP_019166734.1|2474799_2474949_-	XkdX family protein	NA	NA	NA	NA	NA
WP_065354571.1|2474950_2475376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354572.1|2475375_2476875_-|plate	BppU family phage baseplate upper protein	plate	A0A2I6PES7	Staphylococcus_phage	28.9	3.2e-32
WP_065354105.1|2478582_2479869_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	28.8	4.5e-27
WP_065354575.1|2480702_2482205_-	hypothetical protein	NA	Q4ZCD5	Staphylococcus_virus	70.6	3.7e-206
WP_065354576.1|2482213_2483128_-|tail	phage tail protein	tail	Q4ZCD7	Staphylococcus_virus	72.7	3.6e-132
WP_065354577.1|2483145_2486151_-|terminase	terminase	terminase	Q4ZCD8	Staphylococcus_virus	52.6	2.2e-202
2484644:2484659	attR	ATGATAGGTGCAAGCA	NA	NA	NA	NA
WP_100004554.1|2486153_2486438_-	hypothetical protein	NA	Q4ZCD9	Staphylococcus_virus	72.5	1.9e-31
WP_065354578.1|2486503_2487001_-	hypothetical protein	NA	Q4ZCE0	Staphylococcus_virus	78.8	2.6e-68
WP_065354579.1|2487061_2487658_-|tail	phage tail protein	tail	Q4ZCE1	Staphylococcus_virus	77.4	4.1e-76
WP_065354580.1|2487662_2488085_-	DUF3168 domain-containing protein	NA	Q4ZCE2	Staphylococcus_virus	81.4	9.1e-62
WP_065354581.1|2488095_2488509_-	HK97 gp10 family phage protein	NA	Q4ZCE4	Staphylococcus_virus	86.1	2.0e-66
WP_019167201.1|2488831_2489128_-|head,tail	phage head-tail adapter protein	head,tail	Q4ZCE6	Staphylococcus_virus	76.5	8.4e-38
WP_082239539.1|2489127_2489412_-	Rho termination protein	NA	Q4ZCE7	Staphylococcus_virus	66.3	2.0e-25
WP_065354582.1|2489428_2490265_-|capsid	N4-gp56 family major capsid protein	capsid	Q4ZBR5	Staphylococcus_phage	90.7	1.8e-133
WP_065354583.1|2490285_2490879_-	hypothetical protein	NA	Q4ZBR6	Staphylococcus_phage	76.0	9.8e-46
WP_065354584.1|2491174_2492125_-|capsid	minor capsid protein	capsid	A0A2H4JC26	uncultured_Caudovirales_phage	77.2	2.9e-140
WP_065354585.1|2492093_2493512_-|portal	phage portal protein	portal	Q4ZC74	Staphylococcus_virus	86.0	3.2e-244
WP_065354586.1|2493512_2494778_-|terminase	PBSX family phage terminase large subunit	terminase	Q4ZC75	Staphylococcus_virus	89.3	1.3e-225
WP_065354587.1|2494761_2495250_-|terminase	terminase small subunit	terminase	Q4ZAI5	Staphylococcus_virus	77.8	1.3e-67
WP_065354588.1|2495548_2495968_-	transcriptional regulator	NA	I1W651	Staphylococcus_phage	71.9	1.1e-48
WP_158004123.1|2495970_2496123_-	hypothetical protein	NA	A0A1J0MFM4	Staphylococcus_phage	72.3	8.4e-10
WP_065354589.1|2496122_2496293_-	transcriptional regulator	NA	A0A1J0MFF2	Staphylococcus_phage	61.8	3.9e-08
WP_065354590.1|2496308_2496497_-	DUF1381 domain-containing protein	NA	A0A1J0MFZ5	Staphylococcus_phage	91.9	2.0e-24
WP_065354591.1|2496496_2496697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354592.1|2496877_2497417_-	dUTP pyrophosphatase	NA	Q4ZD34	Staphylococcus_phage	96.6	4.0e-94
WP_015978034.1|2497409_2497565_-	hypothetical protein	NA	Q4ZD35	Staphylococcus_phage	100.0	1.6e-19
WP_157978122.1|2497566_2497722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065354064.1|2497722_2498202_-	hypothetical protein	NA	A0A1J0MFQ4	Staphylococcus_phage	100.0	1.2e-81
WP_065354485.1|2498202_2498418_-	hypothetical protein	NA	A0A1J0MFC2	Staphylococcus_phage	97.2	6.3e-35
WP_065354486.1|2498417_2498801_-	hypothetical protein	NA	A0A223LGW7	Staphylococcus_phage	95.2	4.4e-63
WP_065354593.1|2498797_2499187_-	hypothetical protein	NA	A0A1J0MFL6	Staphylococcus_phage	66.9	2.2e-38
WP_065354594.1|2499186_2499537_-	hypothetical protein	NA	Q4ZD40	Staphylococcus_phage	74.1	2.4e-44
WP_065354596.1|2499738_2500191_-	DUF3310 domain-containing protein	NA	A0A1J0MFT5	Staphylococcus_phage	96.0	1.1e-78
WP_065354597.1|2500347_2500656_-	hypothetical protein	NA	A0A223LH51	Staphylococcus_phage	83.3	2.6e-42
WP_065354491.1|2500666_2500879_-	hypothetical protein	NA	A0A1J0MFH2	Staphylococcus_phage	85.3	1.4e-26
WP_065354493.1|2501284_2501503_-	hypothetical protein	NA	A0A1J0MFB5	Staphylococcus_phage	94.4	2.3e-32
WP_065354056.1|2501499_2502744_-	AAA family ATPase	NA	A0A1J0MF36	Staphylococcus_phage	99.8	2.9e-233
WP_065354055.1|2502736_2503084_-	hypothetical protein	NA	A0A1J0MFD5	Staphylococcus_phage	100.0	2.9e-58
WP_137987007.1|2503120_2503816_-	DnaD domain protein	NA	A0A1J0MG54	Staphylococcus_phage	94.8	7.3e-109
WP_065354598.1|2503808_2504483_-	hypothetical protein	NA	A0A1J0MFS2	Staphylococcus_phage	90.2	4.9e-118
WP_015728806.1|2504491_2504686_-	hypothetical protein	NA	A0A1J0MFQ8	Staphylococcus_phage	100.0	3.2e-30
WP_065354599.1|2504666_2505104_-	single-stranded DNA-binding protein	NA	A0A1J0MFL8	Staphylococcus_phage	97.9	4.1e-73
WP_065354600.1|2505096_2505741_-	ERF family protein	NA	D2JGK1	Staphylococcus_phage	93.3	4.9e-107
WP_065354601.1|2505744_2506293_-	hypothetical protein	NA	A0A0H3U480	Staphylococcus_phage	58.7	4.1e-54
WP_065354602.1|2506285_2506540_-	hypothetical protein	NA	A0A1J0MFA5	Staphylococcus_phage	81.0	1.0e-31
WP_019168341.1|2506551_2506812_-	DUF1108 family protein	NA	A0A223LGR0	Staphylococcus_phage	89.5	9.6e-38
WP_065354603.1|2506881_2507070_-	hypothetical protein	NA	A0A1J0MFC8	Staphylococcus_phage	72.6	4.4e-16
WP_065354604.1|2507185_2507899_-	antirepressor	NA	H9A0Y1	Staphylococcus_phage	60.6	9.0e-70
WP_065354605.1|2507929_2508373_-	hypothetical protein	NA	Q6R853	Staphylococcus_virus	71.4	7.3e-54
WP_019165844.1|2508385_2508625_-	helix-turn-helix transcriptional regulator	NA	Q9MBT3	Staphylococcus_prophage	89.2	3.2e-32
WP_065354606.1|2508795_2509494_+	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC5	Staphylococcus_phage	67.9	2.2e-81
WP_065354607.1|2509685_2510501_+	DUF5067 domain-containing protein	NA	A0A1W6JND4	Staphylococcus_phage	59.9	4.3e-52
WP_065354608.1|2510558_2511944_+	recombinase family protein	NA	Q4ZA74	Staphylococcus_virus	57.3	9.1e-151
>prophage 13
NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2841212	2771544	2782945	2841212	integrase	Staphylococcus_phage(45.45%)	14	2769628:2769644	2779914:2779930
2769628:2769644	attL	ATTATTCCCACTCGATG	NA	NA	NA	NA
WP_051144710.1|2771544_2772057_-	hypothetical protein	NA	Q4ZE87	Staphylococcus_phage	37.4	1.7e-22
WP_037541910.1|2772208_2772553_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	54.0	2.0e-27
WP_037541913.1|2773159_2774815_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	43.0	5.6e-131
WP_037541915.1|2774819_2775689_-	hypothetical protein	NA	A0A1W6JQL5	Staphylococcus_phage	37.7	4.6e-44
WP_037541917.1|2775703_2776024_-	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	56.3	2.3e-25
WP_037541919.1|2776027_2776375_-	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	53.2	6.4e-29
WP_019168679.1|2776438_2777080_-	phage repressor protein	NA	A0A2H4JB17	uncultured_Caudovirales_phage	78.4	1.1e-90
WP_154800901.1|2777083_2777236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037541924.1|2777309_2777570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019168676.1|2777547_2777787_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JFN1	uncultured_Caudovirales_phage	49.0	1.8e-06
WP_065354647.1|2777966_2778593_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	29.6	3.6e-14
WP_037541925.1|2778684_2779821_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	39.2	4.0e-72
WP_014614896.1|2779914_2781456_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
2779914:2779930	attR	ATTATTCCCACTCGATG	NA	NA	NA	NA
WP_014614897.1|2781478_2782945_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.4	6.1e-97
