The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	28919	83113	4147141	transposase,protease	Pithovirus(14.29%)	55	NA	NA
WP_005012067.1|28919_29870_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|29856_30072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|30147_30309_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|30316_30457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|30975_31425_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|31434_32046_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|32204_33059_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|33078_34461_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|34525_35167_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|35306_35765_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|35789_36566_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|36619_37756_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|37752_38703_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807705.1|38801_39428_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_003807706.1|39450_40377_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003819100.1|40385_41972_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929723.1|41968_42973_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003807710.1|43172_44033_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|44064_45066_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003819104.1|45136_45946_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003819105.1|46023_47883_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_010929725.1|48011_49214_-	MFS transporter	NA	NA	NA	NA	NA
WP_004566082.1|49327_50209_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004566083.1|51711_52272_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_005013747.1|52331_53282_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299516.1|53268_53427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111735998.1|53473_53761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|53849_54800_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929727.1|54796_55795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815019.1|55837_56341_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929728.1|56344_57235_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815015.1|57457_58621_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815013.1|58717_59638_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815011.1|59641_60607_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815010.1|60603_61398_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_010929729.1|61391_62096_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_010929730.1|65459_66323_+	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929731.1|66325_67495_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814996.1|67535_69185_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_003814993.1|69186_69621_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814990.1|69645_70047_+	RidA family protein	NA	NA	NA	NA	NA
WP_010929732.1|70140_71766_-	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_010929733.1|72005_73289_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_003814984.1|73305_73959_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_003814980.1|74919_75084_+	rubredoxin	NA	NA	NA	NA	NA
WP_019248876.1|75099_75777_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_010929735.1|75769_76171_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_003820560.1|76184_77138_+	aspartate carbamoyltransferase	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929736.1|77134_78310_+	dihydroorotase	NA	NA	NA	NA	NA
WP_010929737.1|78429_79170_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929738.1|79206_80040_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_023852939.1|80036_81305_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_003814960.1|81311_82040_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_153302769.1|82026_82176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|82162_83113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	307087	366387	4147141	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|307087_308038_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|309361_310138_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|310172_311945_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|311946_312849_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|312973_313333_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|313364_314327_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|314425_315376_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|315388_316324_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|316383_317223_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|317219_318389_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|318385_319675_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|319717_320092_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|320197_320935_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|320942_321647_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|321910_323431_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|323486_324050_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|324068_325100_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|325096_325885_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_023997720.1|326060_327050_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|328806_329757_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|330979_331882_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|331883_332738_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|332784_333894_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|333904_334423_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|334452_335085_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|335156_335816_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|335812_337033_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|337301_338174_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|338329_339067_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852728.1|339069_340665_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|340796_341786_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|341782_342493_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|342588_343605_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|343876_344503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|344558_345686_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|345691_351409_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814281.1|351692_351908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814277.1|351976_352921_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|353109_354045_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|354162_355734_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|355813_357022_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|357519_358437_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|360797_361019_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|361349_362366_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|362450_362702_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|362705_363521_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|363633_364512_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|364623_366387_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 4
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	372542	426283	4147141	transposase	Salmonella_phage(33.33%)	50	NA	NA
WP_010930179.1|372542_373493_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931358.1|373561_374560_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|374564_375245_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|375382_375775_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|375882_376899_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|377138_377924_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|378018_379428_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|379438_380239_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|380259_381030_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|381072_381540_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|381536_382487_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|384435_385314_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|386240_389219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080501793.1|389172_389586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|389572_390523_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|390519_391608_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|391643_392507_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|393646_394036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|394039_394822_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_033446332.1|394855_395608_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|395916_397056_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|397052_397844_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|397840_398590_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|398586_399459_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|399458_400460_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|400456_401620_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|401645_402329_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|402282_403617_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|403609_404704_+	CoA transferase	NA	NA	NA	NA	NA
WP_153302791.1|405307_405484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|405470_406421_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|408361_409621_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|409617_411156_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|411152_412349_-	MFS transporter	NA	NA	NA	NA	NA
WP_029443830.1|412345_413737_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|413733_414750_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|414818_416054_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|416154_416949_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|417318_417726_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|418143_418416_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|418585_418810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|418997_419852_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|419952_420255_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_015040527.1|420281_420917_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|420933_421242_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|421238_422954_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|422956_423574_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|423674_424259_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|424283_424928_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|425332_426283_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	475170	506979	4147141	protease,integrase,tRNA,transposase	Pseudomonas_phage(33.33%)	22	472469:472487	492357:492375
472469:472487	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_029443720.1|475170_475818_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|475814_476597_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|476669_477761_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|478040_479168_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|479509_480556_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|480703_483823_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_010931302.1|483824_486776_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|486791_488003_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|487999_488200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|488186_489137_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|489153_489648_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|489651_489909_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853401.1|489933_491364_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_029443992.1|491445_491730_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|492513_493464_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
492357:492375	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|493882_496447_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|496491_498345_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|498677_500249_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|501690_502641_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|502726_503467_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|503693_504641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|506028_506979_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	756931	850968	4147141	transposase	Bacillus_virus(27.27%)	88	NA	NA
WP_005012067.1|756931_757882_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|757984_758647_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|758741_758912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|759264_760266_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|760268_761465_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|761485_762289_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|762369_762666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|762696_763260_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|763300_764158_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|764165_764915_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|764936_765809_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|765837_766617_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|766650_767448_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014486092.1|768899_770072_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
WP_003808978.1|770102_770495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|770488_771349_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|771352_772315_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|773091_773781_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|774641_775592_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|775941_776811_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|776881_777577_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|777566_778076_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|778072_779293_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|779240_780143_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|781029_782316_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|782354_783728_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|783766_784468_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|784766_785756_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|785856_786318_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|786333_786882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|787023_788499_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|788604_789696_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|789699_790482_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|790491_791280_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|792405_792840_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|792836_793847_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|793890_794817_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|795103_795472_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|795688_796639_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|796683_799110_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|799158_799851_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|799923_801123_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|801140_802046_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|802161_803091_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|803116_804463_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|804490_805240_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|805253_806036_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|806228_807179_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879583.1|807240_808386_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|808862_809699_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|809768_810734_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|810730_811681_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_124740747.1|811667_811874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|812066_812609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|813644_814595_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|814836_815205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|815250_816375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|817509_818250_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|818353_818974_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|819077_820028_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|820024_822133_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|822277_822937_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|822968_823433_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|823708_823894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|823945_824698_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|824704_825967_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|826008_827247_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|828324_829452_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|829462_830290_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|830276_831143_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|832509_832914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|833005_833956_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446288.1|834325_835237_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|835251_835962_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|835958_837203_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|837204_837639_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|837667_837973_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_076879633.1|837866_838085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|838071_839022_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|839078_840227_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|840307_841258_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|841789_842587_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|842634_843288_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|843244_844333_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|844497_846723_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|849000_849897_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_076879632.1|849785_850031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|850017_850968_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	881354	952325	4147141	transposase,protease	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
WP_005012808.1|881354_882305_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|882361_883474_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|885857_886808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|887398_888175_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|888292_888556_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|888656_889661_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|889861_891463_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|891488_892247_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|892338_892995_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|893085_893850_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|893859_894048_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|894103_895147_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|895143_895557_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|895553_896174_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|896454_897405_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|897572_898964_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|899036_899615_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|899731_901129_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|901244_902450_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|902549_903068_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|903162_903408_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|903635_903950_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|904039_909229_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|909225_911394_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023995053.1|911413_913765_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_003820402.1|913769_915089_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|915107_916781_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|916785_917454_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|917610_921432_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|921762_922713_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|922734_923880_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|924028_924958_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|924954_926043_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|926039_926843_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|926839_927571_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|927628_928918_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|929014_929617_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|934170_934509_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|935216_935483_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|937189_938140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|938136_939468_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247695.1|940707_942729_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|942721_943363_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|943359_943767_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|943763_944564_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|944638_945343_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|945374_946169_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|946165_947116_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|947214_948165_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|948263_948698_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|948780_951117_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|951308_952325_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	999719	1080593	4147141	transposase,tRNA	Bacillus_virus(25.0%)	60	NA	NA
WP_010927663.1|999719_1000670_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1000666_1001617_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879546.1|1001603_1001954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931069.1|1001877_1002906_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1002985_1004284_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1004280_1004862_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1005174_1009221_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1009461_1017123_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1017119_1018070_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1019209_1019683_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1019822_1020443_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931063.1|1020578_1021379_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1021433_1022525_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931062.1|1022546_1022990_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1023018_1023651_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1023761_1024178_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1024170_1024863_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1024969_1025344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931058.1|1025420_1026230_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1026325_1027270_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1027308_1028280_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1028370_1028808_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1028866_1029748_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1030751_1031612_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1031644_1033027_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1033023_1034043_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1034415_1034910_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1034917_1035658_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1035738_1037343_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_019248319.1|1037382_1038192_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	1.6e-22
WP_023995127.1|1038296_1040462_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.9e-14
WP_010931047.1|1041342_1042155_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1042167_1042476_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1042593_1044324_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1044325_1045471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810957.1|1046389_1046857_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1046992_1048375_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1048371_1049496_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1049492_1052129_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1052544_1053495_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1057241_1057853_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1058075_1059536_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1059632_1061225_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_076879563.1|1061211_1061490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931039.1|1061548_1061836_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1061837_1063178_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1063273_1063963_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1063975_1065406_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1067130_1067952_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1067962_1069534_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1069562_1070540_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1070566_1071370_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1071366_1072161_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1072168_1073404_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1073396_1073831_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1074580_1075531_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1076152_1077880_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1077991_1079350_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_076879564.1|1079470_1079656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1079642_1080593_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1199988	1252141	4147141	transposase,tRNA	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1199988_1200939_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219858.1|1200925_1201093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1201105_1201459_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1201471_1201834_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1201875_1202301_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1202503_1203760_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1203958_1204939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1205088_1206330_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1206428_1207379_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1207387_1208083_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1210904_1211504_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1211514_1213680_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1213703_1215488_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1215487_1215577_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1216271_1216544_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1216543_1218610_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1218606_1219557_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1219655_1220606_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1220721_1221054_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1221050_1221737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1221723_1222683_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1222724_1225085_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1225084_1225717_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814028.1|1225779_1227159_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1227205_1228561_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_003814025.1|1228839_1229088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1229275_1229593_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1229865_1230381_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1230474_1230636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1230651_1231407_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1231745_1231952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1231959_1232619_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1232913_1235118_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1235228_1236452_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1236574_1237549_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1237616_1238810_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1238824_1239625_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1239621_1241478_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1241474_1242080_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1242098_1243484_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1244209_1245436_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1245524_1246307_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1246405_1247356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1247382_1248156_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1248167_1249409_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1251190_1252141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1297823	1364154	4147141	transposase	Streptococcus_virus(11.11%)	58	NA	NA
WP_005012067.1|1297823_1298774_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1298780_1299893_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1300579_1301782_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1301985_1304646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1304658_1308063_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_023995689.1|1308730_1310956_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1311002_1311329_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1311379_1311988_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1312086_1313037_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1313106_1313871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1313867_1314467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820094.1|1314570_1315416_-	putative membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1315481_1316108_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1316104_1317055_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068977.1|1317041_1317230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930428.1|1317153_1318275_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1318255_1319257_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1319362_1320874_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1320870_1322175_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1322286_1322847_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1323114_1323669_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1324124_1324340_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1324594_1327192_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1327188_1328376_+	cupin	NA	NA	NA	NA	NA
WP_019248658.1|1329036_1329651_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1329739_1330867_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1330878_1331784_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_023994753.1|1332534_1332690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1332676_1333627_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1333808_1334561_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1334629_1335289_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1335285_1336014_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1336026_1338306_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1338330_1338534_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_003811129.1|1338575_1339223_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
WP_010930443.1|1339343_1340261_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1340257_1340971_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1341208_1341979_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1341983_1342583_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1342827_1344318_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1344376_1344661_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010928840.1|1344657_1344786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930445.1|1344798_1344954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1345226_1346153_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1346289_1347030_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1347196_1348573_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1348754_1349660_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1351311_1353114_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1353231_1353882_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1353980_1354931_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1354952_1356173_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1356358_1357771_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1357834_1358902_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811170.1|1358898_1360389_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1360398_1361343_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1361502_1362201_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1362278_1363184_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1363203_1364154_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1400103	1455694	4147141	transposase	Brazilian_cedratvirus(25.0%)	49	NA	NA
WP_005013747.1|1400103_1401054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1401112_1401886_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1401878_1403435_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1403431_1404382_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219857.1|1404368_1404524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810741.1|1405708_1406311_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1406550_1407252_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1407245_1408028_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1408212_1409163_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302777.1|1409149_1409311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930483.1|1409261_1409999_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1410188_1410947_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1410993_1411983_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1412160_1413129_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1414668_1415637_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1415645_1416587_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1417060_1418071_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1418061_1419576_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1419572_1420919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1420921_1421956_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1422005_1423631_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1424183_1425134_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1425238_1426186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1426239_1428054_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1428046_1428721_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1428850_1431925_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1431938_1432238_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1432552_1433176_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1433419_1434289_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1434266_1435211_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930495.1|1435296_1436268_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930496.1|1436335_1437109_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1437105_1438302_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1438332_1439283_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1439504_1440194_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019249354.1|1440258_1441014_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1441065_1442058_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1442067_1443021_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1443136_1444099_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1445500_1445929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1445925_1446876_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1447169_1447892_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1448330_1449518_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1449521_1449902_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1451621_1452593_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1452606_1453320_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1453324_1454242_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1454348_1454645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1454743_1455694_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1688458	1758111	4147141	transposase,tRNA	Staphylococcus_phage(16.67%)	56	NA	NA
WP_003818515.1|1688458_1691116_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1691193_1692396_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1692392_1692905_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810262.1|1693027_1693366_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1693741_1694692_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1694790_1695741_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|1695904_1697800_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|1697913_1698081_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1698144_1698381_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1698749_1699949_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1701465_1702416_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1702867_1703869_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1704041_1704899_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1704895_1706158_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1706258_1706633_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_076879569.1|1706681_1707893_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1707977_1708748_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1708861_1709626_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023996008.1|1709741_1710878_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|1710874_1711681_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|1713425_1714397_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1714553_1715066_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1715224_1716199_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1717199_1717994_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1718019_1718826_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810329.1|1718936_1719527_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1719537_1720716_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1720818_1721193_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1721445_1722777_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1722843_1726074_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1727564_1728311_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1728395_1728857_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1728894_1729953_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|1729915_1731745_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|1731784_1732357_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_015041331.1|1733781_1734693_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
WP_010930728.1|1734921_1736244_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|1736603_1737239_+	membrane protein	NA	NA	NA	NA	NA
WP_076879629.1|1737198_1738149_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|1739019_1739892_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|1739969_1741109_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_029443722.1|1741458_1742724_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|1742729_1743257_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|1743261_1744080_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|1744079_1744802_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|1744823_1745138_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_029443721.1|1745134_1746304_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|1746334_1747210_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|1747206_1748526_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|1748598_1749795_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|1749805_1751293_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|1753887_1754787_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|1754924_1755890_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1755988_1756939_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068978.1|1756982_1757174_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1757160_1758111_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1769607	1819003	4147141	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|1769607_1770558_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|1771695_1771992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|1772166_1773519_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|1773661_1774678_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|1776657_1777671_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|1777757_1778663_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|1778819_1779164_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|1779321_1779780_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|1779793_1782010_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|1782006_1783068_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|1783096_1784071_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|1784022_1784841_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|1784853_1785462_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|1785636_1786032_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|1786050_1787490_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|1787518_1787866_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|1787884_1788835_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299520.1|1788821_1788983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1789487_1790438_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|1790521_1792339_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|1792412_1793060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1793072_1794002_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|1794171_1794636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|1794883_1795564_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|1795612_1797304_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|1797319_1797871_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|1797867_1798239_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|1798351_1799188_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|1799198_1799723_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1799820_1800000_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_076879571.1|1800129_1801161_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|1801234_1801591_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|1801580_1802456_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|1802554_1803439_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|1803460_1804756_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|1805704_1806355_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|1806442_1807963_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|1808220_1810086_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1811131_1812082_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930769.1|1813054_1813414_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|1813401_1814838_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|1814834_1815488_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_076879572.1|1815484_1816684_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|1816781_1818056_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|1818052_1819003_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1830207	1870898	4147141	transposase,protease,tRNA	Klosneuvirus(25.0%)	37	NA	NA
WP_005013747.1|1830207_1831158_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1831256_1832207_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|1832166_1832580_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|1832864_1833164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816717.1|1833573_1835742_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
WP_124740709.1|1836321_1836516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|1836541_1838572_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|1838591_1838804_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|1839081_1839621_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930785.1|1839734_1841042_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|1841106_1842264_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|1842447_1843347_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|1843365_1844670_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|1844635_1845742_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|1845829_1846066_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|1846204_1847275_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|1847278_1848634_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|1848660_1849821_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|1849823_1850462_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930792.1|1850463_1851768_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|1851808_1853104_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|1853110_1853617_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|1853613_1854762_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|1854789_1855215_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|1855537_1858420_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|1858512_1859268_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|1860033_1861383_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|1861481_1862432_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|1862530_1863481_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|1863554_1864028_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|1864053_1865262_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|1865258_1866032_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|1866031_1866655_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|1866820_1867081_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|1867384_1867966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|1868032_1868287_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|1868273_1870898_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 16
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	1898681	1964229	4147141	transposase,protease,tRNA	Lake_Baikal_phage(20.0%)	59	NA	NA
WP_010929577.1|1898681_1899632_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302779.1|1899618_1899777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930573.1|1899832_1900642_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005013747.1|1900766_1901717_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|1901713_1902607_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|1902731_1902926_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|1902925_1903267_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|1903276_1905139_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|1905268_1905781_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|1905783_1906107_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|1906108_1906519_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|1906556_1907768_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|1907785_1908298_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|1908513_1909005_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|1909257_1911294_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|1911371_1912574_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003812472.1|1912624_1913353_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
WP_005012067.1|1914910_1915861_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|1916431_1916644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|1916661_1917393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|1917427_1918069_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_023853213.1|1918061_1918778_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|1920942_1921719_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|1921740_1922898_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|1922894_1923326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015063637.1|1923322_1924126_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_029443773.1|1924139_1924595_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|1924607_1925579_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|1925644_1926868_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|1927095_1928046_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|1928169_1930623_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|1930811_1932116_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|1932220_1932874_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|1932876_1934187_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|1934365_1934944_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|1935055_1935256_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|1935601_1936168_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|1936251_1936455_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|1936761_1937082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|1937123_1937405_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|1937479_1938736_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|1939118_1939448_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|1941017_1941839_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|1941838_1942978_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|1942984_1943881_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|1943877_1945803_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|1946162_1948775_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|1948827_1951128_-	AAA family ATPase	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|1951124_1952333_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|1952594_1952969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1952965_1953916_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|1954014_1956009_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|1956068_1957034_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|1957023_1959885_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|1959887_1960394_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|1960498_1961707_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|1961708_1962647_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|1962808_1963282_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|1963278_1964229_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	2257876	2316120	4147141	transposase,tRNA	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2257876_2258827_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2259306_2259963_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2259977_2261645_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2261647_2262277_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2262488_2263583_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2263727_2264540_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2264543_2266247_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2266297_2267428_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2267614_2268691_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2268772_2269423_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_023853504.1|2269437_2270871_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2271124_2271943_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2271939_2272644_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2273543_2274659_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2274692_2275067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2275089_2276247_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2276259_2276493_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2277127_2280097_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2280111_2280321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2280472_2281102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029443766.1|2281098_2283216_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_010930372.1|2283212_2283893_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2283889_2284450_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2284456_2285554_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_077274082.1|2285691_2286300_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2286296_2287589_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2287602_2288145_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2288154_2288991_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2289024_2290086_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2290127_2291180_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2291195_2291498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2291639_2292590_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996304.1|2292576_2292735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2292768_2294463_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2294459_2295545_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2295592_2296492_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2296502_2297147_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2298168_2301411_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_010930365.1|2301421_2302519_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
WP_003819864.1|2302781_2303765_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
WP_076879624.1|2303863_2304814_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2304912_2305863_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2305872_2306562_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2306621_2307059_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2307104_2307998_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2308045_2309218_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2309214_2310369_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2310565_2310916_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2310905_2311340_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2311356_2312307_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2312454_2312922_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2312902_2314060_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2314125_2315052_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2315169_2316120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	2358399	2424899	4147141	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2358399_2359350_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2359719_2360292_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2360294_2361305_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2361297_2361798_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2361808_2362150_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2362161_2362953_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2362969_2363239_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2363261_2364050_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2364096_2365113_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2365329_2366772_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2366950_2368570_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2368690_2370511_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2370589_2372122_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2372155_2373802_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2373871_2374894_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2374911_2376045_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2376047_2376737_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2376736_2377522_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2377565_2378330_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2378368_2379790_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2379855_2380560_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2380607_2381027_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2381039_2381447_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2381630_2382341_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2382467_2382758_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2382775_2383258_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2387763_2388918_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2389223_2390240_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2390486_2391275_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2391341_2392022_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2392018_2392789_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2392887_2393838_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2393893_2394811_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2394821_2396000_-	mandelate racemase	NA	NA	NA	NA	NA
WP_010930318.1|2396019_2397015_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2398603_2399212_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2399199_2400240_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2400257_2401220_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2401216_2402410_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2402406_2403204_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2403229_2404216_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2404234_2406274_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2406475_2407156_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2407169_2408081_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2408077_2408656_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2408794_2409700_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2409707_2413127_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2413114_2415715_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2416670_2417303_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2417696_2418455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2418451_2419654_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2419841_2420792_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2421699_2422845_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930309.1|2422864_2423587_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2423703_2423883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|2423948_2424899_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	2587464	2653050	4147141	transposase,tRNA	Oenococcus_phage(33.33%)	53	NA	NA
WP_023853639.1|2587464_2588415_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2588513_2589464_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930231.1|2589666_2590656_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_010930230.1|2590739_2591093_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930229.1|2591170_2591779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811662.1|2593452_2594031_-	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_003811660.1|2594055_2595009_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930228.1|2595048_2595966_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033446252.1|2596087_2597014_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930226.1|2597021_2597768_-	aldolase	NA	NA	NA	NA	NA
WP_010930225.1|2598094_2599036_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_003811651.1|2599111_2599234_-	membrane protein	NA	NA	NA	NA	NA
WP_010930224.1|2599262_2600960_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930223.1|2601394_2602816_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930222.1|2602969_2603749_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930221.1|2603873_2604746_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930220.1|2604857_2605982_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_003811636.1|2606027_2606990_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930219.1|2606982_2607837_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811632.1|2607944_2608355_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929956.1|2608351_2609302_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|2609400_2610282_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|2610359_2611739_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|2611777_2612623_-	membrane protein	NA	NA	NA	NA	NA
WP_003813580.1|2612638_2612983_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|2612985_2613522_-	membrane protein	NA	NA	NA	NA	NA
WP_003813585.1|2613694_2614270_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|2614372_2615110_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|2615177_2616815_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|2616922_2617678_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|2617665_2618628_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_003813594.1|2618729_2619530_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|2619591_2621667_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|2621831_2624207_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|2624287_2625643_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2627121_2627844_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2627898_2628882_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2629011_2629962_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2629958_2630861_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2630948_2631707_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248962.1|2631719_2632868_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2632908_2634336_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2634565_2635780_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2635825_2638696_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2641106_2641595_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2641720_2644417_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2644571_2646854_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|2647020_2647653_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|2647751_2648702_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2648748_2649303_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2649370_2650216_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2650285_2651254_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853221.1|2651253_2653050_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	2670620	2730515	4147141	transposase,holin,tRNA	Catovirus(22.22%)	50	NA	NA
WP_010930190.1|2670620_2672141_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2672183_2672486_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2672482_2673115_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2673193_2675059_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_010930187.1|2675055_2675871_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
WP_010930186.1|2675878_2676994_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2677898_2678777_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2678776_2679601_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2679768_2680719_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879621.1|2680901_2683781_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003812697.1|2683762_2684539_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2684631_2686095_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2686091_2686463_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2686480_2687794_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2687830_2688289_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2688401_2689352_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2689348_2690362_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2690501_2691488_+	homoserine kinase	NA	NA	NA	NA	NA
WP_010930177.1|2691531_2692332_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2693134_2694085_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995509.1|2694071_2694233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809618.1|2694236_2694839_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2694857_2695490_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930174.1|2695727_2697614_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2697632_2698475_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2698471_2699830_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2700050_2700845_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2701075_2702569_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2702804_2704886_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2705080_2706121_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2706255_2707272_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2707293_2708151_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2708195_2708972_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_005013747.1|2709339_2710290_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2710316_2710781_-	barstar family protein	NA	NA	NA	NA	NA
WP_054604373.1|2711987_2714276_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2714392_2715265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2715307_2716462_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2716496_2717327_-	transglycosylase	NA	NA	NA	NA	NA
WP_023853525.1|2717410_2718955_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2718997_2719357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2719358_2719772_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2719812_2720130_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2720214_2720931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2721194_2722616_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2722682_2725430_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2725762_2726779_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2727115_2727757_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2727847_2729284_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2729441_2730515_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
>prophage 21
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	2735401	2870565	4147141	transposase,tRNA	uncultured_Caudovirales_phage(10.0%)	118	NA	NA
WP_010931363.1|2735401_2736418_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2737355_2738783_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2738779_2739802_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2739791_2740265_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_023995116.1|2740390_2741293_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2741289_2742933_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|2742929_2743937_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|2744767_2745784_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2745883_2746516_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2746524_2746914_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2746966_2748019_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|2748882_2750589_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|2750662_2751163_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|2751177_2753235_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|2753261_2753555_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|2753656_2754604_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|2754616_2755492_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|2755612_2756173_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|2756207_2756531_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|2756966_2757704_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|2758002_2758953_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|2759196_2759460_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|2759533_2759815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|2759831_2760692_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|2760688_2761024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|2761077_2761728_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|2763408_2764353_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|2764398_2764716_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|2764718_2765657_-	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|2765834_2766320_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|2766338_2766887_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_023994624.1|2766918_2767071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853531.1|2767163_2768297_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443834.1|2768334_2769042_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|2769196_2771545_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930135.1|2772510_2773701_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|2773697_2774471_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|2774500_2775694_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|2775811_2776822_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|2776839_2778876_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|2779070_2779811_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929584.1|2779909_2780860_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|2780902_2782078_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|2782299_2784090_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|2784102_2785764_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|2785776_2788482_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|2788774_2790529_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|2790525_2791152_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|2791148_2792000_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|2792075_2794190_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_023853098.1|2794340_2794991_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|2795136_2795388_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|2795457_2796840_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|2796836_2800016_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|2800823_2801741_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|2801792_2802524_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|2802583_2803156_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|2804664_2805681_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|2805818_2806868_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|2806972_2807923_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|2808018_2808744_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|2808954_2809335_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|2809640_2810513_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|2810520_2810901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|2811054_2812329_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|2813816_2814725_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|2815522_2816587_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_003821528.1|2818423_2819458_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|2819647_2820289_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|2820371_2822198_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|2822441_2823371_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|2823370_2824120_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|2824191_2825106_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|2825125_2826271_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|2826331_2827243_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|2827323_2828274_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|2828372_2828957_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|2828991_2829981_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|2829977_2830919_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|2830915_2832136_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|2832178_2832493_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|2832684_2833044_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_003821510.1|2833045_2834776_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|2834948_2835620_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|2835634_2836963_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|2836959_2837859_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|2837945_2839031_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|2839023_2840157_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|2840156_2842838_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|2843208_2843790_+	OmpA family protein	NA	NA	NA	NA	NA
WP_077274086.1|2843867_2844641_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
WP_010930092.1|2844637_2845315_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|2845530_2846712_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|2847484_2847667_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|2847696_2848647_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_124740670.1|2848633_2848888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004566317.1|2848776_2849169_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|2849445_2850357_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|2850481_2851456_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2851452_2852403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|2852501_2853587_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|2853684_2854095_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|2854710_2856624_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|2856759_2859372_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|2859373_2860108_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|2860271_2861453_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|2861449_2861662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|2861658_2862639_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|2862684_2863512_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930067.1|2863658_2865476_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|2865530_2865914_+	ferredoxin	NA	NA	NA	NA	NA
WP_010930066.1|2865910_2866861_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|2866973_2867225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810837.1|2867418_2867634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|2867730_2868849_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|2868968_2869181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|2869340_2869562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|2869614_2870565_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	2983886	3052889	4147141	transposase	Klosneuvirus(16.67%)	57	NA	NA
WP_041337087.1|2983886_2984837_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|2984833_2985853_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|2985862_2988571_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|2988718_2989375_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_154219863.1|2989334_2989487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2989473_2990424_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930014.1|2990529_2991465_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|2991664_2993359_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|2993393_2994320_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|2994388_2995486_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|2995504_2996368_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|2996379_2997162_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|2997158_2998277_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|2998273_2999806_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|2999846_3000854_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3000998_3001721_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3001736_3002759_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3003075_3003810_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3003894_3005640_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3005636_3006389_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3006433_3007390_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3007478_3008045_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3008052_3008913_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_010930001.1|3008942_3009686_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
WP_003807497.1|3009702_3010386_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3011223_3012138_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3012202_3013111_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3013201_3014626_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3014627_3015950_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3015946_3018085_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3018162_3023283_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3023383_3023692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3023761_3024319_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3024334_3025816_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023853308.1|3025870_3027724_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3027986_3029324_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3029358_3031356_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3031373_3033422_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3033552_3034419_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3034687_3035653_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3035767_3036916_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3037340_3037652_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3037685_3037946_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3038095_3039229_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3039299_3040436_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3040601_3041396_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3041458_3041902_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3042017_3042968_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068980.1|3042954_3043143_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020699729.1|3043090_3043498_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929984.1|3043570_3045766_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3045987_3046938_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3046897_3047422_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3047553_3048525_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3048644_3051089_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3051104_3051695_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3051938_3052889_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	3068335	3168448	4147141	protease,tRNA,tail,transposase,terminase	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
WP_005012067.1|3068335_3069286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3070017_3070395_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3070379_3071081_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3071224_3071917_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3071916_3073020_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3073129_3075502_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3075498_3077058_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3077082_3077880_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3077911_3079057_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3079161_3080604_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_003814416.1|3080606_3081695_-	spore maturation protein	NA	NA	NA	NA	NA
WP_057045090.1|3083973_3084924_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879618.1|3084910_3085129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|3086053_3086611_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3086586_3086937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3087105_3087900_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3087896_3088946_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3088945_3089635_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3089721_3090219_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3090250_3091567_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3091583_3092558_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3092594_3093053_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3093052_3093733_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3093735_3094164_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3094216_3095947_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3096012_3096585_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3096565_3097252_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3097607_3098279_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010926433.1|3098828_3099110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076879540.1|3099106_3099640_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3099621_3100173_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3100151_3100394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3100398_3101211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3101210_3101474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3101514_3101712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3101692_3102109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3102113_3106070_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3106062_3106452_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3106448_3106982_-	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3107049_3107409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3107418_3110031_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3110056_3110347_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3110364_3110694_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3110703_3111222_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3111476_3111977_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3111984_3112407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931438.1|3112403_3112802_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3112798_3113194_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3113193_3113394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3113395_3113878_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3113940_3114192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853024.1|3114201_3114849_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_005012808.1|3114866_3115817_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3116245_3116848_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3116970_3117213_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3117218_3118274_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3118302_3119721_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3119723_3121001_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931448.1|3120987_3121437_-|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_005012067.1|3122112_3123063_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3123080_3123302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|3123316_3124015_+	membrane protein	NA	NA	NA	NA	NA
WP_010931450.1|3124007_3124328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|3124807_3125419_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931452.1|3125484_3125697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3125948_3126899_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3126997_3128071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3128238_3129033_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3129072_3129597_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3129589_3131332_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3131541_3132300_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3132302_3133010_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3133026_3133908_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3133918_3134677_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3134645_3135401_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3135470_3136889_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3136910_3137561_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3137694_3138030_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_023995786.1|3137970_3138132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|3138118_3139069_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3139145_3140966_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3140970_3142044_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3142166_3143135_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3143208_3144120_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3144138_3144711_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3144791_3145340_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3145339_3146929_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3146998_3147238_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_003814219.1|3147278_3148310_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3148369_3149551_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3149647_3150100_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3150109_3151450_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3151766_3152804_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3153185_3153545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3153628_3154570_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3154644_3155595_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3155888_3156983_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3157064_3157946_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3157967_3158807_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3158882_3160400_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3160496_3161597_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3161613_3162036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814195.1|3162058_3162271_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3162317_3163238_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814191.1|3163501_3164170_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3164172_3164502_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3164708_3166142_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3166153_3166537_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3166598_3167399_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_154219861.1|3167346_3167511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015810.1|3167497_3168448_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	3455057	3587983	4147141	transposase,integrase,tRNA	uncultured_Mediterranean_phage(10.34%)	120	3499700:3499717	3544340:3544357
WP_005013747.1|3455057_3456008_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929878.1|3456004_3456640_-	transporter	NA	NA	NA	NA	NA
WP_003818466.1|3456769_3457669_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003807278.1|3457764_3458256_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_010929877.1|3458302_3459268_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929876.1|3460401_3461643_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_003807287.1|3461756_3462773_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929875.1|3462807_3463284_-	membrane protein	NA	NA	NA	NA	NA
WP_003807291.1|3463426_3464335_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929874.1|3464448_3465561_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_003818475.1|3465661_3466195_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818477.1|3466283_3467534_+	kynureninase	NA	NA	NA	NA	NA
WP_003807300.1|3467635_3468148_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_076879639.1|3468053_3468260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3468246_3469197_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929873.1|3469262_3470201_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_010929872.1|3470223_3470850_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_003818481.1|3470846_3471503_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929871.1|3471499_3472102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807309.1|3472108_3472735_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.5e-07
WP_010929869.1|3472876_3473446_+	bacterioferritin	NA	NA	NA	NA	NA
WP_003807313.1|3473516_3474836_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_003807315.1|3474942_3475134_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010929868.1|3475385_3476675_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929867.1|3476829_3477825_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807322.1|3477909_3478584_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3478580_3479531_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068983.1|3479517_3479700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816336.1|3479692_3480934_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_010929866.1|3480930_3481875_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_005012067.1|3481993_3482944_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853484.1|3482903_3483833_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807759.1|3483886_3484222_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010929865.1|3484266_3485031_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929864.1|3485054_3485795_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019248486.1|3485802_3487377_-	acyl--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	2.0e-13
WP_010929862.1|3487390_3488368_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929861.1|3488640_3489240_-	ureidoglycolate hydrolase	NA	NA	NA	NA	NA
WP_094145972.1|3489273_3496176_-	autotransporter BatB	NA	NA	NA	NA	NA
WP_003807750.1|3496622_3496754_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_019248159.1|3496785_3496947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929858.1|3497019_3497226_-	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
WP_010929857.1|3498230_3498890_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010929856.1|3498917_3500063_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
3499700:3499717	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_003807743.1|3500203_3500539_+	YegP family protein	NA	NA	NA	NA	NA
WP_010929855.1|3500613_3501474_-	hypothetical protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
WP_010929854.1|3501737_3502439_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019248860.1|3502608_3503004_+	RidA family protein	NA	NA	NA	NA	NA
WP_005012067.1|3503113_3504064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929852.1|3504074_3504716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926414.1|3504882_3505125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929851.1|3505223_3506174_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929850.1|3506209_3506677_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010926411.1|3506910_3507288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926410.1|3507284_3507467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929849.1|3507470_3508457_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010929848.1|3508453_3509101_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929847.1|3509158_3509686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929846.1|3509719_3510907_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_023853043.1|3510896_3511259_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	47.9	1.8e-13
WP_010929844.1|3511251_3511371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926403.1|3511371_3511572_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|3511568_3512558_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010929841.1|3514044_3516015_-	DUF3120 domain-containing protein	NA	NA	NA	NA	NA
WP_003814626.1|3516256_3516655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929840.1|3516663_3517587_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3518044_3518995_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927254.1|3519225_3520917_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_003816027.1|3520965_3521238_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_003816026.1|3521234_3521606_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|3521701_3521836_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_010929554.1|3522241_3523651_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816023.1|3523647_3524763_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.6e-41
WP_010929838.1|3524857_3527311_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_023853625.1|3527429_3528221_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929836.1|3528340_3529768_+	amidase	NA	NA	NA	NA	NA
WP_010929835.1|3529806_3530778_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929834.1|3531196_3532360_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929833.1|3532447_3533293_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995443.1|3534722_3534863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3534849_3535800_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|3536354_3536729_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|3536803_3537862_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|3537885_3538836_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929808.1|3541717_3542887_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_003815953.1|3542987_3544595_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
3544340:3544357	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_010929810.1|3544641_3546663_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815955.1|3546691_3546937_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_004565905.1|3546950_3548141_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_010929811.1|3548336_3549302_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929812.1|3549324_3550464_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929813.1|3550675_3551638_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929814.1|3551761_3553786_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929815.1|3553982_3556226_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_003815964.1|3556504_3556963_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929816.1|3557890_3560512_-	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_010929817.1|3560575_3563203_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929818.1|3563354_3564419_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815975.1|3564415_3565189_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929819.1|3565197_3566031_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818225.1|3566043_3566823_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003818226.1|3566857_3568330_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929821.1|3568357_3569116_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929822.1|3569171_3571022_-	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929823.1|3571115_3571592_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853391.1|3571608_3572529_-	bestrophin	NA	NA	NA	NA	NA
WP_003818232.1|3572635_3573136_+	SET domain-containing protein	NA	NA	NA	NA	NA
WP_010929826.1|3573509_3574202_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_153302770.1|3574356_3574524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3574510_3575461_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931556.1|3575457_3579231_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010931557.1|3579567_3581457_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931558.1|3581468_3582362_+	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_003817654.1|3582387_3583263_+	thiazole synthase	NA	NA	NA	NA	NA
WP_010931560.1|3583259_3584111_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003817656.1|3584172_3584853_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_023853185.1|3584856_3585216_+	outer membrane efflux domain protein	NA	NA	NA	NA	NA
WP_019247190.1|3585216_3586176_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_003815102.1|3586196_3586685_-	D-beta-D-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_010931561.1|3586966_3587983_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	3754096	3819008	4147141	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|3754096_3754582_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|3754670_3754808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|3754800_3755781_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|3756047_3756857_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|3756896_3757577_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|3757570_3758029_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|3758040_3758403_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|3758485_3759169_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|3759224_3759533_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|3759551_3759866_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|3759862_3762337_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|3762344_3763736_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|3763732_3763918_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|3763896_3764598_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|3764594_3765416_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|3765396_3766521_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|3766513_3767533_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_024000452.1|3767738_3768773_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|3768873_3769665_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|3769747_3770122_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|3770099_3771509_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|3771501_3772884_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|3773218_3774823_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077274089.1|3774858_3775872_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|3775882_3776809_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|3777199_3778150_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|3778319_3779546_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|3779745_3780612_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|3780604_3781567_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|3781667_3782618_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3782716_3783667_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|3783765_3784716_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|3784712_3786206_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|3786202_3789310_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|3789306_3792375_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|3792371_3793622_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|3793802_3794564_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|3794596_3795247_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|3795249_3796089_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|3796329_3797073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|3797155_3797503_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|3797600_3798443_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|3798487_3799375_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|3799401_3799590_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|3799687_3801145_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_019249116.1|3801131_3802658_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|3802676_3803144_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|3803143_3804166_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|3804286_3805027_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|3805081_3806182_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|3806183_3807374_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|3807493_3808510_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|3808828_3809500_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|3809496_3810405_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|3810616_3811264_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|3815115_3816192_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|3816202_3817012_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|3817101_3817875_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023996063.1|3817894_3818071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|3818057_3819008_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	3855028	3925064	4147141	transposase,tRNA	Natrialba_phage(12.5%)	60	NA	NA
WP_010929569.1|3855028_3856948_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|3856944_3857637_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|3857633_3858431_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3858437_3859199_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|3859242_3860160_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_003806883.1|3861749_3862940_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|3863178_3863559_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|3863568_3864102_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|3864165_3864597_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|3864599_3865298_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|3865540_3866065_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|3866146_3866530_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|3866689_3870802_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|3870801_3875046_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|3875154_3875559_-	lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|3875799_3876975_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|3879380_3880487_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|3881498_3882314_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|3882310_3883261_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|3883342_3883678_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|3883702_3884137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929579.1|3884169_3885396_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|3885392_3885890_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929581.1|3886097_3887006_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995008.1|3887191_3888034_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|3888076_3889498_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|3889653_3890604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|3890600_3891791_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814400.1|3891977_3892952_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|3892953_3895092_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|3895088_3895628_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|3895631_3896360_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|3896346_3897240_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|3897310_3897706_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|3897715_3898246_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|3898374_3898674_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|3898691_3899642_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815267.1|3900141_3900777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|3900748_3900985_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|3901112_3902006_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|3903175_3904423_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|3904419_3905034_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|3905169_3906120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|3906162_3907419_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|3908650_3909385_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|3909390_3909981_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|3910005_3910695_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|3910691_3911453_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|3911532_3912432_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|3912525_3913476_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|3914276_3915503_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|3915502_3915922_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|3916105_3917047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929598.1|3917470_3918307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929599.1|3918501_3919083_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248465.1|3919095_3919413_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|3919516_3920575_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|3920609_3921881_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|3922510_3923692_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|3924113_3925064_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	3932662	3991136	4147141	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|3932662_3933613_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|3933687_3934632_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|3934628_3936503_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|3937850_3938555_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|3938551_3939658_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|3939919_3940513_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|3940509_3941697_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|3941759_3943019_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|3943042_3944131_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|3944138_3945239_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|3945242_3945818_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|3945821_3946874_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|3947004_3948012_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|3948013_3949300_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|3949316_3949472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|3949496_3950300_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|3950296_3951163_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_076879533.1|3951231_3952368_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|3952367_3953207_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|3954139_3954742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|3954771_3955425_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|3955557_3956814_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_019248163.1|3956816_3957761_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|3957836_3958112_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|3958119_3958782_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|3958843_3959845_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|3959859_3960408_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|3960465_3961362_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|3961358_3962420_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|3962455_3963406_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|3964305_3965499_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|3965580_3966210_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|3966271_3966955_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|3966964_3968647_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|3968934_3969282_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|3969372_3969690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3969972_3970989_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|3971064_3971865_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|3971861_3972737_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|3972747_3974040_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|3974082_3975123_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|3975228_3976050_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|3976150_3977101_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|3977199_3978105_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|3978101_3978935_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|3979771_3980782_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|3980778_3981168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929638.1|3982061_3983315_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|3983405_3985106_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|3985532_3986180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|3986178_3987618_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|3987710_3988013_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|3988040_3988919_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3990185_3991136_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP015767	Bordetella pertussis strain VA-18, complete genome	4147141	4019921	4080432	4147141	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	52	NA	NA
WP_005015810.1|4019921_4020872_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|4022315_4023218_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|4023195_4023825_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|4024155_4025538_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|4025571_4026201_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|4026249_4027857_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|4027881_4028565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|4028646_4029123_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|4029163_4029343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|4029329_4030280_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|4031395_4031923_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|4032014_4032830_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|4032890_4033625_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|4033662_4035741_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|4035990_4036263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486043.1|4036361_4037450_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|4037453_4039358_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|4039354_4043029_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|4043089_4043653_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|4043660_4044083_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|4044110_4044530_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|4044558_4045005_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|4045131_4045629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|4045783_4048054_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|4048102_4049335_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|4049433_4050384_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|4050408_4051308_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|4051462_4052011_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|4052049_4052769_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929690.1|4052840_4055783_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033446404.1|4056376_4059172_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929692.1|4059629_4060562_+	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929693.1|4060673_4062023_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929694.1|4062054_4062780_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929695.1|4062830_4063682_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929696.1|4063811_4064498_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_003819086.1|4064497_4065142_+	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_003807674.1|4065198_4065474_+	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003807672.1|4065499_4065796_+	YciI family protein	NA	NA	NA	NA	NA
WP_003819081.1|4065796_4066621_+	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_010929698.1|4066617_4067667_+	cyclase	NA	NA	NA	NA	NA
WP_010929699.1|4067771_4068095_-	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010931070.1|4068251_4069202_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929680.1|4069815_4070784_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929679.1|4070812_4072024_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929678.1|4072093_4072834_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929677.1|4072978_4075843_-	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929676.1|4075902_4076277_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929675.1|4076358_4077459_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_019248671.1|4077853_4078747_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_076879535.1|4078743_4079436_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_005012067.1|4079481_4080432_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
