The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	0	2404	2027369		Yellowstone_lake_mimivirus(100.0%)	1	NA	NA
WP_080988005.1|1036_2404_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	28.7	1.5e-25
>prophage 2
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	10337	11882	2027369		Acidithiobacillus_phage(100.0%)	1	NA	NA
WP_065523823.1|10337_11882_+	DNA (cytosine-5-)-methyltransferase	NA	K4HZD0	Acidithiobacillus_phage	27.8	3.4e-37
>prophage 3
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	15281	15803	2027369		Acidithiobacillus_phage(100.0%)	1	NA	NA
WP_065523818.1|15281_15803_-	helix-turn-helix domain-containing protein	NA	K4ICM4	Acidithiobacillus_phage	46.0	4.0e-11
>prophage 4
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	21164	27439	2027369		Planktothrix_phage(40.0%)	5	NA	NA
WP_065523814.1|21164_23120_+	DNA helicase RecQ	NA	J2YAJ8	Acanthamoeba_polyphaga_lentillevirus	32.0	3.2e-69
WP_065523813.1|23505_24525_+	pyridoxal-phosphate dependent enzyme	NA	A0A1X9I5K7	Streptococcus_phage	38.3	7.1e-52
WP_052826761.1|24596_25772_+	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	28.0	2.2e-25
WP_065523812.1|25860_26649_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.5	3.5e-22
WP_065523811.1|26641_27439_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.9	1.5e-20
>prophage 5
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	33185	35078	2027369		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_065524035.1|33185_35078_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.4	3.8e-99
>prophage 6
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	38963	39818	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_052824792.1|38963_39818_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.2	4.0e-32
>prophage 7
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	43485	48227	2027369		Staphylococcus_phage(66.67%)	4	NA	NA
WP_014697433.1|43485_43977_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	51.4	2.4e-29
WP_052824794.1|44384_45746_-	CHAP domain-containing protein	NA	A0A220BYJ8	Staphylococcus_phage	43.5	1.4e-10
WP_014697431.1|45971_46895_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_052824795.1|46898_48227_-	cell division ATP-binding protein FtsE	NA	A0A076FI99	Aureococcus_anophage	29.2	5.0e-13
>prophage 8
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	54938	57020	2027369		Cafeteria_roenbergensis_virus(100.0%)	1	NA	NA
WP_052826202.1|54938_57020_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.3	3.7e-87
>prophage 9
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	60601	65416	2027369		Emiliania_huxleyi_virus(33.33%)	4	NA	NA
WP_065523801.1|60601_62071_-	AAA family ATPase	NA	G3GP48	Emiliania_huxleyi_virus	37.2	8.1e-57
WP_014697418.1|62111_62960_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_052824800.1|63032_63686_-	oligoribonuclease	NA	A0A1B3B0T8	Gordonia_phage	32.4	9.5e-18
WP_041776967.1|63880_65416_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	2.9e-97
>prophage 10
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	68860	69958	2027369		Pseudomonas_phage(100.0%)	1	NA	NA
WP_065523799.1|68860_69958_-	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	37.0	9.1e-05
>prophage 11
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	75121	76522	2027369		Moumouvirus(100.0%)	1	NA	NA
WP_084079608.1|75121_76522_-	carboxylesterase family protein	NA	M1PNU1	Moumouvirus	36.5	1.6e-30
>prophage 12
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	93977	101687	2027369		Caulobacter_phage(25.0%)	7	NA	NA
WP_065523794.1|93977_94406_-	peptide deformylase	NA	A0A067XQZ3	Caulobacter_phage	40.4	2.4e-09
WP_014697392.1|94573_96250_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	28.4	7.6e-43
WP_065523793.1|96494_97400_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
WP_014697390.1|97460_98078_-	DUF3180 domain-containing protein	NA	NA	NA	NA	NA
WP_065523792.1|98074_98944_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_014697388.1|99030_101127_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	C7U047	Ostreococcus_tauri_virus	45.6	1.6e-106
WP_014697387.1|101123_101687_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	30.1	7.0e-09
>prophage 13
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	106067	106940	2027369		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_052831435.1|106067_106940_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.4	8.5e-22
>prophage 14
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	123064	126268	2027369		Herpes_simplex_virus(100.0%)	1	NA	NA
WP_065523787.1|123064_126268_-	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	31.2	3.7e-131
>prophage 15
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	148729	156290	2027369		Tupanvirus(20.0%)	8	NA	NA
WP_052824834.1|148729_149740_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	37.6	2.1e-48
WP_052824835.1|149838_150375_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_052824836.1|150409_151093_-	dihydrofolate reductase	NA	U5J9P6	Bacillus_phage	36.5	3.5e-23
WP_014697356.1|151218_152091_-	thymidylate synthase	NA	A0A2R4A1R4	Microbacterium_phage	67.4	1.2e-105
WP_052824837.1|152224_152638_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_014697354.1|152744_153782_-	universal stress protein	NA	NA	NA	NA	NA
WP_065523774.1|154236_155046_-	C40 family peptidase	NA	D2KRB9	Lactobacillus_phage	34.9	1.5e-09
WP_041776959.1|155264_156290_-	CHAP domain-containing protein	NA	A0A076G4W5	Staphylococcus_phage	37.7	6.1e-11
>prophage 16
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	173400	174759	2027369		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
WP_065523768.1|173400_174759_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	33.6	5.5e-68
>prophage 17
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	180880	182545	2027369	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_041776957.1|180880_182545_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	33.8	5.3e-73
>prophage 18
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	198094	201634	2027369	tRNA	Tupanvirus(50.0%)	2	NA	NA
WP_014697320.1|198094_199381_+|tRNA	serine--tRNA ligase	tRNA	A0A2K9L088	Tupanvirus	33.8	9.9e-59
WP_065523761.1|200659_201634_+	ribonuclease HI	NA	Q2Z0V7	Pseudomonas_phage	36.8	4.6e-16
>prophage 19
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	208238	211073	2027369		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_014697312.1|208238_211073_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	22.6	3.4e-19
>prophage 20
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	246684	248385	2027369		Streptococcus_phage(100.0%)	2	NA	NA
WP_052826661.1|246684_247320_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	40.5	1.5e-20
WP_065523748.1|247377_248385_-	D-2-hydroxyacid dehydrogenase family protein	NA	M1NSB9	Streptococcus_phage	28.5	5.1e-18
>prophage 21
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	258924	259221	2027369		uncultured_virus(100.0%)	1	NA	NA
WP_014697286.1|258924_259221_-	co-chaperone GroES	NA	A0A221S308	uncultured_virus	46.9	3.5e-20
>prophage 22
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	271828	274364	2027369		Moraxella_phage(50.0%)	2	NA	NA
WP_065523741.1|271828_273223_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	28.6	3.3e-36
WP_065523740.1|273584_274364_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	34.1	4.1e-15
>prophage 23
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	277854	278634	2027369		Bacillus_phage(100.0%)	1	NA	NA
WP_014697266.1|277854_278634_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.5	1.2e-14
>prophage 24
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	281847	291058	2027369		Bacillus_phage(33.33%)	7	NA	NA
WP_065523737.1|281847_282555_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.9	6.4e-36
WP_014697261.1|282551_283775_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	29.3	3.6e-26
WP_052824893.1|283806_284499_-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_080988022.1|284577_285825_-	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	49.2	4.6e-85
WP_065523736.1|285897_287901_-	acetyltransferase	NA	A0A193GZ69	Enterobacter_phage	33.0	4.0e-22
WP_065523735.1|288115_289246_-	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	44.8	2.0e-79
WP_065523734.1|289717_291058_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	30.5	1.2e-59
>prophage 25
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	296179	303059	2027369		Phage_TP(20.0%)	6	NA	NA
WP_052825735.1|296179_297715_-	U32 family peptidase	NA	Q6DW11	Phage_TP	35.8	1.1e-37
WP_065523732.1|298058_298922_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_052831322.1|299230_299494_+	NrdH-redoxin	NA	A0A0E3T8B5	Gordonia_phage	43.1	8.3e-13
WP_052824902.1|299490_299931_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	S5MA49	Bacillus_phage	35.7	7.6e-11
WP_084079617.1|299927_302054_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	47.5	4.9e-188
WP_014697247.1|302093_303059_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N7CCA3	Skermania_phage	80.4	8.8e-145
>prophage 26
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	330479	334559	2027369		Synechococcus_phage(50.0%)	4	NA	NA
WP_052824962.1|330479_331472_-	transcription termination/antitermination factor NusG	NA	F5B3X4	Synechococcus_phage	29.8	1.8e-12
WP_004268431.1|331602_331833_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_052831304.1|332094_333312_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_014697232.1|333425_334559_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.6e-57
>prophage 27
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	345551	346541	2027369		Pithovirus(100.0%)	1	NA	NA
WP_052831299.1|345551_346541_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	33.3	1.4e-15
>prophage 28
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	355465	382081	2027369	tRNA	Tupanvirus(27.27%)	20	NA	NA
WP_052831291.1|355465_356185_-	non-canonical purine NTP pyrophosphatase	NA	D2KCJ6	Cassava_brown_streak_virus	27.8	4.9e-07
WP_052825012.1|356213_356954_-	ribonuclease PH	NA	NA	NA	NA	NA
WP_052831289.1|357496_358117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052831287.1|358900_360223_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	34.5	5.0e-50
WP_052825014.1|360301_361309_+	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
WP_004268388.1|361430_361724_-	DUF3039 domain-containing protein	NA	A0A2R4A1S7	Microbacterium_phage	44.6	3.0e-11
WP_052831285.1|361899_362379_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	36.0	3.7e-19
WP_052825015.1|362429_363131_+	cell division protein	NA	NA	NA	NA	NA
WP_052825016.1|363237_363834_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_004268380.1|363912_364107_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_014697211.1|364362_365139_+	ribonuclease III	NA	A0A1V0SDK0	Indivirus	30.0	1.6e-16
WP_052826156.1|365482_367465_+	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.9	1.9e-56
WP_004268377.1|367480_368035_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_014697209.1|368191_368929_+	type 1 glutamine amidotransferase	NA	A0A2K9L2L9	Tupanvirus	30.7	1.9e-06
WP_065523727.1|369064_371266_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	21.3	3.7e-29
WP_065523726.1|371542_373180_+|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	32.2	1.3e-39
WP_065523725.1|374111_375755_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_052826151.1|375871_376777_+	cation transporter	NA	M1Q1N9	Streptococcus_phage	36.9	2.3e-46
WP_065523724.1|377276_378446_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_065523723.1|378622_382081_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	29.3	7.3e-117
>prophage 29
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	396681	397929	2027369	transposase	Staphylococcus_prophage(100.0%)	1	NA	NA
WP_065523454.1|396681_397929_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.5	6.4e-39
>prophage 30
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	454327	461376	2027369		Streptococcus_phage(33.33%)	4	NA	NA
WP_052831226.1|454327_454948_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	41.6	2.0e-33
WP_065523702.1|455298_458271_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	33.8	3.1e-95
WP_065523701.1|458730_459897_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_004219311.1|460233_461376_-	inositol-3-phosphate synthase	NA	A0A067XQY1	Caulobacter_phage	42.0	2.2e-70
>prophage 31
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	470991	473544	2027369		Bacteriophage(100.0%)	1	NA	NA
WP_065523698.1|470991_473544_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	33.2	2.7e-44
>prophage 32
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	486486	498627	2027369		Ostreococcus_lucimarinus_virus(25.0%)	9	NA	NA
WP_065523695.1|486486_488637_-	AarF/ABC1/UbiB kinase family protein	NA	M4R0M8	Ostreococcus_lucimarinus_virus	28.4	2.2e-39
WP_065523694.1|488745_489093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065523693.1|489200_489950_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_065523692.1|490013_491516_-	Mur ligase family protein	NA	NA	NA	NA	NA
WP_014697132.1|491612_492992_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	38.5	9.2e-79
WP_065523691.1|493169_494996_-	protein-PII uridylyltransferase	NA	NA	NA	NA	NA
WP_052831198.1|495330_495669_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_065523690.1|495670_496966_-	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	30.2	3.8e-34
WP_065523689.1|497226_498627_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	33.8	2.0e-12
>prophage 33
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	506000	507488	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_065523686.1|506000_507488_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.8	2.7e-15
>prophage 34
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	517863	518601	2027369		Bacillus_virus(100.0%)	1	NA	NA
WP_065523679.1|517863_518601_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.0	9.1e-25
>prophage 35
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	524836	526899	2027369		Planktothrix_phage(50.0%)	4	NA	NA
WP_065523675.1|524836_525520_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.6	3.9e-22
WP_154701386.1|525522_525678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_143432915.1|525840_526110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084079619.1|526155_526899_-	hypothetical protein	NA	F0PIJ7	Enterococcus_phage	34.0	2.5e-22
>prophage 36
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	530469	534296	2027369		Bacillus_phage(100.0%)	2	NA	NA
WP_052826082.1|530469_532317_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.4	3.3e-47
WP_065523671.1|532376_534296_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.2	3.2e-29
>prophage 37
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	542967	543669	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_014697093.1|542967_543669_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.6	6.6e-33
>prophage 38
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	546683	547442	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_065523667.1|546683_547442_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	29.8	1.8e-12
>prophage 39
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	554331	555714	2027369		Pandoravirus(100.0%)	1	NA	NA
WP_065523664.1|554331_555714_-	beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	33.9	1.6e-62
>prophage 40
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	568356	569178	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_084079621.1|568356_569178_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.3	1.6e-30
>prophage 41
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	589602	590889	2027369		Cedratvirus(100.0%)	1	NA	NA
WP_014697062.1|589602_590889_-	adenylosuccinate synthase	NA	A0A285PX35	Cedratvirus	35.9	6.2e-69
>prophage 42
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	595548	596028	2027369		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_065523644.1|595548_596028_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	54.4	4.7e-22
>prophage 43
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	599208	600441	2027369		Streptococcus_phage(100.0%)	1	NA	NA
WP_084079624.1|599208_600441_+	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	34.5	3.0e-49
>prophage 44
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	608350	615310	2027369	tRNA,protease	uncultured_Mediterranean_phage(66.67%)	4	NA	NA
WP_065523636.1|608350_609688_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	32.7	9.0e-55
WP_065523635.1|610156_610771_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_065523634.1|610945_612799_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.1	1.4e-21
WP_065523633.1|613093_615310_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	25.6	3.9e-39
>prophage 45
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	633426	637620	2027369		Cannes_8_virus(33.33%)	3	NA	NA
WP_014697022.1|633426_634452_+	serine/threonine protein kinase	NA	T2AWK4	Cannes_8_virus	31.0	5.2e-18
WP_014697021.1|634444_636568_+	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	L7RGQ5	Acanthamoeba_polyphaga_moumouvirus	31.5	1.1e-17
WP_065523624.1|636972_637620_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	40.9	1.6e-36
>prophage 46
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	644612	647069	2027369		Iris_mild_mosaic_virus(100.0%)	1	NA	NA
WP_065523621.1|644612_647069_-	glycogen/starch/alpha-glucan phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	40.2	1.0e-11
>prophage 47
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	655250	656114	2027369		Staphylococcus_phage(100.0%)	1	NA	NA
WP_065523619.1|655250_656114_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.1	3.0e-51
>prophage 48
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	662380	672414	2027369		Enterobacteria_phage(50.0%)	10	NA	NA
WP_004219334.1|662380_663415_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.0	1.0e-18
WP_052824341.1|663409_663751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080987963.1|663993_664779_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.7	3.1e-15
WP_065523617.1|664884_666084_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_065524013.1|666315_667488_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_065523616.1|667517_669074_+	sugar ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	28.1	1.9e-11
WP_014697000.1|669070_670312_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_052831049.1|670490_670721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052824338.1|670880_671228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041777072.1|671301_672414_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	30.5	1.0e-35
>prophage 49
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	675569	678886	2027369		Infectious_laryngotracheitis_virus(50.0%)	2	NA	NA
WP_014696993.1|675569_676382_+	aminoglycoside 3'-phosphotransferase	NA	A0A193CJY5	Infectious_laryngotracheitis_virus	30.3	3.1e-10
WP_052831045.1|677716_678886_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	22.4	3.8e-09
>prophage 50
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	696696	699198	2027369		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_065523600.1|696696_699198_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	35.5	1.2e-116
>prophage 51
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	712382	720624	2027369		Bacillus_virus(66.67%)	5	NA	NA
WP_052825899.1|712382_715145_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	31.5	2.2e-103
WP_065523595.1|715213_717331_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	41.8	5.1e-121
WP_014696946.1|717521_718025_-	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_065523594.1|718021_719449_-	DNA replication and repair protein RecF	NA	NA	NA	NA	NA
WP_004219018.1|719499_720624_-	DNA polymerase III subunit beta	NA	A0A286N3D1	Arthrobacter_phage	30.4	3.1e-40
>prophage 52
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	723823	724141	2027369		Staphylococcus_phage(100.0%)	1	NA	NA
WP_080571647.1|723823_724141_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	43.3	7.9e-10
>prophage 53
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	727645	731294	2027369		Natrialba_phage(33.33%)	3	NA	NA
WP_052824311.1|727645_728620_+	ParA family protein	NA	Q8JL10	Natrialba_phage	37.2	2.3e-23
WP_065523589.1|728619_730008_+	ParB/RepB/Spo0J family partition protein	NA	S5VSZ7	Leptospira_phage	30.3	5.5e-07
WP_065523588.1|730331_731294_-	thioredoxin-disulfide reductase	NA	A0A1V0SIN1	Klosneuvirus	47.8	9.3e-70
>prophage 54
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	738998	740417	2027369	tRNA	Mycobacterium_phage(100.0%)	1	NA	NA
WP_052824306.1|738998_740417_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A249XS88	Mycobacterium_phage	33.8	1.3e-48
>prophage 55
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	743430	760143	2027369		Streptomyces_phage(14.29%)	10	NA	NA
WP_065523584.1|743430_744978_-	DUF348 domain-containing protein	NA	A0A2L1IVL5	Streptomyces_phage	55.1	3.5e-18
WP_052824302.1|745648_746680_-	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_065523583.1|747017_749114_-	serine/threonine protein kinase	NA	M1GWK1	Acanthocystis_turfacea_Chlorella_virus	30.3	6.6e-12
WP_014698352.1|749182_750241_-	potassium transporter Kef	NA	A0A1B0Y2S3	Lactobacillus_phage	27.7	2.1e-06
WP_004218984.1|750602_751736_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	33.8	2.9e-22
WP_065523582.1|751945_753394_+	DUF4032 domain-containing protein	NA	NA	NA	NA	NA
WP_065523581.1|753533_754919_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	41.0	4.3e-84
WP_052825872.1|755031_756027_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_052824300.1|756342_759333_+	cation-translocating P-type ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	27.8	8.4e-77
WP_004218977.1|759561_760143_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	64.9	1.5e-70
>prophage 56
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	781227	781983	2027369		Bacillus_phage(100.0%)	1	NA	NA
WP_065523571.1|781227_781983_-	NAD-dependent deacetylase	NA	S5M4R0	Bacillus_phage	26.6	1.2e-19
>prophage 57
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	829514	833252	2027369		Micromonas_pusilla_virus(50.0%)	3	NA	NA
WP_014698306.1|829514_831380_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	45.7	2.4e-138
WP_065523558.1|831379_832069_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_052825196.1|832199_833252_+	DnaJ domain-containing protein	NA	M1PHB4	Moumouvirus	48.4	2.2e-08
>prophage 58
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	844009	848302	2027369	tRNA	Streptococcus_phage(50.0%)	4	NA	NA
WP_014698293.1|844009_844957_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	35.7	7.1e-38
WP_052825243.1|844991_845438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014698291.1|845487_846171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065523553.1|846430_848302_+|tRNA	methionine--tRNA ligase	tRNA	A0A2K9KZR3	Tupanvirus	30.9	5.4e-66
>prophage 59
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	857224	859417	2027369		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_014698285.1|857224_859417_+	KUP/HAK/KT family potassium transporter	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	34.1	1.3e-63
>prophage 60
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	873095	874457	2027369		Staphylococcus_phage(100.0%)	1	NA	NA
WP_014698274.1|873095_874457_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.4	9.9e-09
>prophage 61
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	883836	886327	2027369		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_065524007.1|883836_884922_-	glycosyltransferase	NA	F2Y1U7	Organic_Lake_phycodnavirus	29.9	4.6e-09
WP_065523541.1|885142_886327_+	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	43.4	5.8e-90
>prophage 62
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	898021	900186	2027369		Klosneuvirus(50.0%)	3	NA	NA
WP_004269239.1|898021_899035_-	ribose-phosphate diphosphokinase	NA	A0A1V0SKK7	Klosneuvirus	31.7	3.1e-39
WP_004219090.1|899228_899516_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_052825132.1|899553_900186_+	single-stranded DNA-binding protein	NA	A0A2P1CIB0	Actinomyces_phage	62.6	1.7e-35
>prophage 63
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	909142	909733	2027369		Mycobacterium_phage(100.0%)	1	NA	NA
WP_065523527.1|909142_909733_+	ParA family protein	NA	W0LIU2	Mycobacterium_phage	34.0	2.1e-24
>prophage 64
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	914241	916986	2027369	transposase	Clostridium_botulinum_C_phage(66.67%)	3	NA	NA
WP_026643756.1|914241_914874_+|transposase	IS607 family transposase	transposase	Q331V0	Clostridium_botulinum_C_phage	49.5	5.0e-56
WP_065523520.1|914827_915949_+|transposase	transposase	transposase	Q331V1	Clostridium_botulinum_C_phage	38.6	1.3e-62
WP_065523519.1|916116_916986_-	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	29.3	6.7e-27
>prophage 65
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	937843	942342	2027369	integrase	Mycobacterium_phage(50.0%)	5	931021:931035	951184:951198
931021:931035	attL	CGATCGTGTCGAGCA	NA	NA	NA	NA
WP_084079638.1|937843_938734_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F2H8	Mycobacterium_phage	33.6	3.4e-26
WP_143432901.1|939274_939469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089369385.1|939586_940270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014698255.1|941092_941452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052832512.1|941607_942342_+	aquaporin family protein	NA	M1HJ77	Paramecium_bursaria_Chlorella_virus	30.9	1.3e-23
951184:951198	attR	TGCTCGACACGATCG	NA	NA	NA	NA
>prophage 66
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	946645	949333	2027369		Cronobacter_phage(100.0%)	1	NA	NA
WP_065523493.1|946645_949333_+	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	37.1	2.2e-121
>prophage 67
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	952729	953689	2027369		Staphylococcus_phage(100.0%)	1	NA	NA
WP_084079718.1|952729_953689_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.4	1.5e-24
>prophage 68
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	967202	975312	2027369	tRNA	Tupanvirus(33.33%)	7	NA	NA
WP_052825147.1|967202_969995_-|tRNA	valine--tRNA ligase	tRNA	A0A2K9KZB8	Tupanvirus	38.3	3.0e-161
WP_065523487.1|970059_971595_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_154701389.1|971587_971764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065524002.1|971943_972687_-	endonuclease III	NA	NA	NA	NA	NA
WP_052825149.1|972766_973516_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	32.3	6.2e-13
WP_065523486.1|973823_974672_+	transporter	NA	NA	NA	NA	NA
WP_014698224.1|974802_975312_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	45.9	1.1e-29
>prophage 69
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1028816	1029785	2027369		Vibrio_phage(100.0%)	1	NA	NA
WP_065523466.1|1028816_1029785_+	type I-E CRISPR-associated endonuclease Cas1	NA	A0A2D0YZM7	Vibrio_phage	20.1	1.2e-08
>prophage 70
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1049485	1057154	2027369		Catovirus(33.33%)	3	NA	NA
WP_052826216.1|1049485_1051306_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.5	2.0e-44
WP_065523456.1|1051559_1055195_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	23.0	1.0e-20
WP_065523452.1|1055261_1057154_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.0	8.4e-99
>prophage 71
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1063798	1069750	2027369	transposase	Staphylococcus_prophage(50.0%)	4	NA	NA
WP_065523454.1|1063798_1065046_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.5	6.4e-39
WP_080989410.1|1065164_1066430_-	acyltransferase	NA	NA	NA	NA	NA
WP_065523453.1|1066676_1067813_+|transposase	IS1249 family transposase	transposase	NA	NA	NA	NA
WP_065523452.1|1067857_1069750_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.0	8.4e-99
>prophage 72
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1086880	1087822	2027369		Dishui_lake_phycodnavirus(100.0%)	1	NA	NA
WP_080989415.1|1086880_1087822_+	hypothetical protein	NA	A0A2N9QVY2	Dishui_lake_phycodnavirus	29.0	6.0e-05
>prophage 73
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1105059	1106118	2027369		Enterobacteria_phage(100.0%)	1	NA	NA
WP_080989395.1|1105059_1106118_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.1	1.6e-22
>prophage 74
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1112542	1113790	2027369		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_052826468.1|1112542_1113790_+	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	49.8	7.2e-99
>prophage 75
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1116973	1118032	2027369		Enterobacteria_phage(100.0%)	1	NA	NA
WP_052826482.1|1116973_1118032_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.1	6.8e-74
>prophage 76
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1122841	1124562	2027369		Lactobacillus_phage(50.0%)	2	NA	NA
WP_065523441.1|1122841_1123894_-	DUF348 domain-containing protein	NA	D6PSZ3	Lactobacillus_phage	49.0	2.0e-17
WP_052826461.1|1124166_1124562_-	thioredoxin	NA	G5CQP2	Megavirus	29.0	2.4e-08
>prophage 77
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1152662	1160321	2027369		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_004218271.1|1152662_1156223_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	22.4	1.2e-32
WP_052832300.1|1156283_1160321_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	27.8	2.1e-62
>prophage 78
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1172787	1174191	2027369		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_084079643.1|1172787_1174191_-	serine/threonine protein kinase	NA	A0A1B1IUU3	uncultured_Mediterranean_phage	32.1	4.6e-17
>prophage 79
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1189568	1192193	2027369		Acinetobacter_phage(100.0%)	1	NA	NA
WP_052825274.1|1189568_1192193_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	28.6	2.4e-43
>prophage 80
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1197943	1198477	2027369		Burkholderia_phage(100.0%)	1	NA	NA
WP_052825271.1|1197943_1198477_+	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	50.0	2.0e-29
>prophage 81
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1202216	1207307	2027369		Enterococcus_phage(66.67%)	3	NA	NA
WP_052825268.1|1202216_1203515_-	exodeoxyribonuclease VII large subunit	NA	A0A160DF99	Gordonia_phage	42.2	6.5e-58
WP_052825267.1|1203871_1206298_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	51.0	5.7e-217
WP_080988501.1|1206575_1207307_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	49.4	1.9e-43
>prophage 82
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1216388	1222981	2027369		Megavirus(33.33%)	5	NA	NA
WP_052825262.1|1216388_1217429_+	Zn-dependent alcohol dehydrogenase	NA	K7Z7U2	Megavirus	24.9	7.1e-07
WP_014698100.1|1217594_1218167_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_052832255.1|1218381_1218954_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_084079649.1|1218950_1220891_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.6	1.8e-40
WP_084079650.1|1220887_1222981_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.1	3.3e-19
>prophage 83
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1226861	1230182	2027369	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_089369384.1|1226861_1230182_+|tRNA	mupirocin-resistant isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	33.7	7.0e-165
>prophage 84
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1246043	1247987	2027369		Streptococcus_phage(100.0%)	1	NA	NA
WP_084079658.1|1246043_1247987_+	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	NA	D0R0F5	Streptococcus_phage	27.9	4.6e-60
>prophage 85
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1255452	1256019	2027369		Clostridium_phage(100.0%)	1	NA	NA
WP_014698076.1|1255452_1256019_-	3'-5' exonuclease	NA	A0A0A7RWA3	Clostridium_phage	34.8	3.6e-21
>prophage 86
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1259362	1260547	2027369		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_052832049.1|1259362_1260547_+	ATP-binding cassette domain-containing protein	NA	F2Y165	Organic_Lake_phycodnavirus	24.2	1.4e-06
>prophage 87
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1264107	1265001	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_052824156.1|1264107_1265001_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	1.2e-26
>prophage 88
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1273767	1275357	2027369		Bacillus_virus(100.0%)	1	NA	NA
WP_084079662.1|1273767_1275357_+	ATP-dependent helicase	NA	G3MA40	Bacillus_virus	24.9	1.8e-33
>prophage 89
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1286328	1287120	2027369		Flavobacterium_phage(100.0%)	1	NA	NA
WP_014698047.1|1286328_1287120_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	36.7	5.7e-17
>prophage 90
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1299907	1301383	2027369	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_084079671.1|1299907_1301383_+|tRNA	glycine--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	29.5	6.7e-43
>prophage 91
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1308768	1312335	2027369		Streptomyces_phage(100.0%)	1	NA	NA
WP_052824178.1|1308768_1312335_+	DNA polymerase III subunit alpha	NA	A0A0K1Y9G6	Streptomyces_phage	50.3	0.0e+00
>prophage 92
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1321163	1325210	2027369		Catovirus(100.0%)	1	NA	NA
WP_084079677.1|1321163_1325210_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	28.6	1.3e-51
>prophage 93
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1330092	1333072	2027369		Lactococcus_phage(50.0%)	4	NA	NA
WP_014698013.1|1330092_1330788_-	transcriptional repressor LexA	NA	Q9G0C2	Lactococcus_phage	34.3	1.8e-14
WP_014698012.1|1330844_1331276_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_004218632.1|1331367_1331814_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_041777148.1|1331869_1333072_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	43.1	4.8e-92
>prophage 94
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1354557	1356291	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_084079683.1|1354557_1356291_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	4.6e-19
>prophage 95
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1376717	1377461	2027369		Rhizobium_phage(100.0%)	1	NA	NA
WP_004218690.1|1376717_1377461_+	sigma-70 family RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	26.5	2.1e-05
>prophage 96
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1383771	1388402	2027369		Agrobacterium_phage(25.0%)	6	NA	NA
WP_004218697.1|1383771_1384446_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.1	5.2e-11
WP_004218698.1|1384490_1384682_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_004218699.1|1384731_1385115_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_084079692.1|1385507_1386431_+	site-specific tyrosine recombinase XerD	NA	S5M872	Bacillus_phage	23.1	2.4e-14
WP_004218702.1|1386544_1387384_+	ParA family protein	NA	Q8JL10	Natrialba_phage	31.5	6.1e-25
WP_084079693.1|1387592_1388402_+	NUDIX hydrolase	NA	A0A0E3JJF3	Streptomyces_phage	36.0	7.0e-10
>prophage 97
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1398321	1400302	2027369		Planktothrix_phage(50.0%)	2	NA	NA
WP_052831903.1|1398321_1399128_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	2.6e-33
WP_065523994.1|1399366_1400302_+	tyrosine recombinase XerC	NA	A0A1B3AZY4	Gordonia_phage	30.5	4.7e-18
>prophage 98
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1404473	1406462	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_143432894.1|1404473_1406462_+	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	8.2e-20
>prophage 99
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1410276	1415123	2027369		Erysipelothrix_phage(50.0%)	3	NA	NA
WP_065523987.1|1410276_1411587_+	class I SAM-dependent RNA methyltransferase	NA	A0A2K5B251	Erysipelothrix_phage	26.1	5.6e-25
WP_052825631.1|1411916_1412504_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_065523986.1|1412552_1415123_+	HAD-IC family P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	24.3	1.1e-35
>prophage 100
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1423245	1424235	2027369		Indivirus(100.0%)	1	NA	NA
WP_065523982.1|1423245_1424235_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.0	1.1e-12
>prophage 101
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1432682	1439302	2027369		Mycobacterium_phage(100.0%)	6	NA	NA
WP_065523976.1|1432682_1435385_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.9	2.3e-97
WP_052825642.1|1435500_1436154_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_065523975.1|1436335_1436956_+	CinA family protein	NA	NA	NA	NA	NA
WP_052825644.1|1436985_1437501_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_052831870.1|1437630_1437882_+	DUF3046 domain-containing protein	NA	NA	NA	NA	NA
WP_065523974.1|1438153_1439302_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	69.3	6.4e-126
>prophage 102
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1444663	1455603	2027369		Acinetobacter_phage(25.0%)	8	NA	NA
WP_065523972.1|1444663_1445716_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	33.1	2.6e-41
WP_014697929.1|1445807_1446374_-	membrane protein	NA	NA	NA	NA	NA
WP_014697928.1|1446423_1447164_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_065523971.1|1447261_1449487_-	serine/threonine-protein kinase	NA	G9BWE0	Planktothrix_phage	27.8	3.9e-18
WP_065523970.1|1449547_1450648_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_065523969.1|1450828_1451533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080987949.1|1451604_1453131_+	RNA polymerase sigma factor	NA	A0A2I7SAT0	Vibrio_phage	37.8	2.2e-41
WP_065523968.1|1453263_1455603_+	type IIA DNA topoisomerase subunit B	NA	G3M9Z3	Bacillus_virus	35.3	4.5e-110
>prophage 103
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1465413	1468089	2027369		Bacillus_virus(100.0%)	1	NA	NA
WP_065523962.1|1465413_1468089_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	33.6	7.3e-72
>prophage 104
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1471227	1484212	2027369		Streptomyces_phage(16.67%)	10	NA	NA
WP_065524055.1|1471227_1471698_+	dUTP diphosphatase	NA	A0A2L1IVN2	Streptomyces_phage	57.9	2.2e-32
WP_065523960.1|1471796_1474133_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1X9SH80	Bradyrhizobium_phage	36.8	5.9e-09
WP_014697912.1|1474224_1474764_-	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	41.6	4.9e-20
WP_014697911.1|1474978_1475977_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_052831849.1|1476162_1477458_+	methionine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	4.7e-24
WP_014697909.1|1477457_1478168_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_052824259.1|1478273_1479437_+	amidohydrolase	NA	NA	NA	NA	NA
WP_065523959.1|1479657_1481358_+	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	35.4	6.4e-90
WP_014697906.1|1481406_1481607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065523958.1|1481833_1484212_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	39.3	3.7e-152
>prophage 105
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1489646	1496406	2027369	protease	Agrobacterium_phage(40.0%)	6	NA	NA
WP_035136458.1|1489646_1490234_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	49.4	5.0e-42
WP_052824263.1|1490236_1490938_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	42.6	1.9e-35
WP_052825657.1|1491039_1492368_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	49.0	5.9e-107
WP_052824265.1|1492817_1494038_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_065523956.1|1494123_1495524_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	36.1	2.9e-48
WP_014697895.1|1495602_1496406_+	TIGR00730 family Rossman fold protein	NA	A0A1D8KU27	Synechococcus_phage	38.5	3.3e-20
>prophage 106
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1504665	1509675	2027369		Pandoravirus(33.33%)	4	NA	NA
WP_065523952.1|1504665_1505988_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	A0A0B5JD48	Pandoravirus	24.1	2.4e-15
WP_065523951.1|1506224_1507772_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	27.9	8.3e-12
WP_065523950.1|1507771_1508575_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_084079721.1|1508760_1509675_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.8	2.2e-36
>prophage 107
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1521606	1530499	2027369		Enterobacteria_phage(25.0%)	5	NA	NA
WP_089369380.1|1521606_1522947_-	nitrate reductase	NA	Q9KX94	Enterobacteria_phage	40.8	1.5e-73
WP_014697872.1|1523152_1524271_-	putative sulfate exporter family transporter	NA	NA	NA	NA	NA
WP_065523947.1|1524493_1526434_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	27.2	6.1e-36
WP_052831814.1|1526682_1527492_-	SDR family NAD(P)-dependent oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	24.3	2.3e-05
WP_052825357.1|1527673_1530499_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.6	2.2e-82
>prophage 108
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1533787	1538704	2027369		Cyanophage(50.0%)	4	NA	NA
WP_041777018.1|1533787_1535245_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QGJ9	Cyanophage	32.0	4.0e-32
WP_052825360.1|1535323_1536115_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
WP_052825361.1|1536197_1537148_-	glucose-6-phosphate dehydrogenase assembly protein OpcA	NA	NA	NA	NA	NA
WP_052825362.1|1537144_1538704_-	glucose-6-phosphate dehydrogenase	NA	A0A1D8KHJ5	Synechococcus_phage	36.4	2.3e-78
>prophage 109
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1558645	1563053	2027369		Bacillus_virus(50.0%)	4	NA	NA
WP_052825374.1|1558645_1559344_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.0	9.8e-29
WP_065523938.1|1559516_1560482_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_052825376.1|1560574_1561483_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_014697843.1|1561760_1563053_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	55.3	1.1e-129
>prophage 110
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1571659	1573681	2027369		Mycobacterium_phage(50.0%)	2	NA	NA
WP_004217727.1|1571659_1571938_-	WhiB family transcriptional regulator	NA	A0A2P1N2X5	Mycobacterium_phage	45.1	1.3e-11
WP_052825380.1|1572031_1573681_-	hypothetical protein	NA	A0A0A0RUH6	Bacillus_phage	29.9	1.6e-16
>prophage 111
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1584908	1585628	2027369		Bacillus_phage(100.0%)	1	NA	NA
WP_052825387.1|1584908_1585628_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.5	1.1e-30
>prophage 112
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1590092	1591007	2027369		Planktothrix_phage(100.0%)	1	NA	NA
WP_048340837.1|1590092_1591007_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.9	1.7e-17
>prophage 113
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1597732	1598746	2027369		Cronobacter_phage(100.0%)	1	NA	NA
WP_052825394.1|1597732_1598746_+	TerC family protein	NA	K4F9T9	Cronobacter_phage	34.4	7.8e-35
>prophage 114
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1602315	1605198	2027369		Bacillus_phage(100.0%)	1	NA	NA
WP_065523924.1|1602315_1605198_+	DNA polymerase I	NA	A0A068EMS7	Bacillus_phage	31.8	2.5e-38
>prophage 115
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1618298	1619861	2027369		Hokovirus(100.0%)	1	NA	NA
WP_014697801.1|1618298_1619861_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	26.1	3.4e-13
>prophage 116
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1627677	1628556	2027369		Staphylococcus_phage(100.0%)	1	NA	NA
WP_065523918.1|1627677_1628556_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.0e-14
>prophage 117
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1635619	1649710	2027369	tRNA,holin	Enterobacteria_phage(25.0%)	13	NA	NA
WP_089369378.1|1635619_1637008_-	purine permease	NA	Q9KX94	Enterobacteria_phage	27.4	2.0e-25
WP_004217806.1|1637242_1637824_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_089369364.1|1637905_1640728_+	AAA family ATPase	NA	A7KV33	Bacillus_phage	38.5	4.7e-122
WP_004217809.1|1640958_1641579_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
WP_014697782.1|1641682_1642048_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_052825418.1|1642121_1642799_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_014697780.1|1642873_1643275_+	DUF948 domain-containing protein	NA	NA	NA	NA	NA
WP_052825419.1|1643274_1643511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052826265.1|1643564_1646264_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	30.9	7.9e-50
WP_052825421.1|1646263_1646755_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_065523915.1|1646756_1647938_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_052826317.1|1647989_1648475_-	permease	NA	NA	NA	NA	NA
WP_052826267.1|1648519_1649710_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	35.7	1.8e-43
>prophage 118
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1657266	1658952	2027369		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_041777007.1|1657266_1658952_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	48.5	2.4e-137
>prophage 119
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1664507	1672135	2027369		environmental_halophage(33.33%)	8	NA	NA
WP_052825429.1|1664507_1665779_+	SufS family cysteine desulfurase	NA	Q2XUY6	environmental_halophage	38.8	8.2e-82
WP_014697761.1|1665868_1666444_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_052831701.1|1666445_1667018_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_014697759.1|1667099_1668347_-	glucose-1-phosphate adenylyltransferase	NA	H9NC64	Sphingomonas_phage	25.0	2.0e-08
WP_014697758.1|1668537_1669410_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_014697757.1|1669695_1670493_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_004217848.1|1670584_1670920_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_065523912.1|1670974_1672135_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	46.3	1.5e-45
>prophage 120
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1675147	1677208	2027369		Catovirus(100.0%)	1	NA	NA
WP_052831696.1|1675147_1677208_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.9	2.5e-43
>prophage 121
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1685093	1686974	2027369		Tupanvirus(100.0%)	1	NA	NA
WP_014697742.1|1685093_1686974_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	41.0	6.8e-24
>prophage 122
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1697409	1698252	2027369		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_065523907.1|1697409_1698252_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.7	6.8e-08
>prophage 123
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1707260	1708274	2027369		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_065524047.1|1707260_1708274_+	aspartate carbamoyltransferase	NA	M1HQL8	Paramecium_bursaria_Chlorella_virus	45.8	3.4e-54
>prophage 124
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1720154	1734872	2027369		Bacillus_virus(25.0%)	11	NA	NA
WP_052831663.1|1720154_1721927_-	NAD(P)-binding protein	NA	G3MA85	Bacillus_virus	38.3	1.4e-50
WP_052824413.1|1721943_1722507_-	redoxin domain-containing protein	NA	NA	NA	NA	NA
WP_065523899.1|1722636_1724448_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_065523898.1|1724658_1725603_+	choloylglycine hydrolase family protein	NA	A0A2K9L5Y5	Tupanvirus	23.4	9.0e-09
WP_052831659.1|1725723_1726497_+	carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_084079698.1|1726548_1727619_+	cation transporter	NA	NA	NA	NA	NA
WP_065523896.1|1727728_1729330_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	28.0	8.0e-42
WP_014697700.1|1729319_1729949_-	esterase	NA	NA	NA	NA	NA
WP_041777001.1|1730005_1730533_-	DNA-deoxyinosine glycosylase	NA	NA	NA	NA	NA
WP_052831653.1|1730629_1731583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052831652.1|1731911_1734872_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	53.3	8.9e-297
>prophage 125
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1738384	1740428	2027369		Thermobifida_phage(50.0%)	2	NA	NA
WP_052824422.1|1738384_1739317_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.3	2.2e-07
WP_014697693.1|1739465_1740428_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	22.7	2.8e-05
>prophage 126
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1744015	1745695	2027369		Streptococcus_phage(100.0%)	1	NA	NA
WP_080988461.1|1744015_1745695_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	O34035	Streptococcus_phage	38.6	1.7e-05
>prophage 127
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1752876	1754025	2027369		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_052824970.1|1752876_1754025_+	molecular chaperone DnaJ	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	31.1	4.1e-24
>prophage 128
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1757977	1759690	2027369		Tupanvirus(100.0%)	1	NA	NA
WP_080988460.1|1757977_1759690_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	23.7	4.1e-20
>prophage 129
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1763497	1765576	2027369	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_052831636.1|1763497_1765576_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.9	6.8e-110
>prophage 130
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1770777	1772963	2027369		Bacillus_phage(50.0%)	3	NA	NA
WP_014697661.1|1770777_1771845_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	22.2	3.3e-07
WP_014697660.1|1771898_1772339_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_014697659.1|1772381_1772963_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.6	1.4e-20
>prophage 131
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1776443	1778093	2027369		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_052824441.1|1776443_1778093_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	43.5	3.3e-59
>prophage 132
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1782953	1792049	2027369		Klosneuvirus(33.33%)	8	NA	NA
WP_052824444.1|1782953_1784381_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A1V0SLA1	Klosneuvirus	35.3	3.5e-41
WP_052824445.1|1784517_1786455_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_052826542.1|1786544_1786862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065523889.1|1786990_1789480_+	DEAD/DEAH box helicase	NA	M1HM79	Paramecium_bursaria_Chlorella_virus	33.3	3.7e-62
WP_004217973.1|1789583_1789931_+	RNA polymerase-binding protein RbpA	NA	NA	NA	NA	NA
WP_014697648.1|1790018_1790738_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_014697647.1|1791285_1791663_-	CrcB family protein	NA	NA	NA	NA	NA
WP_014697646.1|1791671_1792049_-	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	45.9	1.9e-10
>prophage 133
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1800482	1802567	2027369		Acinetobacter_phage(100.0%)	1	NA	NA
WP_065523888.1|1800482_1802567_-	bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta	NA	A0A0P0IR83	Acinetobacter_phage	36.5	2.9e-28
>prophage 134
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1809692	1810358	2027369		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_084079701.1|1809692_1810358_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	34.2	6.5e-22
>prophage 135
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1817540	1819616	2027369		Catovirus(100.0%)	1	NA	NA
WP_065523883.1|1817540_1819616_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	27.8	6.5e-52
>prophage 136
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1826841	1827885	2027369	tRNA	Moraxella_phage(100.0%)	1	NA	NA
WP_052824463.1|1826841_1827885_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	39.0	4.9e-56
>prophage 137
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1833627	1836594	2027369	tRNA	Staphylococcus_phage(100.0%)	1	NA	NA
WP_065523877.1|1833627_1836594_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	40.9	1.3e-191
>prophage 138
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1844251	1848012	2027369		Hokovirus(33.33%)	4	NA	NA
WP_014697597.1|1844251_1845271_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	31.2	1.5e-41
WP_041776988.1|1845362_1846067_-	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	25.7	3.1e-14
WP_052831591.1|1846063_1846681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052824472.1|1846698_1848012_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	48.7	4.5e-91
>prophage 139
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1859467	1860790	2027369	tRNA	Cronobacter_phage(100.0%)	1	NA	NA
WP_052824476.1|1859467_1860790_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	38.7	5.7e-70
>prophage 140
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1866928	1868182	2027369		Klosneuvirus(100.0%)	1	NA	NA
WP_052824481.1|1866928_1868182_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.4	1.1e-19
>prophage 141
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1874968	1882229	2027369	tRNA	Tupanvirus(33.33%)	5	NA	NA
WP_014697574.1|1874968_1876036_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	33.1	8.3e-27
WP_084079705.1|1876114_1877020_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_052832055.1|1877455_1878835_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_052824483.1|1878871_1879591_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	36.3	4.3e-19
WP_052824484.1|1879673_1882229_-	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	27.2	3.4e-10
>prophage 142
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1889323	1890805	2027369		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_052824489.1|1889323_1890805_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.4	4.1e-40
>prophage 143
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1895570	1898162	2027369		Ralstonia_phage(100.0%)	1	NA	NA
WP_052831571.1|1895570_1898162_-	NAD-dependent DNA ligase LigA	NA	A0A0A8J9A9	Ralstonia_phage	39.1	6.0e-79
>prophage 144
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1907829	1911324	2027369		Indivirus(50.0%)	2	NA	NA
WP_065523870.1|1907829_1910127_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	23.6	1.7e-08
WP_065523869.1|1910487_1911324_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.8	9.6e-55
>prophage 145
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1916438	1924082	2027369		Catovirus(33.33%)	4	NA	NA
WP_065523866.1|1916438_1918328_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	26.5	2.6e-55
WP_065523865.1|1918404_1919907_-	MFS transporter	NA	NA	NA	NA	NA
WP_065523864.1|1919848_1921363_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.9	8.8e-83
WP_065523863.1|1921493_1924082_+	DUF3516 domain-containing protein	NA	M1HM79	Paramecium_bursaria_Chlorella_virus	33.2	3.5e-47
>prophage 146
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1927882	1937563	2027369	tRNA,protease	Planktothrix_phage(33.33%)	6	NA	NA
WP_004218146.1|1927882_1928668_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	1.8e-31
WP_065523861.1|1928836_1929625_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_065523860.1|1929802_1931221_-	DUF349 domain-containing protein	NA	NA	NA	NA	NA
WP_041776979.1|1931353_1932754_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L0H9	Tupanvirus	29.1	6.1e-30
WP_014697533.1|1932812_1934615_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_065523859.1|1935010_1937563_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	37.8	1.6e-132
>prophage 147
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1941821	1949863	2027369		Hokovirus(20.0%)	8	NA	NA
WP_065523857.1|1941821_1943567_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	22.2	7.5e-09
WP_052824732.1|1943641_1944379_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.0	2.4e-33
WP_065523856.1|1944432_1945443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014697525.1|1945520_1945814_+	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_004218937.1|1945953_1947567_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	52.8	1.7e-148
WP_014697524.1|1947782_1947995_-	cold shock domain-containing protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	41.5	4.9e-08
WP_014697523.1|1948300_1948966_-	LytR C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_065523855.1|1949143_1949863_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	38.9	4.7e-34
>prophage 148
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1957202	1961699	2027369		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_065523849.1|1957202_1958648_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	38.1	3.4e-84
WP_052824741.1|1958746_1961251_+	flippase-like domain-containing protein	NA	NA	NA	NA	NA
WP_004218914.1|1961417_1961699_+	integration host factor	NA	A0A1P8CWT5	Bacillus_phage	43.2	1.7e-11
>prophage 149
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1966270	1978832	2027369	tRNA	Lymphocystis_disease_virus(20.0%)	10	NA	NA
WP_052824743.1|1966270_1967839_-	proteasome ATPase	NA	A0A1B2RW50	Lymphocystis_disease_virus	43.8	1.3e-31
WP_052832675.1|1967964_1968588_-	DedA family protein	NA	NA	NA	NA	NA
WP_052832673.1|1968697_1969399_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_065523847.1|1969498_1970464_-|tRNA	methionyl-tRNA formyltransferase	tRNA	Q58MV3	Prochlorococcus_phage	34.2	2.8e-05
WP_052824746.1|1970581_1972825_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_084079706.1|1972978_1974262_-	methyltransferase domain-containing protein	NA	A0A2K9L4K8	Tupanvirus	37.0	1.2e-40
WP_014697501.1|1974381_1975608_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	52.9	1.3e-111
WP_014697500.1|1975789_1976074_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_052832698.1|1976246_1978106_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_052832668.1|1978202_1978832_-	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	31.0	1.2e-20
>prophage 150
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1983199	1984435	2027369		Halovirus(100.0%)	1	NA	NA
WP_052824748.1|1983199_1984435_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	31.0	4.4e-40
>prophage 151
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1987578	1991085	2027369		Bodo_saltans_virus(50.0%)	2	NA	NA
WP_014697492.1|1987578_1988778_-	elongation factor Tu	NA	A0A2H4UVR3	Bodo_saltans_virus	24.2	3.5e-10
WP_014697491.1|1988955_1991085_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	26.9	3.8e-63
>prophage 152
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	1996946	2001543	2027369		Synechococcus_phage(50.0%)	2	NA	NA
WP_065523845.1|1996946_1997699_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	43.0	2.5e-46
WP_065523844.1|1997808_2001543_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	7.9e-32
>prophage 153
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	2010157	2014575	2027369		Streptococcus_phage(33.33%)	3	NA	NA
WP_065523835.1|2010157_2011654_-	type VI secretion protein ImpB	NA	M1Q231	Streptococcus_phage	28.1	1.0e-35
WP_014697480.1|2011888_2013445_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.5	7.7e-58
WP_065523834.1|2013540_2014575_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.1	2.2e-69
>prophage 154
NZ_CP015407	Bifidobacterium animalis subsp. animalis strain YL2, complete genome	2027369	2021900	2022398	2027369		Tetraselmis_virus(100.0%)	1	NA	NA
WP_014697473.1|2021900_2022398_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.4	1.1e-21
