The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP008886	Raoultella ornithinolytica strain A14 chromosome, complete genome	5398272	1694452	1757772	5398272	terminase,head,holin,coat,integrase,lysis,tRNA	Cronobacter_phage(27.78%)	78	1689348:1689365	1737444:1737461
1689348:1689365	attL	ATCGGCTGGGGCTGAAGA	NA	NA	NA	NA
WP_032695666.1|1694452_1695232_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_004860096.1|1695235_1696558_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_004860098.1|1696538_1697243_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_004860100.1|1697242_1701691_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_065906105.1|1701875_1703666_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_015584788.1|1703846_1704398_+	YcbK family protein	NA	NA	NA	NA	NA
WP_015584787.1|1704411_1705059_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	29.1	9.1e-21
WP_065906107.1|1705124_1706315_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_004860110.1|1706498_1707581_-	hypothetical protein	NA	Q1MVN1	Enterobacteria_phage	53.4	7.4e-100
WP_004860113.1|1708172_1709573_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	36.6	1.0e-80
WP_004860115.1|1709750_1710953_-	nicotinate phosphoribosyltransferase	NA	A0A2L0UZQ6	Agrobacterium_phage	30.6	1.2e-42
WP_065906109.1|1711212_1712502_-|integrase	site-specific integrase	integrase	A0A286S1S8	Klebsiella_phage	65.8	9.0e-169
WP_015584784.1|1712544_1712793_-	excisionase family protein	NA	S4TND0	Salmonella_phage	64.6	9.5e-27
WP_065906111.1|1712806_1713046_-	DUF4222 domain-containing protein	NA	H6WZF9	Escherichia_phage	50.0	1.1e-11
WP_065906113.1|1713045_1713267_-	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	53.6	3.1e-13
WP_065906115.1|1713263_1713455_-	DUF1382 family protein	NA	A0A0P0ZC60	Stx2-converting_phage	64.4	8.6e-12
WP_065906118.1|1713451_1713796_-	DUF551 domain-containing protein	NA	U5P092	Shigella_phage	57.3	2.7e-19
WP_065906120.1|1713792_1714014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065906122.1|1714010_1714538_-	phage N-6-adenine-methyltransferase	NA	Q9ZWX6	Enterobacteria_phage	61.6	4.9e-57
WP_071934167.1|1714534_1714693_-	DUF1317 family protein	NA	A0A0N7CHV0	Escherichia_phage	60.8	2.3e-10
WP_065906126.1|1714963_1715611_-	single-stranded DNA-binding protein	NA	A0A1W6JP21	Morganella_phage	61.9	4.3e-63
WP_004135670.1|1715762_1715960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065906132.1|1715967_1716972_-	hypothetical protein	NA	A0A077KCC0	Edwardsiella_phage	76.8	6.8e-39
WP_048757281.1|1717059_1717254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065906134.1|1717682_1717886_+	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	2.0e-19
WP_065906136.1|1717922_1718966_-	ParA family protein	NA	H2BD62	Pseudomonas_phage	27.0	6.6e-13
WP_004201113.1|1719217_1719916_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
WP_049266891.1|1720027_1720255_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
WP_049266890.1|1720295_1720517_+	bacteriophage CII family protein	NA	NA	NA	NA	NA
WP_065906138.1|1720602_1721502_+	replication protein	NA	K7PGT1	Enterobacteria_phage	47.9	7.9e-63
WP_065906139.1|1721498_1722347_+	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	59.9	6.9e-93
WP_065906141.1|1722343_1722646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906145.1|1723019_1723502_+	class I SAM-dependent methyltransferase	NA	H9C170	Pectobacterium_phage	79.4	5.5e-71
WP_065906150.1|1723498_1724149_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	46.8	5.9e-36
WP_065906151.1|1724426_1724966_+	hypothetical protein	NA	Q6UAT8	Klebsiella_phage	78.6	2.4e-14
WP_065906153.1|1725435_1725624_+	hypothetical protein	NA	R9TNE4	Aeromonas_phage	74.6	2.1e-18
WP_065906155.1|1725616_1725922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906157.1|1726000_1726258_+	DNA polymerase III subunit theta	NA	G8C7V1	Escherichia_phage	72.7	1.7e-26
WP_065906158.1|1726273_1726633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071934169.1|1726819_1727287_+	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	6.4e-32
WP_071934171.1|1727267_1727438_+	NinE family protein	NA	K7P7K0	Enterobacteria_phage	63.6	9.4e-10
WP_065906164.1|1727430_1727721_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	88.5	1.4e-45
WP_065906165.1|1727717_1728080_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	78.3	3.1e-50
WP_155763444.1|1728076_1728217_+	YlcG family protein	NA	NA	NA	NA	NA
WP_065907353.1|1728216_1728906_+	antiterminator	NA	I6PDF8	Cronobacter_phage	54.5	2.3e-62
WP_044346992.1|1730016_1730286_+|holin	holin	holin	K7P6H9	Enterobacteria_phage	82.6	4.2e-36
WP_065907355.1|1730263_1730830_+	lysozyme	NA	K7P7Q3	Enterobacteria_phage	83.5	3.4e-88
WP_065906168.1|1730829_1731291_+|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	62.1	2.2e-40
WP_155763445.1|1731802_1732108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906172.1|1732408_1732600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906178.1|1732698_1733334_+	hypothetical protein	NA	I6S676	Salmonella_phage	81.1	1.0e-101
WP_065906180.1|1733365_1733815_+	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	73.6	6.7e-47
WP_065906182.1|1733824_1735300_+|terminase	terminase	terminase	A0A1W6JNY3	Morganella_phage	77.8	4.2e-231
WP_065906184.1|1735311_1736733_+	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	69.8	1.9e-183
WP_065906186.1|1736695_1737697_+|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	69.8	1.8e-116
1737444:1737461	attR	ATCGGCTGGGGCTGAAGA	NA	NA	NA	NA
WP_065906188.1|1737739_1738255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906190.1|1738323_1739709_+	DUF2213 domain-containing protein	NA	F1C5D9	Cronobacter_phage	63.4	1.6e-163
WP_065906192.1|1739712_1740153_+	hypothetical protein	NA	F1C5E0	Cronobacter_phage	65.8	2.3e-44
WP_065906195.1|1740164_1741262_+|coat	phage coat protein	coat	F1C5E1	Cronobacter_phage	74.7	1.3e-152
WP_065906197.1|1741271_1741574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906199.1|1741576_1741960_+	hypothetical protein	NA	F1C5E2	Cronobacter_phage	74.8	8.8e-48
WP_065906203.1|1742132_1742495_+	hypothetical protein	NA	G0ZNE2	Cronobacter_phage	50.8	1.4e-26
WP_065906205.1|1742497_1742866_+	hypothetical protein	NA	F1C5E3	Cronobacter_phage	80.3	3.2e-47
WP_065906207.1|1742862_1743246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065906209.1|1743304_1744069_+	immunoglobulin domain-containing protein	NA	G0ZNE6	Cronobacter_phage	43.8	7.4e-38
WP_065906213.1|1744129_1744843_+	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	54.6	5.6e-64
WP_015584733.1|1745058_1745589_+	KilA-N domain-containing protein	NA	A0A2H4FQV0	Salmonella_phage	89.7	1.3e-86
WP_071934175.1|1746177_1746582_+	hypothetical protein	NA	A0A286S1N7	Klebsiella_phage	43.0	3.8e-17
WP_065906216.1|1746638_1749947_+	tape measure protein	NA	R9TMK1	Aeromonas_phage	53.4	2.4e-205
WP_015584729.1|1750008_1750251_+	DUF4282 domain-containing protein	NA	NA	NA	NA	NA
WP_049264444.1|1750289_1750469_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_071887212.1|1750448_1750712_-	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
WP_155763460.1|1750882_1751302_+	hypothetical protein	NA	F1C5F0	Cronobacter_phage	55.3	3.8e-36
WP_065906220.1|1751301_1751772_+	hypothetical protein	NA	F1C5F1	Cronobacter_phage	37.9	4.7e-27
WP_065906221.1|1751768_1752164_+	hypothetical protein	NA	F1C5F2	Cronobacter_phage	57.9	9.1e-40
WP_065906223.1|1752150_1754634_+	MoaD/ThiS family protein	NA	F1C5A7	Cronobacter_phage	45.5	3.6e-198
WP_065906225.1|1756529_1757375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015584719.1|1757481_1757772_+	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	43.5	8.5e-11
>prophage 2
NZ_CP008886	Raoultella ornithinolytica strain A14 chromosome, complete genome	5398272	2681697	2694867	5398272		Escherichia_phage(28.57%)	12	NA	NA
WP_065906562.1|2681697_2684805_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
WP_004862386.1|2684990_2686256_+	MFS transporter	NA	NA	NA	NA	NA
WP_032717509.1|2686298_2687399_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	81.9	8.7e-173
WP_032687689.1|2687500_2687761_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	83.1	7.4e-30
WP_004862397.1|2688056_2688932_+	class A broad-spectrum beta-lactamase ORN-1	NA	Q1MVP3	Enterobacteria_phage	71.1	4.1e-109
WP_004862401.1|2689041_2689272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004862406.1|2689657_2689900_+	DinI family protein	NA	Q6UAW0	Klebsiella_phage	79.7	8.1e-31
WP_065906563.1|2690057_2692103_-	peptidyl-dipeptidase Dcp	NA	A0A1V0SIU1	Klosneuvirus	21.3	7.9e-18
WP_065906564.1|2692089_2692323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004862414.1|2692849_2693599_+	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA	NA
WP_004862416.1|2693691_2694378_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004862418.1|2694435_2694867_-	universal stress protein G	NA	A0A1W6JNV4	Morganella_phage	39.3	3.9e-20
>prophage 3
NZ_CP008886	Raoultella ornithinolytica strain A14 chromosome, complete genome	5398272	2881799	2892948	5398272		uncultured_Caudovirales_phage(50.0%)	10	NA	NA
WP_081312996.1|2881799_2883947_+	formate dehydrogenase subunit alpha	NA	A0A077SK27	Escherichia_phage	23.5	1.8e-28
WP_004862868.1|2884098_2884557_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	36.9	7.4e-17
WP_044349866.1|2884602_2887818_-	molybdopterin-dependent oxidoreductase	NA	A0A0P0IVM8	Acinetobacter_phage	25.6	2.5e-10
WP_004862872.1|2888166_2888937_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	29.1	1.4e-15
WP_015584171.1|2889027_2889411_+	glyoxalase I, nickel isomerase	NA	NA	NA	NA	NA
WP_065906626.1|2889446_2890088_+	CatA-like O-acetyltransferase	NA	NA	NA	NA	NA
WP_044349868.1|2890067_2890493_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	62.6	3.1e-41
WP_015584168.1|2890502_2891795_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	69.6	1.8e-161
WP_004862888.1|2891840_2892161_-	metalloregulator ArsR/SmtB family transcription factor	NA	A0A2H4J145	uncultured_Caudovirales_phage	47.4	3.8e-20
WP_032717686.1|2892249_2892948_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	65.1	1.1e-83
