assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	1	25214-25354	1	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	CAGCAGACAGAATGTTATTCAACCCGCCCGCTGTTATCTCT	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|89aa|up_3|NZ_CP016889.1_21719_21986_+,NA|59aa|up_0|NZ_CP016889.1_24719_24896_+,NA|91aa|down_8|NZ_CP016889.1_36390_36663_-	NA|284aa|up_9|NZ_CP016889.1_14544_15396_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|319aa|up_8|NZ_CP016889.1_15392_16349_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|536aa|up_7|NZ_CP016889.1_16376_17984_-	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|426aa|up_6|NZ_CP016889.1_18066_19344_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|223aa|up_5|NZ_CP016889.1_19354_20023_-	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase	NA|490aa|up_4|NZ_CP016889.1_20051_21521_-	pfam00171, Aldedh, Aldehyde dehydrogenase family	NA|89aa|up_3|NZ_CP016889.1_21719_21986_+	NA	NA|486aa|up_2|NZ_CP016889.1_21967_23425_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|320aa|up_1|NZ_CP016889.1_23585_24545_-	PRK12679, cbl, HTH-type transcriptional regulator Cbl	NA|59aa|up_0|NZ_CP016889.1_24719_24896_+	NA	NA|306aa|down_0|NZ_CP016889.1_26124_27042_-	PRK11233, PRK11233, nitrogen assimilation transcriptional regulator; Provisional	NA|345aa|down_1|NZ_CP016889.1_27496_28531_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|495aa|down_2|NZ_CP016889.1_28545_30030_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|308aa|down_3|NZ_CP016889.1_30062_30986_-	cd06301, PBP1_rhizopine_binding-like, periplasmic binding proteins specific to rhizopines	NA|101aa|down_4|NZ_CP016889.1_31657_31960_-	pfam13744, HTH_37, Helix-turn-helix domain	NA|118aa|down_5|NZ_CP016889.1_31964_32318_-	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown]	NA|363aa|down_6|NZ_CP016889.1_32616_33705_-	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|721aa|down_7|NZ_CP016889.1_34100_36263_+	PRK10003, PRK10003, ferric-rhodotorulic acid outer membrane transporter; Provisional	NA|91aa|down_8|NZ_CP016889.1_36390_36663_-	NA	NA|641aa|down_9|NZ_CP016889.1_37335_39258_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	2	1598964-1599099	2	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	CCTTTCCGATCTGACCGTGTTCCCGAAGCAGTCTCGATCTGAC	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA	NA|182aa|up_9|NZ_CP016889.1_1586836_1587382_-	PRK11001, mtlR, MltR family transcriptional regulator	NA|383aa|up_8|NZ_CP016889.1_1587446_1588595_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|645aa|up_7|NZ_CP016889.1_1588691_1590626_-	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional	NA|239aa|up_6|NZ_CP016889.1_1591058_1591775_-	pfam11254, DUF3053, Protein of unknown function (DUF3053)	NA|533aa|up_5|NZ_CP016889.1_1592012_1593611_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|99aa|up_4|NZ_CP016889.1_1594345_1594642_+	PRK10072, PRK10072, HTH-type transcriptional regulator	NA|198aa|up_3|NZ_CP016889.1_1594683_1595277_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|155aa|up_2|NZ_CP016889.1_1595339_1595804_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|143aa|up_1|NZ_CP016889.1_1595899_1596328_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|564aa|up_0|NZ_CP016889.1_1596649_1598341_+	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase	NA|537aa|down_0|NZ_CP016889.1_1599772_1601383_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|301aa|down_1|NZ_CP016889.1_1602582_1603485_+	PRK10913, PRK10913, dipeptide ABC transporter permease DppC	NA|329aa|down_2|NZ_CP016889.1_1603497_1604484_+	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional	NA|341aa|down_3|NZ_CP016889.1_1604473_1605496_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|195aa|down_4|NZ_CP016889.1_1606343_1606928_+	pfam17037, CBP_BcsO, Cellulose biosynthesis protein BcsO	NA|268aa|down_5|NZ_CP016889.1_1606918_1607722_+	TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ	NA|704aa|down_6|NZ_CP016889.1_1607771_1609883_+	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming)	NA|984aa|down_7|NZ_CP016889.1_1609879_1612831_+	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA|1272aa|down_8|NZ_CP016889.1_1612842_1616658_+	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C)	NA|336aa|down_9|NZ_CP016889.1_1617108_1618116_+	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	3	1605622-1605741	3	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	CGTTGGCCCGGCTACGGGCACACCTCAGGGATGAGGTGCGTA	42	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA	NA|533aa|up_9|NZ_CP016889.1_1592012_1593611_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|99aa|up_8|NZ_CP016889.1_1594345_1594642_+	PRK10072, PRK10072, HTH-type transcriptional regulator	NA|198aa|up_7|NZ_CP016889.1_1594683_1595277_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|155aa|up_6|NZ_CP016889.1_1595339_1595804_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|143aa|up_5|NZ_CP016889.1_1595899_1596328_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|564aa|up_4|NZ_CP016889.1_1596649_1598341_+	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase	NA|537aa|up_3|NZ_CP016889.1_1599772_1601383_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|301aa|up_2|NZ_CP016889.1_1602582_1603485_+	PRK10913, PRK10913, dipeptide ABC transporter permease DppC	NA|329aa|up_1|NZ_CP016889.1_1603497_1604484_+	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional	NA|341aa|up_0|NZ_CP016889.1_1604473_1605496_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|195aa|down_0|NZ_CP016889.1_1606343_1606928_+	pfam17037, CBP_BcsO, Cellulose biosynthesis protein BcsO	NA|268aa|down_1|NZ_CP016889.1_1606918_1607722_+	TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ	NA|704aa|down_2|NZ_CP016889.1_1607771_1609883_+	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming)	NA|984aa|down_3|NZ_CP016889.1_1609879_1612831_+	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA|1272aa|down_4|NZ_CP016889.1_1612842_1616658_+	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C)	NA|336aa|down_5|NZ_CP016889.1_1617108_1618116_+	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8	NA|554aa|down_6|NZ_CP016889.1_1618249_1619911_-	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG	NA|63aa|down_7|NZ_CP016889.1_1619910_1620099_-	pfam11120, CBP_BcsF, Cellulose biosynthesis protein BcsF	NA|512aa|down_8|NZ_CP016889.1_1620098_1621634_-	pfam10995, CBP_GIL, GGDEF I-site like or GIL domain	NA|66aa|down_9|NZ_CP016889.1_1621834_1622032_+	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	4	1610016-1610107	4	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	CTGATGCTGCTTCCAGCACGCAGCCTGCC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA	NA|155aa|up_9|NZ_CP016889.1_1595339_1595804_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|143aa|up_8|NZ_CP016889.1_1595899_1596328_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|564aa|up_7|NZ_CP016889.1_1596649_1598341_+	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase	NA|537aa|up_6|NZ_CP016889.1_1599772_1601383_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|301aa|up_5|NZ_CP016889.1_1602582_1603485_+	PRK10913, PRK10913, dipeptide ABC transporter permease DppC	NA|329aa|up_4|NZ_CP016889.1_1603497_1604484_+	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional	NA|341aa|up_3|NZ_CP016889.1_1604473_1605496_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|195aa|up_2|NZ_CP016889.1_1606343_1606928_+	pfam17037, CBP_BcsO, Cellulose biosynthesis protein BcsO	NA|268aa|up_1|NZ_CP016889.1_1606918_1607722_+	TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ	NA|704aa|up_0|NZ_CP016889.1_1607771_1609883_+	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming)	NA|1272aa|down_0|NZ_CP016889.1_1612842_1616658_+	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C)	NA|336aa|down_1|NZ_CP016889.1_1617108_1618116_+	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8	NA|554aa|down_2|NZ_CP016889.1_1618249_1619911_-	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG	NA|63aa|down_3|NZ_CP016889.1_1619910_1620099_-	pfam11120, CBP_BcsF, Cellulose biosynthesis protein BcsF	NA|512aa|down_4|NZ_CP016889.1_1620098_1621634_-	pfam10995, CBP_GIL, GGDEF I-site like or GIL domain	NA|66aa|down_5|NZ_CP016889.1_1621834_1622032_+	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR	NA|244aa|down_6|NZ_CP016889.1_1622031_1622763_+	pfam06564, CBP_BcsQ, Cellulose biosynthesis protein BcsQ	NA|868aa|down_7|NZ_CP016889.1_1622759_1625363_+	PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	NA|763aa|down_8|NZ_CP016889.1_1625367_1627656_+	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA|1156aa|down_9|NZ_CP016889.1_1627648_1631116_+	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	5	1704521-1704624	5	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	TCAGGTCCGGCGGCGCAATCCTCTGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA	NA|309aa|up_9|NZ_CP016889.1_1692361_1693288_-	PRK15421, PRK15421, HTH-type transcriptional regulator MetR	NA|757aa|up_8|NZ_CP016889.1_1693432_1695703_+	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|278aa|up_7|NZ_CP016889.1_1695758_1696592_-	pfam01738, DLH, Dienelactone hydrolase family	NA|254aa|up_6|NZ_CP016889.1_1696895_1697657_+	PRK11178, PRK11178, uridine phosphorylase; Provisional	NA|423aa|up_5|NZ_CP016889.1_1697749_1699018_+	sd00006, TPR, Tetratricopeptide repeat	NA|500aa|up_4|NZ_CP016889.1_1699103_1700603_+	PRK10361, PRK10361, DNA recombination protein RmuC; Provisional	NA|253aa|up_3|NZ_CP016889.1_1700678_1701437_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|202aa|up_2|NZ_CP016889.1_1701448_1702054_+	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown]	NA|546aa|up_1|NZ_CP016889.1_1702050_1703688_+	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed	NA|85aa|up_0|NZ_CP016889.1_1703797_1704052_+	PRK04598, tatA, twin-arginine translocase subunit TatA	NA|253aa|down_0|NZ_CP016889.1_1704738_1705497_+	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC	NA|261aa|down_1|NZ_CP016889.1_1705585_1706368_+	PRK10425, PRK10425, 3'-5' ssDNA/RNA exonuclease TatD	NA|163aa|down_2|NZ_CP016889.1_1706364_1706853_-	PRK09014, rfaH, transcription/translation regulatory transformer protein RfaH	NA|242aa|down_3|NZ_CP016889.1_1707059_1707785_+	PRK05282, PRK05282, dipeptidase PepE	NA|495aa|down_4|NZ_CP016889.1_1707865_1709350_+	PRK10922, PRK10922, 4-hydroxy-3-polyprenylbenzoate decarboxylase	NA|234aa|down_5|NZ_CP016889.1_1709391_1710093_+	PRK08051, fre, FMN reductase; Validated	NA|388aa|down_6|NZ_CP016889.1_1710174_1711338_-	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed	NA|728aa|down_7|NZ_CP016889.1_1711348_1713532_-	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|444aa|down_8|NZ_CP016889.1_1713718_1715050_+	PRK13607, PRK13607, proline dipeptidase; Provisional	NA|206aa|down_9|NZ_CP016889.1_1715049_1715667_+	PRK11568, PRK11568, IMPACT family protein
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	6	2332994-2333328	6,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,cas3,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCNAGCGGGGATAAACCG,TGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,32	1	1	2333023-2333055	NZ_CP016889.1_1485795-1485827	I-E:I-E:I-E	5,5,3	5	Orphan	DEDDh,cas3,DinG,csa3	NA|59aa|up_6|NZ_CP016889.1_2324380_2324557_-,NA	NA|320aa|up_9|NZ_CP016889.1_2320399_2321359_-	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only]	NA|471aa|up_8|NZ_CP016889.1_2321355_2322768_-	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|452aa|up_7|NZ_CP016889.1_2322966_2324322_-	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|59aa|up_6|NZ_CP016889.1_2324380_2324557_-	NA	NA|255aa|up_5|NZ_CP016889.1_2324837_2325602_+	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|889aa|up_4|NZ_CP016889.1_2325705_2328372_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|634aa|up_3|NZ_CP016889.1_2328386_2330288_+	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|475aa|up_2|NZ_CP016889.1_2330448_2331873_+	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|60aa|up_1|NZ_CP016889.1_2332055_2332235_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|142aa|up_0|NZ_CP016889.1_2332261_2332687_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|300aa|down_0|NZ_CP016889.1_2333397_2334297_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|170aa|down_1|NZ_CP016889.1_2334402_2334912_+	pfam05870, PA_decarbox, Phenolic acid decarboxylase (PAD)	NA|286aa|down_2|NZ_CP016889.1_2334998_2335856_+	cd07739, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|866aa|down_3|NZ_CP016889.1_2336281_2338879_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|126aa|down_4|NZ_CP016889.1_2339069_2339447_+	PRK05248, PRK05248, hypothetical protein; Provisional	NA|431aa|down_5|NZ_CP016889.1_2339600_2340893_-	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane]	NA|270aa|down_6|NZ_CP016889.1_2341071_2341881_-	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|288aa|down_7|NZ_CP016889.1_2341909_2342773_-	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|116aa|down_8|NZ_CP016889.1_2342875_2343223_-	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS)	NA|532aa|down_9|NZ_CP016889.1_2343405_2345001_+	PRK10965, PRK10965, multicopper oxidase; Provisional
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	7	2610033-2610140	7	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	GCGTTGTTCAAAAACGCTCCCGGCGTTTTT	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|287aa|up_3|NZ_CP016889.1_2605759_2606620_+,NA	NA|184aa|up_9|NZ_CP016889.1_2598587_2599139_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|695aa|up_8|NZ_CP016889.1_2599297_2601382_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|111aa|up_7|NZ_CP016889.1_2601437_2601770_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|202aa|up_6|NZ_CP016889.1_2601769_2602375_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|625aa|up_5|NZ_CP016889.1_2602472_2604347_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|290aa|up_4|NZ_CP016889.1_2604703_2605573_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|287aa|up_3|NZ_CP016889.1_2605759_2606620_+	NA	NA|215aa|up_2|NZ_CP016889.1_2606749_2607394_+	PRK00279, adk, adenylate kinase; Reviewed	NA|320aa|up_1|NZ_CP016889.1_2607507_2608467_+	PRK00035, hemH, ferrochelatase; Reviewed	NA|434aa|up_0|NZ_CP016889.1_2608525_2609827_+	PRK15074, PRK15074, inosine/guanosine kinase; Provisional	NA|565aa|down_0|NZ_CP016889.1_2610263_2611958_-	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional	NA|589aa|down_1|NZ_CP016889.1_2612498_2614265_+	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed	NA|144aa|down_2|NZ_CP016889.1_2614299_2614731_-	COG4125, COG4125, Predicted membrane protein [Function unknown]	NA|290aa|down_3|NZ_CP016889.1_2614820_2615690_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|160aa|down_4|NZ_CP016889.1_2615686_2616166_-	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA|268aa|down_5|NZ_CP016889.1_2616340_2617144_-	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown]	NA|838aa|down_6|NZ_CP016889.1_2617215_2619729_-	PRK10671, copA, copper-exporting P-type ATPase CopA	NA|135aa|down_7|NZ_CP016889.1_2619826_2620231_+	PRK10227, PRK10227, HTH-type transcriptional regulator CueR	NA|149aa|down_8|NZ_CP016889.1_2620218_2620665_-	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|305aa|down_9|NZ_CP016889.1_2620664_2621579_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]
GCF_001709315.1_ASM170931v1	NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	8	4157827-4157918	8	CRISPRCasFinder	no		DEDDh,cas3,DinG	Orphan	AAGTGAGTTTCATTGATGCGCCT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA	NA|248aa|up_9|NZ_CP016889.1_4145623_4146367_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|233aa|up_8|NZ_CP016889.1_4146367_4147066_-	pfam07385, Lyx_isomer, D-lyxose isomerase	NA|313aa|up_7|NZ_CP016889.1_4147110_4148049_-	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|327aa|up_6|NZ_CP016889.1_4148139_4149120_-	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only]	NA|505aa|up_5|NZ_CP016889.1_4149130_4150645_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|875aa|up_4|NZ_CP016889.1_4150792_4153417_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|295aa|up_3|NZ_CP016889.1_4153370_4154255_-	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|287aa|up_2|NZ_CP016889.1_4154251_4155112_-	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|309aa|up_1|NZ_CP016889.1_4155205_4156132_-	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein	NA|277aa|up_0|NZ_CP016889.1_4156158_4156989_-	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|379aa|down_0|NZ_CP016889.1_4158440_4159577_-	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional	NA|238aa|down_1|NZ_CP016889.1_4159573_4160287_-	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|254aa|down_2|NZ_CP016889.1_4160287_4161049_-	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional	NA|283aa|down_3|NZ_CP016889.1_4161038_4161887_-	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism]	NA|359aa|down_4|NZ_CP016889.1_4161879_4162956_-	pfam05861, PhnI, Bacterial phosphonate metabolism protein (PhnI)	NA|192aa|down_5|NZ_CP016889.1_4162955_4163531_-	PRK10147, phnH, phosphonate C-P lyase system protein PhnH	NA|149aa|down_6|NZ_CP016889.1_4163530_4163977_-	pfam06754, PhnG, Phosphonate metabolism protein PhnG	NA|238aa|down_7|NZ_CP016889.1_4163976_4164690_-	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional	NA|210aa|down_8|NZ_CP016889.1_4164921_4165551_+	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|276aa|down_9|NZ_CP016889.1_4165927_4166755_-	cd00293, USP_Like, Usp: Universal stress protein family
GCF_001709315.1_ASM170931v1	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	1	476113-476188	1	CRISPRCasFinder	no		csa3	Orphan	AACGTTCACTGTAATCAGTAGAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA|310aa|down_0|NZ_CP016890.1_476869_477799_-	NA|500aa|up_9|NZ_CP016890.1_462603_464103_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|187aa|up_8|NZ_CP016890.1_464121_464682_-	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP	NA|484aa|up_7|NZ_CP016890.1_465027_466479_-	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|301aa|up_6|NZ_CP016890.1_466678_467581_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|250aa|up_5|NZ_CP016890.1_467778_468528_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|433aa|up_4|NZ_CP016890.1_468582_469881_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|281aa|up_3|NZ_CP016890.1_469893_470736_+	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|337aa|up_2|NZ_CP016890.1_470737_471748_+	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|324aa|up_1|NZ_CP016890.1_472877_473849_-	pfam08775, ParB, ParB family	NA|400aa|up_0|NZ_CP016890.1_473856_475056_-	pfam18607, HTH_54, ParA helix turn helix domain	NA|310aa|down_0|NZ_CP016890.1_476869_477799_-	NA	NA|457aa|down_1|NZ_CP016890.1_478258_479629_+	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional	NA|393aa|down_2|NZ_CP016890.1_479632_480811_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|410aa|down_3|NZ_CP016890.1_480903_482133_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|113aa|down_4|NZ_CP016890.1_482253_482592_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|183aa|down_5|NZ_CP016890.1_482592_483141_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|218aa|down_6|NZ_CP016890.1_483267_483921_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|down_7|NZ_CP016890.1_483917_484241_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|301aa|down_8|NZ_CP016890.1_484348_485251_+	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|231aa|down_9|NZ_CP016890.1_485307_486000_+	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus
GCF_001709315.1_ASM170931v1	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	2	476264-476366	2	CRISPRCasFinder	no		csa3	Orphan	AACGTTCACTGTAATCAGTAGAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA|310aa|down_0|NZ_CP016890.1_476869_477799_-	NA|500aa|up_9|NZ_CP016890.1_462603_464103_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|187aa|up_8|NZ_CP016890.1_464121_464682_-	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP	NA|484aa|up_7|NZ_CP016890.1_465027_466479_-	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|301aa|up_6|NZ_CP016890.1_466678_467581_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|250aa|up_5|NZ_CP016890.1_467778_468528_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|433aa|up_4|NZ_CP016890.1_468582_469881_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|281aa|up_3|NZ_CP016890.1_469893_470736_+	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|337aa|up_2|NZ_CP016890.1_470737_471748_+	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|324aa|up_1|NZ_CP016890.1_472877_473849_-	pfam08775, ParB, ParB family	NA|400aa|up_0|NZ_CP016890.1_473856_475056_-	pfam18607, HTH_54, ParA helix turn helix domain	NA|310aa|down_0|NZ_CP016890.1_476869_477799_-	NA	NA|457aa|down_1|NZ_CP016890.1_478258_479629_+	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional	NA|393aa|down_2|NZ_CP016890.1_479632_480811_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|410aa|down_3|NZ_CP016890.1_480903_482133_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|113aa|down_4|NZ_CP016890.1_482253_482592_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|183aa|down_5|NZ_CP016890.1_482592_483141_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|218aa|down_6|NZ_CP016890.1_483267_483921_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|down_7|NZ_CP016890.1_483917_484241_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|301aa|down_8|NZ_CP016890.1_484348_485251_+	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|231aa|down_9|NZ_CP016890.1_485307_486000_+	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus
GCF_001709315.1_ASM170931v1	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	3	476513-476605	3	CRISPRCasFinder	no		csa3	Orphan	AACGTTCACTGTAATCAGTAGAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA,NA|310aa|down_0|NZ_CP016890.1_476869_477799_-	NA|500aa|up_9|NZ_CP016890.1_462603_464103_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|187aa|up_8|NZ_CP016890.1_464121_464682_-	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP	NA|484aa|up_7|NZ_CP016890.1_465027_466479_-	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|301aa|up_6|NZ_CP016890.1_466678_467581_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|250aa|up_5|NZ_CP016890.1_467778_468528_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|433aa|up_4|NZ_CP016890.1_468582_469881_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|281aa|up_3|NZ_CP016890.1_469893_470736_+	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|337aa|up_2|NZ_CP016890.1_470737_471748_+	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|324aa|up_1|NZ_CP016890.1_472877_473849_-	pfam08775, ParB, ParB family	NA|400aa|up_0|NZ_CP016890.1_473856_475056_-	pfam18607, HTH_54, ParA helix turn helix domain	NA|310aa|down_0|NZ_CP016890.1_476869_477799_-	NA	NA|457aa|down_1|NZ_CP016890.1_478258_479629_+	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional	NA|393aa|down_2|NZ_CP016890.1_479632_480811_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|410aa|down_3|NZ_CP016890.1_480903_482133_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|113aa|down_4|NZ_CP016890.1_482253_482592_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|183aa|down_5|NZ_CP016890.1_482592_483141_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|218aa|down_6|NZ_CP016890.1_483267_483921_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|down_7|NZ_CP016890.1_483917_484241_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|301aa|down_8|NZ_CP016890.1_484348_485251_+	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|231aa|down_9|NZ_CP016890.1_485307_486000_+	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus
