assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001713415.1_ASM171341v1	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	1	626954-627187	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2	DEDDh,cas2	Unclear	GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT,GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT,GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAATC	36,36,37	0	0	NA	NA	NA:NA:NA	3,3,2	3	Unclear	RT,csa3,cas3,DEDDh,DinG,cas2	NA,NA	NA|371aa|up_9|NZ_CP016453.1_612337_613450_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|818aa|up_8|NZ_CP016453.1_613543_615997_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|561aa|up_7|NZ_CP016453.1_616030_617713_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|503aa|up_6|NZ_CP016453.1_617715_619224_-	PRK09302, PRK09302, circadian clock protein KaiC; Reviewed	NA|271aa|up_5|NZ_CP016453.1_619340_620153_-	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|257aa|up_4|NZ_CP016453.1_620241_621012_-	COG3931, COG3931, Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]	NA|310aa|up_3|NZ_CP016453.1_621026_621956_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|272aa|up_2|NZ_CP016453.1_621971_622787_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|629aa|up_1|NZ_CP016453.1_622898_624785_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|292aa|up_0|NZ_CP016453.1_624849_625725_+	pfam10728, DUF2520, Domain of unknown function (DUF2520)	NA|314aa|down_0|NZ_CP016453.1_627188_628130_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas2|102aa|down_1|NZ_CP016453.1_628885_629191_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|289aa|down_2|NZ_CP016453.1_631953_632820_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|282aa|down_3|NZ_CP016453.1_632831_633677_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|610aa|down_4|NZ_CP016453.1_633846_635676_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|459aa|down_5|NZ_CP016453.1_635776_637153_+	cd08882, RHO_alpha_C_MupW-like, C-terminal catalytic domain of Pseudomonas fluorescens MupW and related aromatic ring hydroxylating dioxygenases	NA|595aa|down_6|NZ_CP016453.1_637149_638934_+	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	NA|270aa|down_7|NZ_CP016453.1_642176_642986_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|522aa|down_8|NZ_CP016453.1_643139_644705_+	cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM)	NA|383aa|down_9|NZ_CP016453.1_644722_645871_+	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase
GCF_001713415.1_ASM171341v1	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	2	628315-628813	2,2,2	CRT,PILER-CR,CRISPRCasFinder	no	cas2	DEDDh,cas2	Unclear	GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT,GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT,GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATAAT	36,36,36	0	0	NA	NA	NA:NA:NA	7,6,6	7	Unclear	RT,csa3,cas3,DEDDh,DinG,cas2	NA|68aa|up_1|NZ_CP016453.1_626750_626954_+,NA	NA|561aa|up_9|NZ_CP016453.1_616030_617713_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|503aa|up_8|NZ_CP016453.1_617715_619224_-	PRK09302, PRK09302, circadian clock protein KaiC; Reviewed	NA|271aa|up_7|NZ_CP016453.1_619340_620153_-	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|257aa|up_6|NZ_CP016453.1_620241_621012_-	COG3931, COG3931, Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]	NA|310aa|up_5|NZ_CP016453.1_621026_621956_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|272aa|up_4|NZ_CP016453.1_621971_622787_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|629aa|up_3|NZ_CP016453.1_622898_624785_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|292aa|up_2|NZ_CP016453.1_624849_625725_+	pfam10728, DUF2520, Domain of unknown function (DUF2520)	NA|68aa|up_1|NZ_CP016453.1_626750_626954_+	NA	NA|314aa|up_0|NZ_CP016453.1_627188_628130_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas2|102aa|down_0|NZ_CP016453.1_628885_629191_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|289aa|down_1|NZ_CP016453.1_631953_632820_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|282aa|down_2|NZ_CP016453.1_632831_633677_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|610aa|down_3|NZ_CP016453.1_633846_635676_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|459aa|down_4|NZ_CP016453.1_635776_637153_+	cd08882, RHO_alpha_C_MupW-like, C-terminal catalytic domain of Pseudomonas fluorescens MupW and related aromatic ring hydroxylating dioxygenases	NA|595aa|down_5|NZ_CP016453.1_637149_638934_+	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	NA|270aa|down_6|NZ_CP016453.1_642176_642986_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|522aa|down_7|NZ_CP016453.1_643139_644705_+	cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM)	NA|383aa|down_8|NZ_CP016453.1_644722_645871_+	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase	NA|304aa|down_9|NZ_CP016453.1_645985_646897_+	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs
GCF_001713415.1_ASM171341v1	NZ_CP016456	Sphingobium sp. RAC03 chromosome, complete genome	1	1257368-1257472	1	CRISPRCasFinder	no		RT,csa3,cas3,DEDDh,DinG	Orphan	ATTGTGTAGACGCTTTGTGTAGAC	24	1	1	1257392-1257448	NZ_CP016456.1_1254599-1254543	NA	1	1	Orphan	RT,csa3,cas3,DEDDh,DinG,cas2	NA|164aa|up_9|NZ_CP016456.1_1248424_1248916_+,NA|205aa|up_8|NZ_CP016456.1_1248969_1249584_-,NA|75aa|up_7|NZ_CP016456.1_1250133_1250358_+,NA|86aa|up_6|NZ_CP016456.1_1250669_1250927_-,NA|78aa|down_0|NZ_CP016456.1_1257698_1257932_+	NA|164aa|up_9|NZ_CP016456.1_1248424_1248916_+	NA	NA|205aa|up_8|NZ_CP016456.1_1248969_1249584_-	NA	NA|75aa|up_7|NZ_CP016456.1_1250133_1250358_+	NA	NA|86aa|up_6|NZ_CP016456.1_1250669_1250927_-	NA	NA|181aa|up_5|NZ_CP016456.1_1251147_1251690_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|110aa|up_4|NZ_CP016456.1_1251852_1252182_+	pfam01527, HTH_Tnp_1, Transposase	NA|116aa|up_3|NZ_CP016456.1_1252178_1252526_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|538aa|up_2|NZ_CP016456.1_1252585_1254199_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|378aa|up_1|NZ_CP016456.1_1254676_1255810_-	COG3177, COG3177, Fic family protein [Function unknown]	NA|451aa|up_0|NZ_CP016456.1_1255963_1257316_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|78aa|down_0|NZ_CP016456.1_1257698_1257932_+	NA	NA|213aa|down_1|NZ_CP016456.1_1257961_1258600_+	PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S subunit; Provisional	NA|319aa|down_2|NZ_CP016456.1_1258596_1259553_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|736aa|down_3|NZ_CP016456.1_1259549_1261757_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|2506aa|down_4|NZ_CP016456.1_1262000_1269518_+	NF033203, entero_EhxA, enterohemolysin EhxA	NA|226aa|down_5|NZ_CP016456.1_1269583_1270261_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|79aa|down_6|NZ_CP016456.1_1270264_1270501_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|247aa|down_7|NZ_CP016456.1_1270615_1271356_+	COG1801, COG1801, Uncharacterized conserved protein [Function unknown]	NA|62aa|down_8|NZ_CP016456.1_1271689_1271875_-	TIGR02978, Phage_shock_protein_C	NA|134aa|down_9|NZ_CP016456.1_1272214_1272616_+	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like
