The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	21972	39629	2114553	tRNA	Streptococcus_phage(91.67%)	17	NA	NA
WP_069168328.1|21972_23403_+	signal recognition particle protein	NA	D6PHS7	uncultured_phage	29.9	2.8e-06
WP_004897108.1|23489_23762_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_004895297.1|23830_24352_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_004895296.1|24341_25064_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_003647502.1|25177_25528_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000420682.1|25924_26239_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|26254_26641_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|26669_28055_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000398284.1|28231_29437_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|29479_29701_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|29817_30315_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000331160.1|30778_33226_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_001574271.1|33228_35406_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	85.6	2.4e-307
WP_001574272.1|35402_36404_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	99.7	2.5e-190
WP_001224318.1|36400_37333_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001791010.1|37577_37694_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_069168329.1|37709_39629_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.4	0.0e+00
>prophage 2
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	43302	52659	2114553	integrase,transposase	Streptococcus_phage(88.89%)	12	43067:43082	55223:55238
43067:43082	attL	TTTGAACTTGTTCTTT	NA	NA	NA	NA
WP_000336291.1|43302_44286_+	protein rep	NA	A0A286QS97	Streptococcus_phage	62.0	6.1e-08
WP_001573639.1|44518_45769_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	59.4	2.0e-109
WP_000336323.1|46201_46369_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|46428_46782_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|47286_47709_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|47705_47936_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|48396_48600_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|48681_49899_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_004897109.1|50114_50756_-	signal peptidase I	NA	NA	NA	NA	NA
WP_069168331.1|50957_51377_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_069169036.1|51360_51999_+	uracil-DNA glycosylase	NA	NA	NA	NA	NA
WP_011162245.1|52035_52659_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	56.3	3.2e-15
55223:55238	attR	AAAGAACAAGTTCAAA	NA	NA	NA	NA
>prophage 3
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	77739	183463	2114553	capsid,integrase,head,terminase,tRNA,protease,tail,portal,transposase	Lactobacillus_prophage(42.19%)	108	100966:100983	155082:155099
WP_069168336.1|77739_78633_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_069168337.1|78645_79584_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
WP_069168338.1|79842_81354_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	24.9	4.9e-25
WP_069168339.1|81370_81997_+	GyrI-like domain-containing protein	NA	NA	NA	NA	NA
WP_012845970.1|82137_83196_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_004897146.1|83207_83786_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_004897147.1|83803_85678_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.3	1.1e-135
WP_004897148.1|85757_86924_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	21.6	4.4e-13
WP_014567315.1|87069_88908_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.1	2.4e-21
WP_069168340.1|89075_89765_+	class A sortase	NA	NA	NA	NA	NA
WP_004897151.1|89864_92135_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	34.1	1.9e-81
WP_004897152.1|92269_92797_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	39.3	1.4e-24
WP_069168341.1|92921_94430_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA	NA
WP_069168342.1|94478_95966_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_069168343.1|96100_97057_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	58.0	6.3e-111
WP_069168344.1|97074_97578_+	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.2	5.3e-24
WP_069168345.1|97754_99098_+	SLC45 family MFS transporter	NA	NA	NA	NA	NA
WP_069168346.1|99171_101439_-	HAD-IC family P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	26.0	8.4e-45
100966:100983	attL	TTTTTTAATTGCTTTTGA	NA	NA	NA	NA
WP_004897158.1|101562_102411_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_069168347.1|102870_104046_-|integrase	site-specific integrase	integrase	Q6SEG4	Lactobacillus_prophage	99.0	1.1e-221
WP_014567326.1|104200_104419_-	hypothetical protein	NA	E9LUL0	Lactobacillus_phage	54.0	1.2e-14
WP_069169037.1|104463_104691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069168348.1|105530_106028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069168349.1|106248_106893_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
WP_069169039.1|106920_107343_-	hypothetical protein	NA	Q6SEF7	Lactobacillus_prophage	69.3	5.3e-46
WP_069168350.1|107332_107773_-	helix-turn-helix domain-containing protein	NA	Q6SEF6	Lactobacillus_prophage	93.8	1.0e-71
WP_069168351.1|107947_108169_+	DUF739 family protein	NA	Q6SEF5	Lactobacillus_prophage	90.4	5.1e-32
WP_069168352.1|108198_108996_+	ORF6N domain-containing protein	NA	Q9T1J2	Lactobacillus_phage	69.8	7.2e-52
WP_069168353.1|108998_109211_+	hypothetical protein	NA	Q9T1J1	Lactobacillus_phage	88.6	1.1e-28
WP_069168354.1|109613_109823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069168355.1|109879_110107_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_069168356.1|110201_110411_+	helix-turn-helix domain-containing protein	NA	Q6SE97	Lactobacillus_prophage	98.6	2.8e-32
WP_172821770.1|110570_110744_+	hypothetical protein	NA	Q20DG5	Lactobacillus_phage	82.0	1.2e-15
WP_069168357.1|110767_111109_+	hypothetical protein	NA	L0P7D6	Lactobacillus_phage	58.3	5.0e-26
WP_082224949.1|111124_111610_+	siphovirus Gp157 family protein	NA	A0A0A1EL06	Lactobacillus_phage	42.1	8.3e-27
WP_069168358.1|111623_112487_+	ERF family protein	NA	A0A2D1GPH8	Lactobacillus_phage	43.0	3.8e-22
WP_069168359.1|112495_113284_+	conserved phage C-terminal domain-containing protein	NA	X2CYF1	Lactobacillus_phage	42.2	5.7e-41
WP_069168360.1|113296_114097_+	ATP-binding protein	NA	B8R682	Lactobacillus_phage	49.4	9.8e-65
WP_069168361.1|114121_114472_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082224951.1|114479_115628_+|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	38.5	5.2e-59
WP_069168362.1|115629_116271_+	methylase	NA	L0P368	Streptococcus_phage	46.4	7.6e-52
WP_155762253.1|116254_116440_+	sporulation protein Cse60	NA	NA	NA	NA	NA
WP_069168363.1|116474_116753_+	hypothetical protein	NA	Q9T1H3	Lactobacillus_phage	73.4	1.6e-19
WP_069168364.1|116755_117022_+	hypothetical protein	NA	X2CYF2	Lactobacillus_phage	46.1	4.3e-09
WP_069169042.1|117021_117219_+	hypothetical protein	NA	Q9T1H0	Lactobacillus_phage	87.7	1.6e-29
WP_069168365.1|117215_117422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155762235.1|117415_117589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155762236.1|117601_117955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168367.1|118028_118328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168368.1|118529_118751_+	hypothetical protein	NA	A9D9P7	Lactobacillus_prophage	80.8	8.7e-24
WP_069168369.1|118938_119256_+	hypothetical protein	NA	A9D9Q0	Lactobacillus_prophage	60.9	1.6e-26
WP_069168370.1|119258_119483_+	hypothetical protein	NA	Q20DE8	Lactobacillus_phage	77.8	3.4e-23
WP_167739989.1|119463_119631_+	hypothetical protein	NA	Q20DE7	Lactobacillus_phage	80.0	1.7e-19
WP_069168371.1|119652_120156_+	hypothetical protein	NA	A9D9Q7	Lactobacillus_prophage	95.8	7.2e-90
WP_155762237.1|121409_121574_+	transmembrane Fragile-X-F protein	NA	NA	NA	NA	NA
WP_069168372.1|121653_122508_+|terminase	terminase small subunit	terminase	Q6SE85	Lactobacillus_prophage	84.9	1.7e-131
WP_069168373.1|122494_123769_+|terminase	PBSX family phage terminase large subunit	terminase	Q6SE84	Lactobacillus_prophage	94.8	1.6e-247
WP_069168374.1|123784_125284_+|portal	phage portal protein	portal	Q6SE83	Lactobacillus_prophage	87.2	7.5e-252
WP_082224953.1|125213_125501_+|protease	ribosomal-processing cysteine protease Prp	protease	Q6SE82	Lactobacillus_prophage	74.7	6.0e-33
WP_069168375.1|125507_126611_+|capsid	minor capsid protein	capsid	Q6SE81	Lactobacillus_prophage	77.3	1.7e-155
WP_069168376.1|126603_126795_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168377.1|126923_127574_+	DUF4355 domain-containing protein	NA	Q6SE80	Lactobacillus_prophage	73.1	1.0e-75
WP_069168378.1|127576_127945_+	hypothetical protein	NA	Q6SE79	Lactobacillus_prophage	93.4	9.1e-58
WP_069168379.1|127962_129012_+|capsid	major capsid protein	capsid	Q6SE78	Lactobacillus_prophage	96.6	4.4e-190
WP_069169043.1|129039_129339_+|head,tail	phage head-tail connector protein	head,tail	Q6SE77	Lactobacillus_prophage	78.8	2.5e-37
WP_069168380.1|129335_129689_+	hypothetical protein	NA	Q6SE76	Lactobacillus_prophage	81.2	9.3e-52
WP_069168381.1|129681_130230_+	HK97 gp10 family phage protein	NA	Q6SE75	Lactobacillus_prophage	84.0	1.1e-83
WP_069168382.1|130230_130599_+	hypothetical protein	NA	Q6SE74	Lactobacillus_prophage	88.5	5.5e-55
WP_069168383.1|130602_131094_+|tail	phage tail protein	tail	Q6SE73	Lactobacillus_prophage	88.0	4.6e-73
WP_069168384.1|131159_131570_+	hypothetical protein	NA	Q6SE72	Lactobacillus_prophage	96.3	3.1e-67
WP_069168385.1|131662_131956_+	hypothetical protein	NA	Q6SE71	Lactobacillus_prophage	99.0	6.8e-48
WP_069168386.1|131955_138021_+	lytic transglycosylase	NA	Q6SE70	Lactobacillus_prophage	97.3	0.0e+00
WP_004897007.1|138038_138395_+	hypothetical protein	NA	Q6SE69	Lactobacillus_prophage	100.0	1.3e-61
WP_004897009.1|144226_144379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168387.1|144362_144623_+	hypothetical protein	NA	Q6SE67	Lactobacillus_prophage	95.3	1.6e-37
WP_069168388.1|144622_145021_+	hypothetical protein	NA	B8R662	Lactobacillus_phage	30.3	3.3e-13
WP_004897012.1|145034_145253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004897013.1|145249_145594_+	hypothetical protein	NA	Q38316	Lactobacillus_phage	90.4	7.2e-49
WP_069168389.1|145597_146551_+	SH3 domain-containing protein	NA	Q6SE63	Lactobacillus_prophage	60.6	1.3e-108
WP_004897159.1|147121_147706_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_004897160.1|147883_149170_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	51.7	2.6e-107
WP_172821771.1|149283_149565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168390.1|149631_151254_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.6	2.2e-47
WP_069168391.1|151451_152729_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	1.1e-49
WP_004897162.1|152819_153800_+	choloylglycine hydrolase family protein	NA	M1HS66	Paramecium_bursaria_Chlorella_virus	29.5	1.2e-24
WP_011162169.1|153849_154239_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004897164.1|154468_155320_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
155082:155099	attR	TTTTTTAATTGCTTTTGA	NA	NA	NA	NA
WP_004897165.1|155319_156024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069168392.1|156441_157296_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_069168393.1|157312_158362_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.4	7.1e-31
WP_004897168.1|158354_159056_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_053107141.1|159192_160599_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_069168394.1|160613_161987_+	flavocytochrome c	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	30.8	2.1e-46
WP_069168395.1|163100_164483_+	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_011162159.1|164576_165602_+	asparaginase	NA	NA	NA	NA	NA
WP_069168396.1|168126_169818_+	cell division protein	NA	NA	NA	NA	NA
WP_069168397.1|169882_170386_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_069168398.1|170447_171395_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_004895134.1|171427_171808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168399.1|171825_174075_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1X9SH80	Bradyrhizobium_phage	41.4	5.6e-09
WP_061399931.1|174074_174512_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_069168400.1|174794_176081_+|tRNA	histidine--tRNA ligase	tRNA	A0A1V0S921	Catovirus	27.2	1.4e-28
WP_012846053.1|176082_177936_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_069168401.1|178051_179329_-|transposase	ISL3-like element ISLjo2 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.6	1.1e-49
WP_069168402.1|179481_180666_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_069168403.1|180772_181201_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_069168404.1|181205_181967_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_069168405.1|182413_183463_+|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	35.9	2.6e-49
>prophage 4
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	1381736	1426213	2114553	protease,transposase	Bacillus_phage(27.27%)	47	NA	NA
WP_069168741.1|1381736_1383014_+|transposase	ISL3-like element ISLjo2 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.1	2.7e-48
WP_004896231.1|1383317_1384025_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.7	3.0e-41
WP_011161302.1|1384071_1385922_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	32.4	3.5e-33
WP_069168798.1|1385911_1387240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011161304.1|1387229_1388051_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_069168799.1|1388056_1388854_+	MBL fold metallo-hydrolase	NA	A0A0B5A2C7	Paenibacillus_phage	33.7	1.6e-27
WP_053106806.1|1388937_1390158_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	29.1	2.0e-21
WP_069168800.1|1391147_1391801_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_069168801.1|1391812_1393159_-	ABC transporter ATP-binding protein	NA	A0A1V0SI78	Klosneuvirus	20.7	2.3e-13
WP_061400884.1|1393133_1393697_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_069168802.1|1393933_1394860_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_069168803.1|1395083_1395374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168804.1|1395498_1396683_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_069168805.1|1396772_1397663_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_004896202.1|1397671_1398229_-	LemA family protein	NA	NA	NA	NA	NA
WP_069168806.1|1398344_1399451_-	cation transporter	NA	NA	NA	NA	NA
WP_004898492.1|1399625_1400036_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_003649666.1|1400114_1400255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168807.1|1400430_1401291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168808.1|1401423_1402731_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_069168809.1|1402740_1403865_+	beta-glucanase	NA	NA	NA	NA	NA
WP_004896187.1|1403979_1404624_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_069168810.1|1404625_1405555_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_004898506.1|1405636_1405903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014566955.1|1406156_1406915_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.4	1.4e-28
WP_069168811.1|1406904_1408518_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA	NA
WP_069168812.1|1408853_1409480_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_069168813.1|1409555_1409918_+	DUF488 family protein	NA	NA	NA	NA	NA
WP_069168814.1|1409914_1410697_-	TerC family protein	NA	A0A068EP98	Bacillus_phage	41.2	1.1e-41
WP_061400873.1|1410683_1411214_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_069168815.1|1411330_1412044_-	NAD-dependent protein deacylase	NA	NA	NA	NA	NA
WP_014566959.1|1412169_1412646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168816.1|1412713_1414183_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_004898528.1|1414187_1414895_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_014566961.1|1414918_1415845_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014566962.1|1415933_1416665_+	viroplasmin family protein	NA	C1KFJ1	Lactobacillus_virus	34.5	2.2e-31
WP_044025895.1|1416748_1416958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023599067.1|1417126_1418095_-	DUF1002 domain-containing protein	NA	NA	NA	NA	NA
WP_069168817.1|1418217_1419048_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_014566964.1|1419072_1419735_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_004896146.1|1419821_1420184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014566965.1|1420266_1421256_+	ribose-phosphate diphosphokinase	NA	A0A2H4UV84	Bodo_saltans_virus	27.2	1.9e-30
WP_069168818.1|1421423_1421708_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168405.1|1421766_1422816_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	35.9	2.6e-49
WP_069169066.1|1423007_1424201_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_069168819.1|1424555_1424843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168820.1|1424998_1426213_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 5
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	1517063	1525789	2114553	tRNA,transposase	Phaeocystis_globosa_virus(33.33%)	8	NA	NA
WP_014567013.1|1517063_1518326_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.6	1.6e-85
WP_069168405.1|1518357_1519407_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	35.9	2.6e-49
WP_014567014.1|1519768_1521082_+	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	31.9	6.1e-64
WP_014567015.1|1521097_1521751_+	hypothetical protein	NA	S4W232	Pandoravirus	26.1	5.4e-05
WP_004898664.1|1521816_1523127_-	aminopeptidase	NA	R4TV59	Phaeocystis_globosa_virus	34.2	1.2e-64
WP_004898665.1|1523289_1523919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168845.1|1523918_1524323_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_069168846.1|1524565_1525789_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	48.0	8.1e-95
>prophage 6
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	1584873	1644939	2114553	holin,tRNA,transposase	Bacillus_phage(16.67%)	50	NA	NA
WP_080502235.1|1584873_1584966_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_069168864.1|1585139_1586117_-	helix-turn-helix transcriptional regulator	NA	A0A0A8WJE4	Clostridium_phage	35.2	3.0e-07
WP_069168865.1|1586203_1586800_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014567043.1|1586801_1587335_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004045666.1|1587545_1587959_+	YjdF family protein	NA	NA	NA	NA	NA
WP_080502236.1|1588143_1588236_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_069168866.1|1588471_1589254_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_069168867.1|1589274_1590141_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_080558334.1|1590412_1590505_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_044025905.1|1590788_1591943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168868.1|1592125_1592971_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.9	2.4e-21
WP_014567049.1|1592970_1593837_+	multidrug ABC transporter permease	NA	NA	NA	NA	NA
WP_043921362.1|1593826_1594276_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004898815.1|1594277_1594667_+	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_004898818.1|1594691_1595195_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_155762244.1|1596564_1597967_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.6	8.6e-40
WP_014567056.1|1598042_1598558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004898834.1|1598752_1600111_-	formyl-CoA transferase	NA	NA	NA	NA	NA
WP_004898837.1|1600116_1601853_-	oxalyl-CoA decarboxylase	NA	E5ERI2	Ostreococcus_lucimarinus_virus	23.3	1.3e-18
WP_014567057.1|1602204_1603386_+	AEC family transporter	NA	NA	NA	NA	NA
WP_014567058.1|1603455_1603671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014567059.1|1603762_1604386_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_014567060.1|1604509_1604962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014567061.1|1607774_1609190_-	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_069168870.1|1609267_1610095_-	AraC family ligand binding domain-containing protein	NA	NA	NA	NA	NA
WP_069168871.1|1610315_1612277_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_069168872.1|1612260_1614459_+	alpha-galactosidase	NA	NA	NA	NA	NA
WP_014567065.1|1614469_1615912_+	sucrose phosphorylase	NA	NA	NA	NA	NA
WP_014567066.1|1616065_1617301_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.1	2.8e-95
WP_069168873.1|1617588_1618581_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_069168874.1|1618577_1619477_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_069168875.1|1619469_1620234_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	4.9e-05
WP_082225001.1|1620338_1621937_+	APC family permease	NA	NA	NA	NA	NA
WP_004898881.1|1622053_1622305_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_069168876.1|1622467_1623835_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_069168877.1|1623850_1625305_+	DEAD/DEAH box helicase	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	39.4	4.1e-69
WP_069168878.1|1625380_1625740_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_069168879.1|1625739_1626870_+	alanine racemase	NA	NA	NA	NA	NA
WP_069168880.1|1626932_1627613_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_004898900.1|1627758_1628730_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_014567075.1|1628914_1629472_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_069168881.1|1629473_1632971_+	transcription-repair coupling factor	NA	S6B678	Bacillus_phage	34.3	2.8e-07
WP_004898904.1|1632987_1633230_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_004895915.1|1633318_1633696_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_004898907.1|1633695_1634052_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_069168882.1|1634074_1635370_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A0N7G7K4	Chrysochromulina_ericina_virus	22.9	8.0e-08
WP_014567079.1|1635453_1637580_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	42.2	4.1e-110
WP_069168883.1|1640399_1643042_+	YfhO family protein	NA	NA	NA	NA	NA
WP_069169068.1|1643183_1643816_+|transposase	IS607 family transposase	transposase	Q331V0	Clostridium_botulinum_C_phage	52.1	9.8e-60
WP_069168884.1|1643778_1644939_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	C1KFS0	Lactobacillus_virus	43.9	2.2e-81
>prophage 7
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	1681368	1741894	2114553	tRNA,transposase	Staphylococcus_virus(40.0%)	39	NA	NA
WP_014567091.1|1681368_1682160_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_011161528.1|1682262_1682706_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_004895822.1|1682719_1683115_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_014567093.1|1683480_1684176_-	NAD-dependent protein deacetylase	NA	NA	NA	NA	NA
WP_155762245.1|1684187_1684829_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_069168890.1|1686050_1686641_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_044025910.1|1686784_1687651_+	NmrA family NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_069168891.1|1687884_1688469_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_069168892.1|1688731_1689421_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_069168893.1|1689447_1689774_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014567101.1|1689868_1690753_+	cation transporter	NA	NA	NA	NA	NA
WP_069168894.1|1690816_1691074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053107057.1|1691075_1691318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172821779.1|1691327_1692017_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_014567106.1|1692125_1693061_+	AAA family ATPase	NA	I7CCW4	Staphylococcus_virus	29.0	2.0e-13
WP_069168895.1|1693296_1704165_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_082225003.1|1704562_1704913_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_014567110.1|1704978_1705206_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_069168897.1|1705123_1706488_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	27.4	3.2e-39
WP_014567112.1|1706632_1708294_-	amino acid permease	NA	NA	NA	NA	NA
WP_069168898.1|1708773_1709961_+	accessory Sec system protein translocase subunit SecY2	NA	NA	NA	NA	NA
WP_069168899.1|1709963_1711472_+	accessory Sec system protein Asp1	NA	NA	NA	NA	NA
WP_069168900.1|1713000_1713861_+	accessory Sec system protein Asp3	NA	NA	NA	NA	NA
WP_014567118.1|1716243_1717773_+	accessory Sec system glycosyltransferase GtfA	NA	NA	NA	NA	NA
WP_069168901.1|1717765_1719094_+	accessory Sec system glycosylation chaperone GtfB	NA	NA	NA	NA	NA
WP_044025913.1|1719086_1719275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155762246.1|1719698_1719971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155762247.1|1721732_1723988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069168902.1|1723977_1730247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044025916.1|1730245_1730548_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_004897518.1|1730721_1730898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080558344.1|1730891_1731242_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_069168903.1|1731306_1731537_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_172821784.1|1731490_1732819_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	28.0	1.1e-41
WP_172821780.1|1732932_1733118_+	SLAP domain-containing protein	NA	NA	NA	NA	NA
WP_069168905.1|1733135_1734842_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	38.5	2.3e-95
WP_069168906.1|1735457_1739780_+	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_155762259.1|1740413_1740476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172821784.1|1740565_1741894_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	28.0	1.1e-41
>prophage 8
NZ_CP016400	Lactobacillus johnsonii strain BS15 chromosome, complete genome	2114553	1802945	1855126	2114553	tRNA,transposase	uncultured_virus(25.0%)	44	NA	NA
WP_014567158.1|1802945_1804280_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQE5	Streptococcus_phage	36.4	3.8e-61
WP_014567159.1|1804380_1804845_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	42.3	6.5e-29
WP_003647732.1|1804996_1805641_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_069168926.1|1805781_1806348_+	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
WP_069168927.1|1806425_1807136_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_061400204.1|1807250_1808651_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_069168928.1|1808660_1810202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009559328.1|1810593_1811796_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_082225007.1|1811819_1812125_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_004895701.1|1812284_1812743_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004896777.1|1812739_1813498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003647727.1|1814425_1814710_+	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	39.8	5.6e-15
WP_004896780.1|1814740_1816372_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.4	3.9e-161
WP_082225008.1|1816511_1817345_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_050756193.1|1817926_1818172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069168931.1|1818204_1819968_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	26.5	2.3e-18
WP_004896783.1|1820084_1822658_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	24.7	2.4e-40
WP_069168932.1|1822663_1824556_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	31.9	2.1e-57
WP_069168933.1|1824561_1825137_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_004895679.1|1825165_1826185_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.2	8.5e-13
WP_014567170.1|1826245_1826701_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_004896789.1|1828244_1829366_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_004896790.1|1829403_1830369_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_069168934.1|1830352_1831738_+	DEAD/DEAH box helicase	NA	E3T5E1	Cafeteria_roenbergensis_virus	30.3	1.0e-48
WP_069168935.1|1831969_1834618_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.4	8.0e-63
WP_003647717.1|1834672_1834930_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_069168936.1|1834929_1835361_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_004895671.1|1835362_1835677_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_004896794.1|1835734_1836277_+	CvpA family protein	NA	NA	NA	NA	NA
WP_069168937.1|1836319_1838686_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	52.6	2.1e-22
WP_004895668.1|1838764_1839076_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	38.4	7.0e-19
WP_004896796.1|1839158_1839554_-	YslB family protein	NA	NA	NA	NA	NA
WP_069168938.1|1839650_1840451_+	glutamate racemase	NA	NA	NA	NA	NA
WP_014567176.1|1840453_1841077_+	XTP/dITP diphosphatase	NA	Q66YC8	Euphorbia_ringspot_virus	29.3	8.5e-08
WP_069168939.1|1841229_1842408_+	acetate kinase	NA	NA	NA	NA	NA
WP_004896804.1|1842453_1843350_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_004895662.1|1843472_1843904_+	DUF948 domain-containing protein	NA	NA	NA	NA	NA
WP_004895661.1|1843926_1844259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008459757.1|1844616_1844964_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_004896819.1|1845019_1845253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014567179.1|1845209_1846553_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	30.3	1.1e-47
WP_069168940.1|1847003_1852049_+	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_069168941.1|1852355_1853633_+|transposase	ISL3-like element ISLjo2 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	5.4e-49
WP_014567179.1|1853782_1855126_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	30.3	1.1e-47
