assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001721905.1_ASM172190v1	NZ_CP016163	Enterococcus faecium strain ISMMS_VRE_11 chromosome, complete genome	1	804946-805055	1	CRISPRCasFinder	no		cas3,RT,csa3,cas14j,DinG,DEDDh,cas2	Orphan	TGATGAACAATACTGGTTGAGCAAAG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,cas14j,DinG,DEDDh,cas2,WYL	NA,NA	NA|168aa|up_9|NZ_CP016163.1_797003_797507_+	pfam06177, QueT, QueT transporter	NA|215aa|up_8|NZ_CP016163.1_797562_798207_-	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily	NA|51aa|up_7|NZ_CP016163.1_798368_798521_+	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|57aa|up_6|NZ_CP016163.1_798544_798715_+	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|182aa|up_5|NZ_CP016163.1_798815_799361_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|296aa|up_4|NZ_CP016163.1_799437_800325_+	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|291aa|up_3|NZ_CP016163.1_801606_802479_-	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|223aa|up_2|NZ_CP016163.1_802491_803160_-	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|141aa|up_1|NZ_CP016163.1_803502_803925_+	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|230aa|up_0|NZ_CP016163.1_804028_804718_+	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|168aa|down_0|NZ_CP016163.1_805127_805631_+	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|123aa|down_1|NZ_CP016163.1_805683_806052_+	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|230aa|down_2|NZ_CP016163.1_806157_806847_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_3|NZ_CP016163.1_808071_808980_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|511aa|down_4|NZ_CP016163.1_809369_810902_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|234aa|down_5|NZ_CP016163.1_811135_811837_+	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|238aa|down_6|NZ_CP016163.1_812090_812804_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|380aa|down_7|NZ_CP016163.1_813112_814252_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|322aa|down_8|NZ_CP016163.1_814340_815306_-	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|720aa|down_9|NZ_CP016163.1_815355_817515_-	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated
GCF_001721905.1_ASM172190v1	NZ_CP016164	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence	1	177255-177382	1	CRISPRCasFinder	no		csa3	Orphan	TCAGAGGGTATGAAAATCATACC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,csa3,cas14j,DinG,DEDDh,cas2,WYL	NA,NA|111aa|down_0|NZ_CP016164.1_178712_179045_+,NA|80aa|down_2|NZ_CP016164.1_180118_180358_+,NA|65aa|down_3|NZ_CP016164.1_180469_180664_+,NA|252aa|down_7|NZ_CP016164.1_184229_184985_+,NA|87aa|down_8|NZ_CP016164.1_184997_185258_+	NA|211aa|up_9|NZ_CP016164.1_162666_163299_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|908aa|up_8|NZ_CP016164.1_163311_166035_-	COG3933, COG3933, Transcriptional antiterminator [Transcription]	NA|322aa|up_7|NZ_CP016164.1_166150_167116_-	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane]	NA|271aa|up_6|NZ_CP016164.1_167169_167982_-	pfam03613, EIID-AGA, PTS system mannose/fructose/sorbose family IID component	NA|258aa|up_5|NZ_CP016164.1_167995_168769_-	pfam03609, EII-Sor, PTS system sorbose-specific iic component	NA|157aa|up_4|NZ_CP016164.1_168782_169253_-	pfam03830, PTSIIB_sorb, PTS system sorbose subfamily IIB component	NA|139aa|up_3|NZ_CP016164.1_169249_169666_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|432aa|up_2|NZ_CP016164.1_172253_173549_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|106aa|up_1|NZ_CP016164.1_173963_174281_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|85aa|up_0|NZ_CP016164.1_174281_174536_-	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	NA|111aa|down_0|NZ_CP016164.1_178712_179045_+	NA	NA|114aa|down_1|NZ_CP016164.1_179663_180005_+	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|80aa|down_2|NZ_CP016164.1_180118_180358_+	NA	NA|65aa|down_3|NZ_CP016164.1_180469_180664_+	NA	NA|224aa|down_4|NZ_CP016164.1_180749_181421_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|659aa|down_5|NZ_CP016164.1_181472_183449_+	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|251aa|down_6|NZ_CP016164.1_183461_184214_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|252aa|down_7|NZ_CP016164.1_184229_184985_+	NA	NA|87aa|down_8|NZ_CP016164.1_184997_185258_+	NA	NA|697aa|down_9|NZ_CP016164.1_185254_187345_+	pfam17998, AgI_II_C2, Cell surface antigen I/II C2 terminal domain
