assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001729805.1_ASM172980v1	NZ_CP017184	Enterobacter roggenkampii strain DSM 16690 chromosome, complete genome	1	1503019-1504308	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas1	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Unclear	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	21,21,19	21	Unclear	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|162aa|up_9|NZ_CP017184.1_1489993_1490479_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|266aa|up_8|NZ_CP017184.1_1490475_1491273_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|911aa|up_7|NZ_CP017184.1_1491530_1494263_+	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|145aa|up_6|NZ_CP017184.1_1494399_1494834_+	PRK15328, PRK15328, type III secretion system invasion protein IagB	NA|604aa|up_5|NZ_CP017184.1_1494984_1496796_+	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain	NA|338aa|up_4|NZ_CP017184.1_1496956_1497970_-	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|479aa|up_3|NZ_CP017184.1_1498062_1499499_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|334aa|up_2|NZ_CP017184.1_1499509_1500511_-	PRK10534, PRK10534, L-threonine aldolase; Provisional	NA|573aa|up_1|NZ_CP017184.1_1500549_1502268_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|145aa|up_0|NZ_CP017184.1_1502418_1502853_+	pfam07681, DoxX, DoxX	NA|323aa|down_0|NZ_CP017184.1_1504394_1505363_-	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional	NA|551aa|down_1|NZ_CP017184.1_1505373_1507026_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|down_2|NZ_CP017184.1_1507170_1508070_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|down_3|NZ_CP017184.1_1508240_1508936_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|down_4|NZ_CP017184.1_1509226_1510885_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|down_5|NZ_CP017184.1_1510881_1511838_-	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|372aa|down_6|NZ_CP017184.1_1511997_1513113_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|647aa|down_7|NZ_CP017184.1_1513109_1515050_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|74aa|down_8|NZ_CP017184.1_1515120_1515342_-	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|107aa|down_9|NZ_CP017184.1_1515609_1515930_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed
GCF_001729805.1_ASM172980v1	NZ_CP017184	Enterobacter roggenkampii strain DSM 16690 chromosome, complete genome	2	1520404-1521512	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGTGCAGGCAGCTTAGAAA,GTTCACTGCCGTGCAGGCAGCTTAGAAA,GTTCACTGCCGTGCAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	18,18,11	18	TypeI-F	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|147aa|up_0|NZ_CP017184.1_1519787_1520228_+,NA	NA|232aa|up_9|NZ_CP017184.1_1508240_1508936_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_8|NZ_CP017184.1_1509226_1510885_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_7|NZ_CP017184.1_1510881_1511838_-	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|372aa|up_6|NZ_CP017184.1_1511997_1513113_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|647aa|up_5|NZ_CP017184.1_1513109_1515050_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|74aa|up_4|NZ_CP017184.1_1515120_1515342_-	PRK14998, PRK14998, cold shock-like protein CspD; Provisional	NA|107aa|up_3|NZ_CP017184.1_1515609_1515930_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|760aa|up_2|NZ_CP017184.1_1515957_1518237_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|385aa|up_1|NZ_CP017184.1_1518393_1519548_+	pfam00665, rve, Integrase core domain	NA|147aa|up_0|NZ_CP017184.1_1519787_1520228_+	NA	cas1|328aa|down_0|NZ_CP017184.1_1521843_1522827_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1078aa|down_1|NZ_CP017184.1_1522823_1526057_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|437aa|down_2|NZ_CP017184.1_1526073_1527384_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|312aa|down_3|NZ_CP017184.1_1527380_1528316_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|333aa|down_4|NZ_CP017184.1_1528329_1529328_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|NZ_CP017184.1_1529337_1529892_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|158aa|down_6|NZ_CP017184.1_1529913_1530387_-	COG5654, COG5654, Uncharacterized conserved protein [Function unknown]	NA|148aa|down_7|NZ_CP017184.1_1530383_1530827_-	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|73aa|down_8|NZ_CP017184.1_1532165_1532384_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_9|NZ_CP017184.1_1532668_1533373_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed
GCF_001729805.1_ASM172980v1	NZ_CP017184	Enterobacter roggenkampii strain DSM 16690 chromosome, complete genome	3	1531065-1532053	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	GTGCACTGCCGTACAGGCAGCTTAGAAA,GTGCACTGCCGTACAGGCAGCTTAGAAA,GTGCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	14,16,15	16	TypeI-F	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|147aa|up_8|NZ_CP017184.1_1519787_1520228_+,NA	NA|385aa|up_9|NZ_CP017184.1_1518393_1519548_+	pfam00665, rve, Integrase core domain	NA|147aa|up_8|NZ_CP017184.1_1519787_1520228_+	NA	cas1|328aa|up_7|NZ_CP017184.1_1521843_1522827_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1078aa|up_6|NZ_CP017184.1_1522823_1526057_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|437aa|up_5|NZ_CP017184.1_1526073_1527384_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|312aa|up_4|NZ_CP017184.1_1527380_1528316_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|333aa|up_3|NZ_CP017184.1_1528329_1529328_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_2|NZ_CP017184.1_1529337_1529892_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|158aa|up_1|NZ_CP017184.1_1529913_1530387_-	COG5654, COG5654, Uncharacterized conserved protein [Function unknown]	NA|148aa|up_0|NZ_CP017184.1_1530383_1530827_-	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|73aa|down_0|NZ_CP017184.1_1532165_1532384_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP017184.1_1532668_1533373_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP017184.1_1533418_1535140_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP017184.1_1535139_1536906_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|323aa|down_4|NZ_CP017184.1_1537020_1537989_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP017184.1_1538533_1539028_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1225aa|down_6|NZ_CP017184.1_1539163_1542838_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|205aa|down_7|NZ_CP017184.1_1542966_1543581_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP017184.1_1543590_1544934_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP017184.1_1545026_1546319_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
GCF_001729805.1_ASM172980v1	NZ_CP017184	Enterobacter roggenkampii strain DSM 16690 chromosome, complete genome	4	3601003-3601108	4	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	AAAAAAGGTGGTACAGGGTGGGACA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|215aa|up_4|NZ_CP017184.1_3594564_3595209_+,NA|391aa|up_3|NZ_CP017184.1_3595558_3596731_-,NA|183aa|up_2|NZ_CP017184.1_3597182_3597731_+,NA|110aa|down_1|NZ_CP017184.1_3604994_3605324_+	NA|113aa|up_9|NZ_CP017184.1_3590895_3591234_+	PRK11548, PRK11548, outer membrane protein assembly factor BamE	NA|96aa|up_8|NZ_CP017184.1_3591342_3591630_-	PRK01777, PRK01777, RnfH family protein	NA|159aa|up_7|NZ_CP017184.1_3591619_3592096_-	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin	NA|161aa|up_6|NZ_CP017184.1_3592213_3592696_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|416aa|up_5|NZ_CP017184.1_3593315_3594563_+	PRK09692, PRK09692, integrase; Provisional	NA|215aa|up_4|NZ_CP017184.1_3594564_3595209_+	NA	NA|391aa|up_3|NZ_CP017184.1_3595558_3596731_-	NA	NA|183aa|up_2|NZ_CP017184.1_3597182_3597731_+	NA	NA|172aa|up_1|NZ_CP017184.1_3597807_3598323_+	TIGR00575, DNA_ligase, DNA ligase, NAD-dependent	NA|72aa|up_0|NZ_CP017184.1_3598657_3598873_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|1161aa|down_0|NZ_CP017184.1_3601515_3604998_+	TIGR01646, conserved_hypothetical_protein, Rhs element Vgr protein	NA|110aa|down_1|NZ_CP017184.1_3604994_3605324_+	NA	NA|119aa|down_2|NZ_CP017184.1_3605408_3605765_+	pfam06958, Pyocin_S, S-type Pyocin	NA|94aa|down_3|NZ_CP017184.1_3605671_3605953_+	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|719aa|down_4|NZ_CP017184.1_3606538_3608695_+	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional	NA|436aa|down_5|NZ_CP017184.1_3608691_3609999_+	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component	NA|369aa|down_6|NZ_CP017184.1_3610488_3611595_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|229aa|down_7|NZ_CP017184.1_3611591_3612278_+	pfam14279, HNH_5, HNH endonuclease	NA|349aa|down_8|NZ_CP017184.1_3613283_3614330_-	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA|259aa|down_9|NZ_CP017184.1_3614313_3615090_-	pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase
