The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016501	Streptococcus agalactiae strain WC1535 chromosome, complete genome	2212568	170766	182275	2212568	transposase	Streptococcus_phage(90.91%)	15	NA	NA
WP_069571495.1|170766_171468_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.6	1.3e-17
WP_001144248.1|171486_172146_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	55.6	5.2e-64
WP_000160537.1|172410_173577_-|transposase	IS30-like element ISSag9 family transposase	transposase	NA	NA	NA	NA
WP_000715592.1|173785_174421_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
WP_000364565.1|174440_175304_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	49.7	7.3e-74
WP_000358198.1|175333_175660_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_001866320.1|175665_176529_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	3.7e-110
WP_011058366.1|176504_176666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011058365.1|176650_176755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000603277.1|176798_177434_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_001167085.1|178726_179275_+	acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
WP_000232156.1|179337_180519_+	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.6	7.0e-168
WP_000966772.1|180573_181050_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
WP_000287944.1|181051_181408_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	71.8	1.5e-41
WP_000767484.1|181447_182275_-	exodeoxyribonuclease	NA	M1PSC0	Streptococcus_phage	78.0	4.3e-124
>prophage 2
NZ_CP016501	Streptococcus agalactiae strain WC1535 chromosome, complete genome	2212568	1140008	1182358	2212568	tail,portal,terminase,head,holin,protease,capsid	Streptococcus_phage(97.22%)	41	NA	NA
WP_000247956.1|1140008_1140881_-	hypothetical protein	NA	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	25.1	1.3e-06
WP_000504421.1|1140894_1141668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079254335.1|1141737_1143042_-	recombinase family protein	NA	E4ZFN9	Streptococcus_phage	80.0	1.4e-198
WP_000290968.1|1142986_1144228_-	recombinase family protein	NA	A0A1X9I6J1	Streptococcus_phage	69.5	1.2e-170
WP_000123549.1|1144765_1144873_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_000143479.1|1145008_1146415_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1B0RXL4	Streptococcus_phage	63.4	3.7e-107
WP_000661349.1|1146416_1146815_-|holin	holin	holin	D0R0E9	Streptococcus_phage	60.8	5.1e-38
WP_000796404.1|1146832_1148689_-	hypothetical protein	NA	Q6DMS9	Streptococcus_phage	73.3	2.7e-259
WP_069571476.1|1148701_1151617_-	carbamoylsarcosine amidase	NA	Q6DMT0	Streptococcus_phage	64.5	0.0e+00
WP_000589863.1|1151616_1152342_-	hypothetical protein	NA	Q6DMT1	Streptococcus_phage	58.8	2.1e-82
WP_000918343.1|1152338_1155458_-	hypothetical protein	NA	Q6DMT2	Streptococcus_phage	78.0	3.5e-259
WP_001249616.1|1155752_1156172_-	hypothetical protein	NA	A0A1X9I691	Streptococcus_phage	75.5	2.8e-55
WP_000818565.1|1156183_1156753_-	hypothetical protein	NA	E4ZFM9	Streptococcus_phage	97.3	5.1e-100
WP_001209971.1|1156755_1157082_-	hypothetical protein	NA	M1Q1Z4	Streptococcus_phage	67.6	5.4e-38
WP_000161241.1|1157090_1157459_-	hypothetical protein	NA	Q6DMT7	Streptococcus_phage	62.1	9.1e-34
WP_000684962.1|1157451_1157790_-|head,tail	head-tail adaptor protein	head,tail	A0A1B0RXE4	Streptococcus_phage	69.6	1.2e-37
WP_000988605.1|1157789_1158047_-|head,tail	phage gp6-like head-tail connector protein	head,tail	D0R0D7	Streptococcus_phage	78.8	4.3e-30
WP_000040500.1|1158043_1159252_-|capsid	phage major capsid protein	capsid	E4ZFM5	Streptococcus_phage	91.3	6.8e-211
WP_001225236.1|1159265_1159964_-|protease	Clp protease ClpP	protease	A0A1B0RXE1	Streptococcus_phage	82.8	1.4e-104
WP_000523688.1|1159956_1161246_-|portal	phage portal protein	portal	E4ZFM3	Streptococcus_phage	91.0	2.0e-229
WP_000424367.1|1161326_1161599_-	hypothetical protein	NA	E4ZFM1	Streptococcus_phage	78.0	4.1e-07
WP_000666489.1|1161615_1161921_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_001140392.1|1161920_1162223_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_000220985.1|1162278_1163871_-|terminase	terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.5	1.5e-306
WP_000342209.1|1164377_1164827_-	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	65.2	2.1e-16
WP_000164539.1|1164837_1165092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000176350.1|1165169_1166423_-	DNA (cytosine-5-)-methyltransferase	NA	M1NSK8	Streptococcus_phage	93.8	2.5e-232
WP_000211620.1|1166419_1167676_-	lactate dehydrogenase	NA	A0A1B0RXE5	Streptococcus_phage	90.7	7.5e-221
WP_000999418.1|1167647_1168103_-	hypothetical protein	NA	A0A1B0RXC6	Streptococcus_phage	51.0	5.4e-44
WP_001138031.1|1168390_1168756_-	HNH endonuclease	NA	A0A1B0RXJ3	Streptococcus_phage	86.0	6.6e-61
WP_000640707.1|1168757_1169795_-	methionine adenosyltransferase	NA	E4ZFL0	Streptococcus_phage	84.9	2.2e-170
WP_000356300.1|1170187_1170685_-	hypothetical protein	NA	A0A1B0RXB9	Streptococcus_phage	75.0	4.3e-63
WP_000768926.1|1170677_1172054_-	ATP-dependent helicase	NA	A0A1X9I6B0	Streptococcus_phage	86.2	5.2e-231
WP_001208492.1|1172034_1172316_-	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	79.6	7.9e-38
WP_001160920.1|1172599_1174885_-	hypothetical protein	NA	E4ZFK6	Streptococcus_phage	79.1	0.0e+00
WP_000041407.1|1175281_1175605_+	hypothetical protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	2.0e-32
WP_001873559.1|1175597_1176719_+	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	87.9	2.6e-196
WP_000208946.1|1176723_1177287_+	DUF2815 domain-containing protein	NA	A0A1B0RXA9	Streptococcus_phage	93.4	3.3e-91
WP_000905646.1|1177517_1179473_+	DNA polymerase I	NA	D0R0B0	Streptococcus_phage	84.0	0.0e+00
WP_001122250.1|1179511_1180081_-	hypothetical protein	NA	A0A1B0RXB3	Streptococcus_phage	81.0	1.1e-86
WP_000459854.1|1180489_1182358_-	XRE family transcriptional regulator	NA	E4ZFJ9	Streptococcus_phage	81.0	5.2e-303
>prophage 3
NZ_CP016501	Streptococcus agalactiae strain WC1535 chromosome, complete genome	2212568	1492981	1500501	2212568	transposase	Bacillus_virus(50.0%)	7	NA	NA
WP_000041114.1|1492981_1494316_-	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	33.3	1.1e-63
WP_000468675.1|1494522_1495983_+|transposase	IS1182-like element IS1563 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	74.8	1.3e-203
WP_000174854.1|1495992_1496814_-	NAD(+) synthetase	NA	G3MA24	Bacillus_virus	55.1	7.7e-73
WP_000276183.1|1496810_1498271_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.3	3.4e-100
WP_000272353.1|1498428_1499343_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.8	2.1e-87
WP_000478229.1|1499411_1499636_-	DUF4059 domain-containing protein	NA	NA	NA	NA	NA
WP_000593862.1|1499757_1500501_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.1	4.7e-29
>prophage 4
NZ_CP016501	Streptococcus agalactiae strain WC1535 chromosome, complete genome	2212568	1764624	1776689	2212568		Streptomyces_phage(14.29%)	8	NA	NA
WP_000783424.1|1764624_1765929_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
WP_001045908.1|1766075_1766975_-	hypothetical protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000166558.1|1767167_1768715_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	2.5e-77
WP_000780020.1|1768734_1769487_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
WP_000685111.1|1769506_1770058_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
WP_001291325.1|1770225_1771248_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.6	9.6e-65
WP_000220672.1|1771275_1772730_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	6.3e-54
WP_001042263.1|1772963_1776689_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	1.6e-40
>prophage 5
NZ_CP016501	Streptococcus agalactiae strain WC1535 chromosome, complete genome	2212568	1836703	1843907	2212568		Streptococcus_phage(16.67%)	8	NA	NA
WP_000706190.1|1836703_1837948_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.5	1.7e-87
WP_000217765.1|1837949_1839233_+	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
WP_000239224.1|1839355_1839898_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000181757.1|1839897_1840737_+	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
WP_000510606.1|1840712_1841555_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000359358.1|1841547_1842342_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000029067.1|1842557_1843097_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	46.4	3.0e-17
WP_001042661.1|1843202_1843907_+	transglycosylase	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	3.2e-27
>prophage 6
NZ_CP016501	Streptococcus agalactiae strain WC1535 chromosome, complete genome	2212568	1852209	1867825	2212568	integrase	Streptococcus_phage(76.92%)	23	1854788:1854807	1868663:1868682
WP_000852645.1|1852209_1853565_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	62.6	1.2e-152
WP_001278152.1|1853576_1853864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000092759.1|1854193_1854805_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
1854788:1854807	attL	TACAACAAAATGCTTTAATT	NA	NA	NA	NA
WP_000605384.1|1854911_1856084_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	70.1	5.7e-154
WP_000429451.1|1856415_1857381_-	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	51.1	7.1e-86
WP_000946250.1|1857918_1858206_-	DUF3102 domain-containing protein	NA	A0A286QMZ8	Streptococcus_phage	61.4	1.9e-10
WP_001080841.1|1858217_1858832_-	XRE family transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	68.7	2.6e-17
WP_000359663.1|1859037_1859238_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_001258618.1|1859261_1859864_+	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	47.2	5.1e-42
WP_001021393.1|1860099_1860738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285274.1|1860821_1861013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000916925.1|1861153_1861606_+	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	34.4	2.0e-06
WP_000877495.1|1861694_1862027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000613926.1|1862023_1862218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000174496.1|1862229_1862559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001100458.1|1862561_1862834_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	1.4e-18
WP_001029288.1|1862834_1863704_+	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	71.4	7.7e-116
WP_000838179.1|1863723_1865226_+	DNA primase	NA	Q9AZI5	Lactococcus_phage	36.9	3.5e-63
WP_000173127.1|1865590_1866136_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	57.0	1.2e-26
WP_000891150.1|1866209_1866698_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	58.0	1.2e-49
WP_079260833.1|1866894_1867074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001274639.1|1867101_1867464_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_000038827.1|1867438_1867825_+	ArpU family phage encoded transcriptional regulator	NA	A0A141E173	Streptococcus_phage	33.1	1.2e-07
1868663:1868682	attR	TACAACAAAATGCTTTAATT	NA	NA	NA	NA
