assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001746695.1_ASM174669v1	NZ_CP013677	Xanthomonas oryzae pv. oryzae strain PXO524, complete genome	1	865655-870855	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,RT,csa3,WYL	Type I-U, Type I-U?,Type I-C	GTTTCAATCCACGCGCCCGTGAGGACGCGAC,GTTTCAATCCACGCGCCCGTGAGGACGCGAC,GTTTCAATCCACGCGCCCGTGAGGACGCGAC	31,31,31	0	0	NA	NA	I-C:I-C:I-C	79,79,77	79	TypeI-U,TypeI-U?,TypeI-C	cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,RT,csa3,WYL	NA,NA	NA|374aa|up_9|NZ_CP013677.1_851570_852692_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|218aa|up_8|NZ_CP013677.1_852675_853329_+	pfam10741, T2SSM_b, Type II secretion system (T2SS), protein M subtype b	NA|270aa|up_7|NZ_CP013677.1_853318_854128_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|771aa|up_6|NZ_CP013677.1_854124_856437_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|280aa|up_5|NZ_CP013677.1_856433_857273_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|243aa|up_4|NZ_CP013677.1_857689_858418_-	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR	NA|192aa|up_3|NZ_CP013677.1_858523_859099_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|721aa|up_2|NZ_CP013677.1_859474_861637_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|386aa|up_1|NZ_CP013677.1_861672_862830_-	cd05153, HomoserineK_II, Type II Homoserine Kinase	NA|280aa|up_0|NZ_CP013677.1_863441_864281_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	cas2|97aa|down_0|NZ_CP013677.1_871042_871333_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|345aa|down_1|NZ_CP013677.1_871347_872382_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|211aa|down_2|NZ_CP013677.1_872384_873017_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|289aa|down_3|NZ_CP013677.1_873036_873903_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|615aa|down_4|NZ_CP013677.1_873899_875744_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|225aa|down_5|NZ_CP013677.1_875740_876415_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|764aa|down_6|NZ_CP013677.1_876542_878834_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|322aa|down_7|NZ_CP013677.1_878945_879911_+	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|192aa|down_8|NZ_CP013677.1_880301_880877_-	PRK00884, PRK00884, Maf-like protein; Reviewed	NA|170aa|down_9|NZ_CP013677.1_880989_881499_+	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]
GCF_001746695.1_ASM174669v1	NZ_CP013677	Xanthomonas oryzae pv. oryzae strain PXO524, complete genome	2	4136238-4136410	2	CRISPRCasFinder	no		cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,RT,csa3,WYL	Orphan	CGGCGGTCGTCACGGCGGTCGTC	23	0	0	NA	NA	NA	3	3	Orphan	cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,RT,csa3,WYL	NA|172aa|up_3|NZ_CP013677.1_4131011_4131527_-,NA|90aa|up_0|NZ_CP013677.1_4135611_4135881_+,NA|115aa|down_1|NZ_CP013677.1_4138613_4138958_+	NA|380aa|up_9|NZ_CP013677.1_4125921_4127061_-	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|201aa|up_8|NZ_CP013677.1_4127057_4127660_-	PRK09289, PRK09289, riboflavin synthase	NA|208aa|up_7|NZ_CP013677.1_4128220_4128844_+	TIGR04273, activator_of_XA21-mediated_immunity_Ax21, sulfation-dependent quorum factor, Ax21 family	NA|370aa|up_6|NZ_CP013677.1_4128899_4130009_-	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|162aa|up_5|NZ_CP013677.1_4130005_4130491_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|175aa|up_4|NZ_CP013677.1_4130487_4131012_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|172aa|up_3|NZ_CP013677.1_4131011_4131527_-	NA	NA|418aa|up_2|NZ_CP013677.1_4131540_4132794_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|785aa|up_1|NZ_CP013677.1_4132979_4135334_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|90aa|up_0|NZ_CP013677.1_4135611_4135881_+	NA	NA|554aa|down_0|NZ_CP013677.1_4136777_4138439_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|115aa|down_1|NZ_CP013677.1_4138613_4138958_+	NA	NA|111aa|down_2|NZ_CP013677.1_4138954_4139287_-	pfam14329, DUF4386, Domain of unknown function (DUF4386)	NA|76aa|down_3|NZ_CP013677.1_4139444_4139672_-	pfam14329, DUF4386, Domain of unknown function (DUF4386)	NA|277aa|down_4|NZ_CP013677.1_4139801_4140632_-	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|370aa|down_5|NZ_CP013677.1_4141333_4142443_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|92aa|down_6|NZ_CP013677.1_4142507_4142783_-	cd10153, RcnR-FrmR-like_DUF156, Transcriptional regulators RcnR and FrmR, and related domains; this domain family was previously known as part of DUF156	NA|367aa|down_7|NZ_CP013677.1_4143667_4144768_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|240aa|down_8|NZ_CP013677.1_4144906_4145626_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|500aa|down_9|NZ_CP013677.1_4145622_4147122_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
