assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	1	339472-339567	1	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	GTACGACCGGAAGAGCCAGGTCG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA|134aa|up_0|NZ_CP014693.1_338855_339257_-,NA	NA|299aa|up_9|NZ_CP014693.1_328336_329233_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|156aa|up_8|NZ_CP014693.1_329265_329733_-	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|771aa|up_7|NZ_CP014693.1_329729_332042_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|223aa|up_6|NZ_CP014693.1_332038_332707_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|395aa|up_5|NZ_CP014693.1_332703_333888_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|174aa|up_4|NZ_CP014693.1_334061_334583_+	COG4875, COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown]	NA|170aa|up_3|NZ_CP014693.1_334874_335384_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|315aa|up_2|NZ_CP014693.1_335383_336328_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|808aa|up_1|NZ_CP014693.1_336395_338819_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|134aa|up_0|NZ_CP014693.1_338855_339257_-	NA	NA|160aa|down_0|NZ_CP014693.1_339695_340175_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|188aa|down_1|NZ_CP014693.1_340211_340775_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|448aa|down_2|NZ_CP014693.1_340896_342240_+	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|339aa|down_3|NZ_CP014693.1_342251_343268_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|324aa|down_4|NZ_CP014693.1_343589_344561_+	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|248aa|down_5|NZ_CP014693.1_344594_345338_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|98aa|down_6|NZ_CP014693.1_345339_345633_+	pfam07578, LAB_N, Lipid A Biosynthesis N-terminal domain	NA|492aa|down_7|NZ_CP014693.1_345682_347158_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|555aa|down_8|NZ_CP014693.1_347420_349085_+	cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|254aa|down_9|NZ_CP014693.1_349101_349863_+	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	2	1767156-1767239	2	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	CTGCTCCCACAGGGAATTTGCTGCCACAGGGG	32	1	1	1767188-1767207	NZ_CP014693.1_1767223-1767242	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA,NA|82aa|down_7|NZ_CP014693.1_1777208_1777454_-	NA|115aa|up_9|NZ_CP014693.1_1752702_1753047_-	PRK11702, PRK11702, hypothetical protein; Provisional	NA|489aa|up_8|NZ_CP014693.1_1753278_1754745_+	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane]	NA|795aa|up_7|NZ_CP014693.1_1754978_1757363_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|757aa|up_6|NZ_CP014693.1_1757506_1759777_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|72aa|up_5|NZ_CP014693.1_1760308_1760524_+	pfam04957, RMF, Ribosome modulation factor	NA|340aa|up_4|NZ_CP014693.1_1760813_1761833_-	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|404aa|up_3|NZ_CP014693.1_1762065_1763277_+	pfam13379, NMT1_2, NMT1-like family	NA|192aa|up_2|NZ_CP014693.1_1763291_1763867_+	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]	NA|404aa|up_1|NZ_CP014693.1_1764234_1765446_+	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|557aa|up_0|NZ_CP014693.1_1765455_1767126_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|818aa|down_0|NZ_CP014693.1_1767645_1770099_+	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|106aa|down_1|NZ_CP014693.1_1770095_1770413_+	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain	NA|906aa|down_2|NZ_CP014693.1_1770412_1773130_+	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|252aa|down_3|NZ_CP014693.1_1773140_1773896_+	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase	NA|345aa|down_4|NZ_CP014693.1_1774556_1775591_-	pfam05736, OprF, OprF membrane domain	NA|197aa|down_5|NZ_CP014693.1_1775699_1776290_-	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed	NA|275aa|down_6|NZ_CP014693.1_1776381_1777206_-	pfam05552, TM_helix, Conserved TM helix	NA|82aa|down_7|NZ_CP014693.1_1777208_1777454_-	NA	NA|332aa|down_8|NZ_CP014693.1_1777517_1778513_-	cd12833, ZntB-like_1, Salmonella typhimurium Zn2+ transporter ZntB-like subgroup	NA|164aa|down_9|NZ_CP014693.1_1778538_1779030_-	PRK09372, PRK09372, ribonuclease E inhibitor RraA
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	3	1774029-1774127	3	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	CCAGGCCGGCTGTTAGGCCGCCTCGC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA,NA|82aa|down_3|NZ_CP014693.1_1777208_1777454_-	NA|72aa|up_9|NZ_CP014693.1_1760308_1760524_+	pfam04957, RMF, Ribosome modulation factor	NA|340aa|up_8|NZ_CP014693.1_1760813_1761833_-	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|404aa|up_7|NZ_CP014693.1_1762065_1763277_+	pfam13379, NMT1_2, NMT1-like family	NA|192aa|up_6|NZ_CP014693.1_1763291_1763867_+	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]	NA|404aa|up_5|NZ_CP014693.1_1764234_1765446_+	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|557aa|up_4|NZ_CP014693.1_1765455_1767126_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|818aa|up_3|NZ_CP014693.1_1767645_1770099_+	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|106aa|up_2|NZ_CP014693.1_1770095_1770413_+	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain	NA|906aa|up_1|NZ_CP014693.1_1770412_1773130_+	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|252aa|up_0|NZ_CP014693.1_1773140_1773896_+	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase	NA|345aa|down_0|NZ_CP014693.1_1774556_1775591_-	pfam05736, OprF, OprF membrane domain	NA|197aa|down_1|NZ_CP014693.1_1775699_1776290_-	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed	NA|275aa|down_2|NZ_CP014693.1_1776381_1777206_-	pfam05552, TM_helix, Conserved TM helix	NA|82aa|down_3|NZ_CP014693.1_1777208_1777454_-	NA	NA|332aa|down_4|NZ_CP014693.1_1777517_1778513_-	cd12833, ZntB-like_1, Salmonella typhimurium Zn2+ transporter ZntB-like subgroup	NA|164aa|down_5|NZ_CP014693.1_1778538_1779030_-	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|330aa|down_6|NZ_CP014693.1_1779156_1780146_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|792aa|down_7|NZ_CP014693.1_1780304_1782680_-	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|273aa|down_8|NZ_CP014693.1_1782864_1783683_+	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA|76aa|down_9|NZ_CP014693.1_1783871_1784099_-	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	4	2444194-2444288	4	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	TCGCGAGCAAGCTCGCTCCCACAAT	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA|195aa|up_8|NZ_CP014693.1_2437335_2437920_-,NA|138aa|up_7|NZ_CP014693.1_2439194_2439608_-,NA|118aa|up_0|NZ_CP014693.1_2443727_2444081_+,NA	NA|61aa|up_9|NZ_CP014693.1_2437156_2437339_-	pfam10948, DUF2635, Protein of unknown function (DUF2635)	NA|195aa|up_8|NZ_CP014693.1_2437335_2437920_-	NA	NA|138aa|up_7|NZ_CP014693.1_2439194_2439608_-	NA	NA|272aa|up_6|NZ_CP014693.1_2439748_2440564_-	pfam14859, Colicin_M, Colicin M	NA|105aa|up_5|NZ_CP014693.1_2440565_2440880_-	pfam10122, Mu-like_Com, Mu-like prophage protein Com	NA|117aa|up_4|NZ_CP014693.1_2440788_2441139_-	pfam16085, Phage_holin_3_5, Bacteriophage holin Hol, superfamily III	NA|194aa|up_3|NZ_CP014693.1_2441205_2441787_-	TIGR04362, hypothetical_protein, choice-of-anchor C domain	NA|53aa|up_2|NZ_CP014693.1_2441825_2441984_-	pfam10122, Mu-like_Com, Mu-like prophage protein Com	NA|245aa|up_1|NZ_CP014693.1_2442444_2443179_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|118aa|up_0|NZ_CP014693.1_2443727_2444081_+	NA	NA|856aa|down_0|NZ_CP014693.1_2444834_2447402_+	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|108aa|down_1|NZ_CP014693.1_2447544_2447868_+	pfam11953, DUF3470, Domain of unknown function (DUF3470)	NA|336aa|down_2|NZ_CP014693.1_2449301_2450309_-	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated	NA|282aa|down_3|NZ_CP014693.1_2450415_2451261_-	PRK10871, nlpD, murein hydrolase activator NlpD	NA|212aa|down_4|NZ_CP014693.1_2451472_2452108_-	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|250aa|down_5|NZ_CP014693.1_2452149_2452899_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|353aa|down_6|NZ_CP014693.1_2452886_2453945_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|158aa|down_7|NZ_CP014693.1_2453941_2454415_-	pfam02542, YgbB, YgbB family	NA|282aa|down_8|NZ_CP014693.1_2454458_2455304_-	PLN02442, PLN02442, S-formylglutathione hydrolase	NA|371aa|down_9|NZ_CP014693.1_2455312_2456425_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	5	2555794-2555926	5	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	CAGGCCGGCTGTCGGGCCGCCTCGCGAGCAAGCTTTGCTCCCACA	45	1	2	2555839-2555881|2555839-2555881	NZ_CP014693.1_2770220-2770262|NZ_CP014693.1_4309435-4309477	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA|62aa|up_5|NZ_CP014693.1_2548224_2548410_-,NA	NA|273aa|up_9|NZ_CP014693.1_2545127_2545946_+	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|475aa|up_8|NZ_CP014693.1_2546093_2547518_+	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase	NA|88aa|up_7|NZ_CP014693.1_2547653_2547917_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|100aa|up_6|NZ_CP014693.1_2547879_2548179_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|62aa|up_5|NZ_CP014693.1_2548224_2548410_-	NA	NA|543aa|up_4|NZ_CP014693.1_2548771_2550400_+	PRK13273, mdoD, glucan biosynthesis protein D; Provisional	NA|369aa|up_3|NZ_CP014693.1_2550602_2551709_-	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain	NA|570aa|up_2|NZ_CP014693.1_2551956_2553666_-	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|181aa|up_1|NZ_CP014693.1_2553755_2554298_-	pfam07152, YaeQ, YaeQ protein	NA|400aa|up_0|NZ_CP014693.1_2554445_2555645_+	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|96aa|down_0|NZ_CP014693.1_2556128_2556416_-	pfam12021, DUF3509, Protein of unknown function (DUF3509)	NA|457aa|down_1|NZ_CP014693.1_2556600_2557971_-	cd13707, PBP2_BvgS_D2, The second of the two tandem periplasmic domains of sensor-kinase BvgS; the type 2 peripasmic-binding fold protein	NA|470aa|down_2|NZ_CP014693.1_2558091_2559501_-	PRK09225, PRK09225, threonine synthase; Validated	NA|435aa|down_3|NZ_CP014693.1_2559606_2560911_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|244aa|down_4|NZ_CP014693.1_2561043_2561775_-	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional	NA|299aa|down_5|NZ_CP014693.1_2562060_2562957_-	PRK00283, xerD, tyrosine recombinase	NA|117aa|down_6|NZ_CP014693.1_2563090_2563441_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|258aa|down_7|NZ_CP014693.1_2563486_2564260_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|179aa|down_8|NZ_CP014693.1_2564241_2564778_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|84aa|down_9|NZ_CP014693.1_2564783_2565035_-	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	6	3136437-3136532	6	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	ACAGCCGACCTGGCTCTCCCGGT	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA|587aa|up_8|NZ_CP014693.1_3123751_3125512_+,NA|120aa|down_0|NZ_CP014693.1_3136586_3136946_-	NA|287aa|up_9|NZ_CP014693.1_3122693_3123554_+	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed	NA|587aa|up_8|NZ_CP014693.1_3123751_3125512_+	NA	NA|405aa|up_7|NZ_CP014693.1_3125673_3126888_-	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|506aa|up_6|NZ_CP014693.1_3127021_3128539_+	COG3726, AhpA, Uncharacterized membrane protein affecting hemolysin expression [General function prediction only]	NA|235aa|up_5|NZ_CP014693.1_3128776_3129481_-	pfam03886, ABC_trans_aux, ABC-type transport auxiliary lipoprotein component	NA|755aa|up_4|NZ_CP014693.1_3129660_3131925_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|174aa|up_3|NZ_CP014693.1_3131935_3132457_-	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|329aa|up_2|NZ_CP014693.1_3132453_3133440_-	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|635aa|up_1|NZ_CP014693.1_3133439_3135344_-	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|203aa|up_0|NZ_CP014693.1_3135386_3135995_-	COG3150, COG3150, Predicted esterase [General function prediction only]	NA|120aa|down_0|NZ_CP014693.1_3136586_3136946_-	NA	NA|272aa|down_1|NZ_CP014693.1_3137439_3138255_-	PRK11148, PRK11148, cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional	NA|151aa|down_2|NZ_CP014693.1_3138354_3138807_-	COG3151, COG3151, Uncharacterized protein conserved in bacteria [Function unknown]	NA|206aa|down_3|NZ_CP014693.1_3138797_3139415_-	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional	NA|249aa|down_4|NZ_CP014693.1_3139629_3140376_+	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|431aa|down_5|NZ_CP014693.1_3140344_3141637_-	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX	NA|630aa|down_6|NZ_CP014693.1_3141808_3143698_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|480aa|down_7|NZ_CP014693.1_3144153_3145593_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|427aa|down_8|NZ_CP014693.1_3145631_3146912_-	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	NA|297aa|down_9|NZ_CP014693.1_3146934_3147825_-	COG0583, LysR, Transcriptional regulator [Transcription]
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	7	3544617-3544756	7	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	GTCCTGCTCAAACAGATCTGACGGGTGTACGACCGGGAGAGCCAGGTCGGCT	52	1	19	3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704|3544669-3544704	NZ_CP014693.1_4266339-4266304|NZ_CP014693.1_4794717-4794682|NZ_CP014693.1_5184720-5184685|NZ_CP014693.1_5684435-5684400|NZ_CP014693.1_6545621-6545586|NZ_CP014693.1_2772315-2772350|NZ_CP014693.1_4309488-4309523|NZ_CP014693.1_4638533-4638568|NZ_CP014693.1_5185544-5185579|NZ_CP014693.1_5999975-6000010|NZ_CP014693.1_5684347-5684312|NZ_CP014693.1_6248705-6248670|NZ_CP014693.1_6248778-6248743|NZ_CP014693.1_87597-87632|NZ_CP014693.1_2770185-2770220|NZ_CP014693.1_4309400-4309435|NZ_CP014693.1_4339161-4339196|NZ_CP014693.1_4339233-4339268|NZ_CP014693.1_5888525-5888560	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA|48aa|up_5|NZ_CP014693.1_3526687_3526831_+,NA|113aa|up_3|NZ_CP014693.1_3541327_3541666_+,NA|115aa|up_2|NZ_CP014693.1_3541817_3542162_-,NA|63aa|up_0|NZ_CP014693.1_3544173_3544362_+,NA	NA|301aa|up_9|NZ_CP014693.1_3520500_3521403_-	COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|456aa|up_8|NZ_CP014693.1_3521788_3523156_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|719aa|up_7|NZ_CP014693.1_3523145_3525302_-	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|450aa|up_6|NZ_CP014693.1_3525339_3526689_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|48aa|up_5|NZ_CP014693.1_3526687_3526831_+	NA	NA|4713aa|up_4|NZ_CP014693.1_3527047_3541186_+	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|113aa|up_3|NZ_CP014693.1_3541327_3541666_+	NA	NA|115aa|up_2|NZ_CP014693.1_3541817_3542162_-	NA	NA|477aa|up_1|NZ_CP014693.1_3542744_3544175_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|63aa|up_0|NZ_CP014693.1_3544173_3544362_+	NA	NA|649aa|down_0|NZ_CP014693.1_3544961_3546908_-	cd01948, EAL, EAL domain	NA|231aa|down_1|NZ_CP014693.1_3546922_3547615_-	COG3672, COG3672, Predicted transglutaminase-like cysteine proteinase [General    function prediction only]	NA|231aa|down_2|NZ_CP014693.1_3547815_3548508_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|259aa|down_3|NZ_CP014693.1_3549192_3549969_+	pfam11251, DUF3050, Protein of unknown function (DUF3050)	NA|311aa|down_4|NZ_CP014693.1_3549965_3550898_+	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|1180aa|down_5|NZ_CP014693.1_3550908_3554448_+	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	NA|157aa|down_6|NZ_CP014693.1_3554480_3554951_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|627aa|down_7|NZ_CP014693.1_3555181_3557062_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|167aa|down_8|NZ_CP014693.1_3557315_3557816_+	PRK09651, PRK09651, RNA polymerase sigma factor FecI; Provisional	NA|334aa|down_9|NZ_CP014693.1_3557805_3558807_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	8	4198219-4198317	8	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	AGCCGACCTGGCTCTCCCGGTCGTAC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA|168aa|up_6|NZ_CP014693.1_4193253_4193757_+,NA|126aa|up_4|NZ_CP014693.1_4194407_4194785_-,NA|70aa|up_3|NZ_CP014693.1_4194791_4195001_-,NA|197aa|down_1|NZ_CP014693.1_4199006_4199597_-,NA|70aa|down_5|NZ_CP014693.1_4201919_4202129_-,NA|192aa|down_7|NZ_CP014693.1_4203550_4204126_-	NA|85aa|up_9|NZ_CP014693.1_4190968_4191223_+	TIGR01403, Secretion_system_apparatus_protein_SsaS, type III secretion protein, HrpO family	NA|266aa|up_8|NZ_CP014693.1_4191222_4192020_+	TIGR01401, Secretion_system_apparatus_protein_SsaT, type III secretion protein SpaR/YscT/HrcT	NA|367aa|up_7|NZ_CP014693.1_4192035_4193136_+	TIGR01404, Surface_presentation_of_antigens_protein_SpaS, type III secretion protein, YscU/HrpY family	NA|168aa|up_6|NZ_CP014693.1_4193253_4193757_+	NA	NA|150aa|up_5|NZ_CP014693.1_4193912_4194362_-	cd17024, T3SC_IA_DspF-like, Class IA type III secretion system chaperone protein, similar to Erwinia amylovora DspF (DspF/AvrF family protein)	NA|126aa|up_4|NZ_CP014693.1_4194407_4194785_-	NA	NA|70aa|up_3|NZ_CP014693.1_4194791_4195001_-	NA	NA|717aa|up_2|NZ_CP014693.1_4194997_4197148_-	TIGR02516, type_III_yscC, type III secretion outer membrane pore, YscC/HrcC family	NA|146aa|up_1|NZ_CP014693.1_4197140_4197578_-	cd16364, T3SC_I_like, class I type III secretion system (T3SS) chaperones and similar proteins	NA|75aa|up_0|NZ_CP014693.1_4197564_4197789_-	pfam06266, HrpF, HrpF protein	NA|198aa|down_0|NZ_CP014693.1_4198435_4199029_-	pfam06188, HrpE, HrpE/YscL/FliH and V-type ATPase subunit E	NA|197aa|down_1|NZ_CP014693.1_4199006_4199597_-	NA	NA|296aa|down_2|NZ_CP014693.1_4199593_4200481_-	TIGR02544, YOP_proteins_translocation_lipoprotein, type III secretion apparatus lipoprotein, YscJ/HrcJ family	NA|125aa|down_3|NZ_CP014693.1_4200495_4200870_-	pfam17001, T3SS_basalb_I, Type III secretion basal body protein I, YscI, HrpB, PscI	NA|310aa|down_4|NZ_CP014693.1_4200929_4201859_-	pfam04877, Hairpins, HrpZ	NA|70aa|down_5|NZ_CP014693.1_4201919_4202129_-	NA	NA|308aa|down_6|NZ_CP014693.1_4202222_4203146_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|192aa|down_7|NZ_CP014693.1_4203550_4204126_-	NA	NA|316aa|down_8|NZ_CP014693.1_4204234_4205182_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|248aa|down_9|NZ_CP014693.1_4205278_4206022_-	pfam09832, DUF2059, Uncharacterized protein conserved in bacteria (DUF2059)
GCF_001746815.1_ASM174681v1	NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	9	6671729-6671823	9	CRISPRCasFinder	no		WYL,DinG,csa3,cas3,DEDDh,PD-DExK	Orphan	TCGCGAGCAAGCTCGCTCCCACAG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,cas3,DEDDh,PD-DExK	NA,NA|110aa|down_4|NZ_CP014693.1_6675979_6676309_+	NA|193aa|up_9|NZ_CP014693.1_6645229_6645808_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|787aa|up_8|NZ_CP014693.1_6645804_6648165_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|473aa|up_7|NZ_CP014693.1_6648304_6649723_+	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|404aa|up_6|NZ_CP014693.1_6649722_6650934_+	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|392aa|up_5|NZ_CP014693.1_6651362_6652538_+	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily	NA|4208aa|up_4|NZ_CP014693.1_6652749_6665373_+	pfam12545, DUF3739, Filamentous haemagglutinin family outer membrane protein	NA|858aa|up_3|NZ_CP014693.1_6665521_6668095_-	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|227aa|up_2|NZ_CP014693.1_6668208_6668889_-	pfam09997, DUF2238, Predicted membrane protein (DUF2238)	NA|600aa|up_1|NZ_CP014693.1_6668900_6670700_-	PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional	NA|214aa|up_0|NZ_CP014693.1_6670843_6671485_-	COG2717, COG2717, Predicted membrane protein [Function unknown]	NA|437aa|down_0|NZ_CP014693.1_6671831_6673142_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|247aa|down_1|NZ_CP014693.1_6673138_6673879_-	PRK09468, ompR, osmolarity response regulator; Provisional	NA|88aa|down_2|NZ_CP014693.1_6674102_6674366_+	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|404aa|down_3|NZ_CP014693.1_6674545_6675757_+	cd03012, TlpA_like_DipZ_like, TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain	NA|110aa|down_4|NZ_CP014693.1_6675979_6676309_+	NA	NA|622aa|down_5|NZ_CP014693.1_6676313_6678179_-	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|358aa|down_6|NZ_CP014693.1_6678521_6679595_+	COG3199, COG3199, Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]	NA|326aa|down_7|NZ_CP014693.1_6679597_6680575_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|339aa|down_8|NZ_CP014693.1_6680611_6681628_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|371aa|down_9|NZ_CP014693.1_6681627_6682740_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
