The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015930	Legionella pneumophila strain Philadelphia_3 chromosome, complete genome	3409009	923872	930712	3409009		Acinetobacter_phage(42.86%)	9	NA	NA
WP_010946569.1|923872_924649_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	48.2	3.3e-57
WP_010946570.1|924641_925676_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	3.5e-75
WP_010946571.1|925653_926232_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.0e-55
WP_010946572.1|926265_926991_-	LPS export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.3	3.1e-17
WP_010946573.1|926987_927497_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010946574.1|927477_928047_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_011213328.1|928043_928571_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
WP_010946576.1|928584_929547_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
WP_010946577.1|929914_930712_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-21
>prophage 2
NZ_CP015930	Legionella pneumophila strain Philadelphia_3 chromosome, complete genome	3409009	1313343	1319280	3409009		Staphylococcus_phage(50.0%)	6	NA	NA
WP_010946911.1|1313343_1314417_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	27.8	2.8e-30
WP_010946912.1|1314401_1315016_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	38.4	3.5e-22
WP_010946913.1|1315012_1316221_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.7	5.4e-99
WP_010946914.1|1316228_1316696_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
WP_010946915.1|1316821_1318459_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.3	3.6e-154
WP_010946916.1|1318455_1319280_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 3
NZ_CP015930	Legionella pneumophila strain Philadelphia_3 chromosome, complete genome	3409009	2268295	2278419	3409009		Bacillus_phage(16.67%)	7	NA	NA
WP_010947735.1|2268295_2269984_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	30.4	8.0e-16
WP_015444337.1|2270115_2271123_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010947737.1|2271246_2272572_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	1.4e-47
WP_010947738.1|2272590_2273739_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	58.5	1.3e-126
WP_015444336.1|2273947_2275060_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	2.9e-51
WP_010947740.1|2275155_2276295_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
WP_015444335.1|2276484_2278419_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
>prophage 4
NZ_CP015930	Legionella pneumophila strain Philadelphia_3 chromosome, complete genome	3409009	2320247	2375272	3409009	transposase	Wolbachia_phage(25.0%)	53	NA	NA
WP_010947782.1|2320247_2321699_+|transposase	IS4-like element ISLpn5 family transposase	transposase	Q9JMP3	Wolbachia_phage	56.8	6.1e-158
WP_010947783.1|2321769_2323290_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	48.2	7.9e-124
WP_010947785.1|2324137_2324512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947786.1|2324709_2326317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444248.1|2326319_2326811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947788.1|2326821_2327658_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	48.9	4.9e-67
WP_010947789.1|2328250_2329342_-	DUF4917 family protein	NA	NA	NA	NA	NA
WP_027223819.1|2329573_2335519_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
WP_010947791.1|2335539_2337432_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_021437030.1|2337496_2337961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015444244.1|2337964_2340685_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010947793.1|2340690_2342076_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_010947794.1|2342072_2342495_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
WP_010947795.1|2342484_2343267_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
WP_010947796.1|2343259_2345071_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
WP_015444243.1|2345070_2345739_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_010947798.1|2345754_2346750_-	TraU family protein	NA	NA	NA	NA	NA
WP_010947799.1|2346746_2347355_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_015444242.1|2347351_2347687_-	TrbI F-type domain-containing protein	NA	NA	NA	NA	NA
WP_015444241.1|2347679_2350232_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_010947801.1|2350243_2350594_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_015444240.1|2350607_2351894_-	TraB/VirB10 family protein	NA	NA	NA	NA	NA
WP_010947803.1|2351895_2352609_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
WP_010947804.1|2352611_2353175_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA	NA
WP_010947805.1|2353178_2353472_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_010947806.1|2353473_2353776_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010947807.1|2353790_2354027_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	52.9	2.5e-08
WP_025520140.1|2354040_2354418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947808.1|2354365_2355250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444237.1|2355422_2356103_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	28.1	1.6e-07
WP_016356978.1|2356251_2356926_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947811.1|2357374_2357947_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_015444236.1|2357930_2358428_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947813.1|2358420_2359008_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_010947814.1|2359012_2361148_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010947815.1|2361166_2362048_-	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_010947816.1|2362154_2362301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947817.1|2362492_2362669_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010947818.1|2362838_2363336_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010947819.1|2363325_2364105_-	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
WP_010947820.1|2364097_2364952_-	DUF692 domain-containing protein	NA	NA	NA	NA	NA
WP_010947821.1|2364966_2365260_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
WP_010947822.1|2365449_2365971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444234.1|2366275_2366734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444232.1|2367307_2367535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947824.1|2367692_2368214_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947825.1|2368385_2368940_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010947826.1|2369373_2369574_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_010947827.1|2369667_2370051_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947828.1|2370104_2371058_-	Abi family protein	NA	A3QSC6	Clostridium_virus	31.8	4.8e-34
WP_015444229.1|2371567_2372986_+|transposase	IS4-like element ISLpn3 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.9	2.3e-56
WP_010947829.1|2373018_2374194_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	21.2	5.2e-14
WP_010947830.1|2374246_2375272_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
