The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015956	Legionella pneumophila strain E9_O chromosome, complete genome	3367205	873078	917720	3367205	transposase,tRNA,protease	Pseudomonas_phage(22.22%)	37	NA	NA
WP_011213315.1|873078_874374_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_126297583.1|874412_874628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010946524.1|874723_875260_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011213316.1|875598_876765_+	DUF1574 family protein	NA	NA	NA	NA	NA
WP_010946526.1|876761_878204_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	40.5	3.9e-72
WP_010947893.1|878295_879702_+|transposase	IS4-like element ISLpn6 family transposase	transposase	Q9JMP3	Wolbachia_phage	34.1	1.0e-72
WP_010946527.1|879802_881179_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_011213317.1|881383_882085_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_011213318.1|882250_883510_+	MFS transporter	NA	NA	NA	NA	NA
WP_011213319.1|885364_886015_+	lpg0796 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_010946534.1|886294_886681_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
WP_010946535.1|886784_888128_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_010946536.1|888202_889852_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_010946537.1|889848_891219_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	49.7	2.2e-112
WP_010946538.1|891371_893075_+	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	26.5	6.5e-42
WP_010946539.1|893277_894981_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010946540.1|895210_896209_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_010946541.1|896433_898821_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	38.1	7.0e-175
WP_010946542.1|899062_900502_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_010946543.1|900498_901341_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_010946544.1|901337_902429_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_010946545.1|902403_903819_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010946546.1|903910_904228_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011213320.1|904423_905461_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_010946548.1|905438_906347_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_010946549.1|906343_906823_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_011213321.1|906758_907361_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_010946551.1|907621_908320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011213322.1|908429_909686_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	74.1	1.9e-14
WP_010946553.1|910087_910423_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	36.5	5.8e-11
WP_011213323.1|910454_912722_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	8.7e-167
WP_010946555.1|913022_914108_+|transposase	IS4-like element ISLpn9 family transposase	transposase	NA	NA	NA	NA
WP_010946556.1|914133_914427_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_010946557.1|914582_915362_+	glycosyltransferase family 2 protein	NA	S5WBE2	Pseudomonas_phage	30.8	6.9e-07
WP_010946558.1|915364_916615_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_011213324.1|916615_916951_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010946560.1|917120_917720_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 2
NZ_CP015956	Legionella pneumophila strain E9_O chromosome, complete genome	3367205	928048	934888	3367205		Acinetobacter_phage(42.86%)	9	NA	NA
WP_010946569.1|928048_928825_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	48.2	3.3e-57
WP_010946570.1|928817_929852_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	3.5e-75
WP_010946571.1|929829_930408_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.0e-55
WP_010946572.1|930441_931167_-	LPS export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.3	3.1e-17
WP_010946573.1|931163_931673_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010946574.1|931653_932223_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_011213328.1|932219_932747_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
WP_010946576.1|932760_933723_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
WP_010946577.1|934090_934888_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-21
>prophage 3
NZ_CP015956	Legionella pneumophila strain E9_O chromosome, complete genome	3367205	1317616	1323553	3367205		Staphylococcus_phage(50.0%)	6	NA	NA
WP_010946911.1|1317616_1318690_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	27.8	2.8e-30
WP_010946912.1|1318674_1319289_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	38.4	3.5e-22
WP_010946913.1|1319285_1320494_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.7	5.4e-99
WP_010946914.1|1320501_1320969_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
WP_010946915.1|1321094_1322732_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.3	3.6e-154
WP_010946916.1|1322728_1323553_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 4
NZ_CP015956	Legionella pneumophila strain E9_O chromosome, complete genome	3367205	2227090	2237214	3367205		Bacillus_phage(16.67%)	7	NA	NA
WP_010947735.1|2227090_2228779_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	30.4	8.0e-16
WP_015444337.1|2228910_2229918_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010947737.1|2230041_2231367_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	1.4e-47
WP_010947738.1|2231385_2232534_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	58.5	1.3e-126
WP_015444336.1|2232742_2233855_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	2.9e-51
WP_010947740.1|2233950_2235090_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
WP_015444335.1|2235279_2237214_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
>prophage 5
NZ_CP015956	Legionella pneumophila strain E9_O chromosome, complete genome	3367205	2279045	2334070	3367205	transposase	Wolbachia_phage(25.0%)	53	NA	NA
WP_010947782.1|2279045_2280497_+|transposase	IS4-like element ISLpn5 family transposase	transposase	Q9JMP3	Wolbachia_phage	56.8	6.1e-158
WP_010947783.1|2280567_2282088_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	48.2	7.9e-124
WP_010947785.1|2282935_2283310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010947786.1|2283507_2285115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444248.1|2285117_2285609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947788.1|2285619_2286456_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	48.9	4.9e-67
WP_010947789.1|2287048_2288140_-	DUF4917 family protein	NA	NA	NA	NA	NA
WP_010947790.1|2288371_2294317_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
WP_010947791.1|2294337_2296230_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_021437030.1|2296294_2296759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015444244.1|2296762_2299483_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010947793.1|2299488_2300874_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_010947794.1|2300870_2301293_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
WP_010947795.1|2301282_2302065_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
WP_010947796.1|2302057_2303869_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
WP_015444243.1|2303868_2304537_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_010947798.1|2304552_2305548_-	TraU family protein	NA	NA	NA	NA	NA
WP_010947799.1|2305544_2306153_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_015444242.1|2306149_2306485_-	TrbI F-type domain-containing protein	NA	NA	NA	NA	NA
WP_015444241.1|2306477_2309030_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_010947801.1|2309041_2309392_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_015444240.1|2309405_2310692_-	TraB/VirB10 family protein	NA	NA	NA	NA	NA
WP_010947803.1|2310693_2311407_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
WP_010947804.1|2311409_2311973_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA	NA
WP_010947805.1|2311976_2312270_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_010947806.1|2312271_2312574_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010947807.1|2312588_2312825_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	52.9	2.5e-08
WP_025520140.1|2312838_2313216_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947808.1|2313163_2314048_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444237.1|2314220_2314901_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	28.1	1.6e-07
WP_016356978.1|2315049_2315724_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947811.1|2316172_2316745_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_015444236.1|2316728_2317226_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947813.1|2317218_2317806_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_010947814.1|2317810_2319946_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010947815.1|2319964_2320846_-	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_010947816.1|2320952_2321099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947817.1|2321290_2321467_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010947818.1|2321636_2322134_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010947819.1|2322123_2322903_-	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
WP_010947820.1|2322895_2323750_-	DUF692 domain-containing protein	NA	NA	NA	NA	NA
WP_010947821.1|2323764_2324058_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
WP_010947822.1|2324247_2324769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444234.1|2325073_2325532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015444232.1|2326105_2326333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010947824.1|2326490_2327012_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_010947825.1|2327183_2327738_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010947826.1|2328171_2328372_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_010947827.1|2328465_2328849_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010947828.1|2328902_2329856_-	Abi family protein	NA	A3QSC6	Clostridium_virus	31.8	4.8e-34
WP_015444229.1|2330365_2331784_+|transposase	IS4-like element ISLpn3 family transposase	transposase	Q9JMP3	Wolbachia_phage	32.9	2.3e-56
WP_010947829.1|2331816_2332992_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	21.2	5.2e-14
WP_010947830.1|2333044_2334070_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
