The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017961	Pasteurella multocida strain Razi_Pm0001, complete genome	2360663	68130	124309	2360663	plate,tRNA,head,tail,transposase	Shigella_phage(29.03%)	62	NA	NA
WP_005751773.1|68130_70086_-|tRNA	tRNA(Met) cytidine acetyltransferase	tRNA	NA	NA	NA	NA
WP_005751774.1|70104_70833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005751775.1|70950_71427_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_005751777.1|71427_72546_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.2	1.2e-47
WP_005751778.1|72739_73570_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_005751779.1|73627_75901_-	bifunctional glutamate--cysteine ligase/glutathione synthetase	NA	NA	NA	NA	NA
WP_005751780.1|76046_76955_-	DMT family transporter	NA	NA	NA	NA	NA
WP_005751781.1|76965_77979_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_005751782.1|78085_78982_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005751784.1|79156_79624_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
WP_005723197.1|79674_80856_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_005717368.1|80893_81400_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_005751786.1|81573_82053_-	DedA family protein	NA	NA	NA	NA	NA
WP_005717370.1|82045_82657_-	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_005751787.1|82662_83262_-	beta-phosphoglucomutase family hydrolase	NA	NA	NA	NA	NA
WP_005733288.1|83385_83766_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_005717374.1|86402_86624_-	YceK/YidQ family lipoprotein	NA	NA	NA	NA	NA
WP_071543600.1|88846_90004_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_016534216.1|90046_90568_+	MltR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005739261.1|90684_91032_+	DUF3486 family protein	NA	NA	NA	NA	NA
WP_005752524.1|91163_91709_-	DNA-binding protein	NA	Q38013	Pseudomonas_phage	41.7	4.5e-05
WP_005752523.1|91906_92122_+	DNA-binding protein	NA	A0A2I7S995	Vibrio_phage	60.6	7.2e-15
WP_005752521.1|92141_94133_+|transposase	transposase	transposase	C9DGL1	Escherichia_phage	44.3	3.0e-147
WP_005752519.1|94351_94828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005752517.1|95783_96101_+	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	45.2	2.0e-13
WP_005752515.1|96125_96650_+	host-nuclease inhibitor protein Gam	NA	F6MIJ0	Haemophilus_phage	93.0	1.2e-82
WP_005752514.1|96649_96844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005752513.1|96912_97131_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005752512.1|97130_97316_+	hypothetical protein	NA	F6MIJ2	Haemophilus_phage	96.4	6.4e-20
WP_005752510.1|97526_98075_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_005752508.1|98061_98616_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	54.1	9.2e-46
WP_071543601.1|98819_99248_+	transcriptional regulator	NA	A0A0C4UQZ9	Shigella_phage	43.9	2.5e-22
WP_005752505.1|99330_99876_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	75.4	9.6e-80
WP_005752503.1|99878_100097_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	88.4	9.2e-26
WP_005738312.1|100099_100372_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_005738314.1|100500_100728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005752500.1|100724_101054_+	DUF2730 family protein	NA	NA	NA	NA	NA
WP_005752497.1|101050_101344_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	65.6	1.4e-24
WP_005752496.1|101377_101947_+	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	45.4	6.5e-39
WP_100248327.1|101943_103467_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.8	2.1e-161
WP_021734325.1|103469_105029_+	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	52.8	7.6e-146
WP_100248329.1|105102_106347_+|head	phage head morphogenesis protein	head	C9DGN7	Escherichia_phage	40.6	2.5e-83
WP_005752491.1|106491_106926_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_005752489.1|107155_108220_+	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	48.9	1.3e-72
WP_005752488.1|108219_109143_+|head	head protein	head	A0A0C4UQR9	Shigella_phage	55.4	3.4e-93
WP_005752486.1|109215_109635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100248326.1|109631_110054_+	DUF1320 domain-containing protein	NA	NA	NA	NA	NA
WP_005738156.1|110615_110807_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_005752482.1|110806_112270_+|tail	tail protein	tail	A0A0C4UQS0	Shigella_phage	50.2	2.0e-124
WP_005752480.1|112280_112634_+|tail	tail protein	tail	A0A2P1A4D6	Alteromonadaceae_phage	32.7	1.7e-08
WP_005752478.1|112636_113020_+	hypothetical protein	NA	C9DGP9	Escherichia_phage	51.3	2.7e-20
WP_005752477.1|113109_115011_+	tape measure domain-containing protein	NA	A0A2I7S9D9	Vibrio_phage	33.6	1.7e-51
WP_005752475.1|115020_116385_+	DNA circularization protein	NA	A0A0C4UR32	Shigella_phage	27.9	8.1e-35
WP_016534010.1|117155_117635_+|tail	tail protein gpP	tail	M4M9L5	Vibrio_phage	38.1	1.4e-13
WP_005737833.1|117666_118215_+|plate	phage baseplate assembly protein V	plate	A0A0C4UQZ3	Shigella_phage	40.7	1.7e-31
WP_005752473.1|118225_118636_+	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	38.7	3.5e-18
WP_005752471.1|118635_119703_+|plate	baseplate J/gp47 family protein	plate	A0A0C4UQU9	Shigella_phage	43.1	1.2e-70
WP_100248328.1|119735_120293_+	YmfQ family protein	NA	A0A2I7S9L6	Vibrio_phage	34.6	4.2e-22
WP_005752467.1|120295_122515_+	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	33.1	5.1e-87
WP_005752465.1|122517_123066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005752464.1|123044_123329_+	hypothetical protein	NA	A0A0M3LNN9	Mannheimia_phage	64.9	1.4e-21
WP_030017229.1|124051_124309_-	hypothetical protein	NA	F6MIM3	Haemophilus_phage	98.8	3.5e-40
>prophage 2
NZ_CP017961	Pasteurella multocida strain Razi_Pm0001, complete genome	2360663	273171	334412	2360663	tRNA,head,terminase,integrase,portal,tail,capsid,protease	uncultured_Caudovirales_phage(35.29%)	58	297814:297829	324669:324684
WP_005723679.1|273171_275754_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	41.9	5.9e-188
WP_005751897.1|275809_276313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005751898.1|276312_277392_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_005717609.1|277520_277787_+	DUF5339 domain-containing protein	NA	NA	NA	NA	NA
WP_005751899.1|277852_278254_-	8-oxo-dGTP diphosphatase MutT	NA	NA	NA	NA	NA
WP_005751900.1|278346_281034_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_005723689.1|281117_281429_-	DUF2547 family protein	NA	NA	NA	NA	NA
WP_005723691.1|281521_281827_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_005723696.1|281873_282779_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	48.9	1.8e-62
WP_005751902.1|282782_283871_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_005717623.1|283887_284415_-	shikimate kinase AroK	NA	NA	NA	NA	NA
WP_016533996.1|284597_285932_-	type IV pilus secretin PilQ	NA	NA	NA	NA	NA
WP_005748555.1|285941_286304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005751903.1|286306_286831_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005751904.1|286830_287346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005734313.1|287385_288159_-	competence protein ComA	NA	NA	NA	NA	NA
WP_005751906.1|290886_292299_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005751907.1|292409_293297_+	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_005723715.1|293299_293881_+	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_005723717.1|294041_294887_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_005748588.1|294983_296339_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_017351019.1|296426_297005_-	thymidine kinase	NA	A0A1Z1LZ42	Serratia_phage	52.1	1.8e-52
WP_005734335.1|297006_297243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005751909.1|297263_298295_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.3	2.3e-111
297814:297829	attL	GCATCATCAATTGATT	NA	NA	NA	NA
WP_005717672.1|298513_298729_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_005751910.1|298844_300593_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	32.6	1.1e-41
WP_005751911.1|300668_302537_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.8	4.5e-36
WP_021734338.1|302632_304639_-	transketolase	NA	NA	NA	NA	NA
WP_005752180.1|304666_305617_-	transaldolase	NA	A0A127KNC6	Cyanophage	26.5	6.3e-10
WP_016534207.1|305634_306684_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_005718518.1|306696_307368_-	cyclase family protein	NA	NA	NA	NA	NA
WP_005718519.1|308670_309147_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_005718520.1|309200_310178_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005718521.1|310226_310682_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_005752183.1|311648_312509_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
WP_014668511.1|312687_313314_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA	NA
WP_005718532.1|313315_314320_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
WP_005718533.1|314340_315354_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_016534272.1|315706_316696_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_016534271.1|316719_317280_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_005752188.1|317276_318557_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_017350204.1|319130_320330_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1V0E8G8	Vibrio_phage	40.6	1.7e-84
WP_005752837.1|320505_322110_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	38.0	2.4e-70
WP_016534279.1|322093_322519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016534278.1|322837_323053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005752851.1|323045_323264_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_005752847.1|323749_323953_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_005752845.1|324106_324700_-	hypothetical protein	NA	NA	NA	NA	NA
324669:324684	attR	GCATCATCAATTGATT	NA	NA	NA	NA
WP_016534138.1|324902_325367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016534137.1|325378_327046_-|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	70.3	5.8e-245
WP_005737917.1|327045_327414_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	63.4	3.3e-36
WP_016534136.1|327588_330318_-	tape measure protein	NA	A0A0M3LS69	Mannheimia_phage	39.1	1.1e-179
WP_005737945.1|330375_330732_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	50.9	1.2e-27
WP_005737947.1|330740_331067_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_005753109.1|331053_331401_-|head	phage head closure protein	head	A0A286S2A2	Klebsiella_phage	39.1	5.6e-09
WP_016534135.1|331393_332605_-|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	62.0	1.6e-143
WP_005752727.1|332606_333161_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	61.0	5.4e-54
WP_005752729.1|333212_334412_-|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	61.9	2.5e-128
>prophage 3
NZ_CP017961	Pasteurella multocida strain Razi_Pm0001, complete genome	2360663	1399818	1409178	2360663		Planktothrix_phage(16.67%)	9	NA	NA
WP_005721071.1|1399818_1400817_+	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	2.3e-15
WP_005751181.1|1400833_1401814_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.9	1.0e-15
WP_005724066.1|1401892_1402678_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_005728339.1|1402686_1403478_-	zinc ABC transporter ATP-binding protein ZnuC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.7	3.4e-17
WP_005751182.1|1403712_1405266_+	murein DD-endopeptidase MepM	NA	A0A2K9VGT1	Pontimonas_phage	49.6	1.9e-19
WP_005751184.1|1405341_1406289_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.4	3.3e-43
WP_005724298.1|1406358_1407246_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_005751185.1|1407245_1407863_-	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_005751186.1|1407903_1409178_-	multifunctional CCA addition/repair protein	NA	A0A0F6YPT7	Sinorhizobium_phage	49.1	8.8e-92
