assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001886395.1_ASM188639v1	NZ_CP018024	Alteromonas mediterranea strain CP48 chromosome, complete genome	1	892363-893831	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3,DEDDh,Cas9_archaeal,csa3,DinG	Unclear	GTTCATGGCCGCACAGGCCACTTAGAAA,GTTCATGGCCGCACAGGCCACTTAGAAA,GTTCATGGCCGCACAGGCCACTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	24,24,24	24	Unclear	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3,DEDDh,Cas9_archaeal,csa3,DinG,csf2gr7,cas6e,RT,c2c9_V-U4,Cas14b_CAS-V-F	NA|399aa|up_6|NZ_CP018024.1_882952_884149_-,cas7f|325aa|up_2|NZ_CP018024.1_889652_890627_+,cas5|346aa|up_1|NZ_CP018024.1_890636_891674_+,NA|110aa|down_1|NZ_CP018024.1_895578_895908_+	NA|74aa|up_9|NZ_CP018024.1_880456_880678_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|333aa|up_8|NZ_CP018024.1_880755_881754_+	COG2946, COG2946, Putative phage replication protein RstA [DNA replication, recombination, and repair]	NA|391aa|up_7|NZ_CP018024.1_881750_882923_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|399aa|up_6|NZ_CP018024.1_882952_884149_-	NA	WYL|276aa|up_5|NZ_CP018024.1_884779_885607_+	pfam13280, WYL, WYL domain	cas1|326aa|up_4|NZ_CP018024.1_885744_886722_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|977aa|up_3|NZ_CP018024.1_886718_889649_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas7f|325aa|up_2|NZ_CP018024.1_889652_890627_+	NA	cas5|346aa|up_1|NZ_CP018024.1_890636_891674_+	NA	cas6f|184aa|up_0|NZ_CP018024.1_891682_892234_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|270aa|down_0|NZ_CP018024.1_894469_895279_+	TIGR04052, hypothetical_protein_MettrDRAFT_3899, AZL_007920/MXAN_0976 family protein	NA|110aa|down_1|NZ_CP018024.1_895578_895908_+	NA	NA|109aa|down_2|NZ_CP018024.1_896268_896595_+	pfam12514, DUF3718, Protein of unknown function (DUF3718)	NA|254aa|down_3|NZ_CP018024.1_896741_897503_+	smart00850, LytTR, LytTr DNA-binding domain	NA|138aa|down_4|NZ_CP018024.1_897677_898091_+	pfam03788, LrgA, LrgA family	NA|237aa|down_5|NZ_CP018024.1_898083_898794_+	pfam04172, LrgB, LrgB-like family	NA|332aa|down_6|NZ_CP018024.1_899074_900070_+	cd17593, REC_CheC-like, phosphoacceptor receiver (REC) domain of uncharacterized response regulators containing a CheC domain	NA|164aa|down_7|NZ_CP018024.1_900069_900561_+	pfam08448, PAS_4, PAS fold	NA|592aa|down_8|NZ_CP018024.1_900651_902427_+	pfam07603, DUF1566, Protein of unknown function (DUF1566)	NA|188aa|down_9|NZ_CP018024.1_902429_902993_+	pfam07603, DUF1566, Protein of unknown function (DUF1566)
GCF_001886395.1_ASM188639v1	NZ_CP018024	Alteromonas mediterranea strain CP48 chromosome, complete genome	2	1766278-1766463	2,2	CRT,PILER-CR	no	DEDDh	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3,DEDDh,Cas9_archaeal,csa3,DinG	Unclear	TAGCGTGGGTGTCTTTGTAAG,TGCTCGTTAGCGTGGGTGTCTTTGTAAG	21,28	0	0	NA	NA	NA:NA	3,2	3	Orphan	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3,DEDDh,Cas9_archaeal,csa3,DinG,csf2gr7,cas6e,RT,c2c9_V-U4,Cas14b_CAS-V-F	NA,NA	NA|136aa|up_9|NZ_CP018024.1_1749303_1749711_-	cd04776, HTH_GnyR, Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR	NA|392aa|up_8|NZ_CP018024.1_1750056_1751232_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|380aa|up_7|NZ_CP018024.1_1751325_1752465_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|412aa|up_6|NZ_CP018024.1_1752457_1753693_+	COG3844, COG3844, Kynureninase [Amino acid transport and metabolism]	NA|468aa|up_5|NZ_CP018024.1_1753825_1755229_+	cd13708, PBP2_BvgS_like_1, Putative sensor domain similar to BvgS; the type 2 periplasmic binding protein domain	NA|552aa|up_4|NZ_CP018024.1_1755425_1757081_-	pfam03961, FapA, Flagellar Assembly Protein A	DEDDh|477aa|up_3|NZ_CP018024.1_1757207_1758638_-	PRK11779, sbcB, exonuclease I; Provisional	NA|1237aa|up_2|NZ_CP018024.1_1758871_1762582_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|348aa|up_1|NZ_CP018024.1_1762701_1763745_+	pfam01112, Asparaginase_2, Asparaginase	NA|140aa|up_0|NZ_CP018024.1_1763909_1764329_+	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|349aa|down_0|NZ_CP018024.1_1766688_1767735_-	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain	NA|902aa|down_1|NZ_CP018024.1_1767876_1770582_-	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor	NA|304aa|down_2|NZ_CP018024.1_1771023_1771935_+	pfam00990, GGDEF, Diguanylate cyclase, GGDEF domain	NA|425aa|down_3|NZ_CP018024.1_1771983_1773258_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|449aa|down_4|NZ_CP018024.1_1773532_1774879_+	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|1343aa|down_5|NZ_CP018024.1_1774979_1779008_+	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional	NA|101aa|down_6|NZ_CP018024.1_1779229_1779532_+	pfam07238, PilZ, PilZ domain	NA|84aa|down_7|NZ_CP018024.1_1779798_1780050_+	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|398aa|down_8|NZ_CP018024.1_1780149_1781343_-	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|326aa|down_9|NZ_CP018024.1_1781494_1782472_+	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase
GCF_001886395.1_ASM188639v1	NZ_CP018025	Alteromonas mediterranea strain CP48 plasmid pAMCP48-600, complete sequence	1	187640-188036	1,1	CRISPRCasFinder,PILER-CR	no	csf2gr7,DinG,cas6e	DEDDh,csf2gr7,DinG,cas6e,RT,c2c9_V-U4,Cas14b_CAS-V-F	Type IV-A	CGGTTCACCCCCACCTACGCGGGGAATAC,CGGTTCACCCCCACCTACGCGGGGAATAC	29,29	0	0	NA	NA	NA:NA	6,4	6	TypeIV-A	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3,DEDDh,Cas9_archaeal,csa3,DinG,csf2gr7,cas6e,RT,c2c9_V-U4,Cas14b_CAS-V-F	NA|144aa|up_9|NZ_CP018025.1_180294_180726_+,NA|190aa|up_8|NZ_CP018025.1_180833_181403_+,NA|353aa|up_7|NZ_CP018025.1_181440_182499_-,NA|144aa|up_6|NZ_CP018025.1_182571_183003_-,NA|350aa|up_5|NZ_CP018025.1_183346_184396_+,NA|232aa|up_4|NZ_CP018025.1_184461_185157_+,NA|86aa|up_3|NZ_CP018025.1_185168_185426_+,NA|332aa|up_0|NZ_CP018025.1_186420_187416_-,NA|242aa|down_1|NZ_CP018025.1_189218_189944_-,NA|323aa|down_4|NZ_CP018025.1_192522_193491_-,NA|251aa|down_5|NZ_CP018025.1_193756_194509_+,NA|62aa|down_6|NZ_CP018025.1_194704_194890_+,NA|80aa|down_7|NZ_CP018025.1_195185_195425_+,NA|244aa|down_8|NZ_CP018025.1_195678_196410_+,NA|116aa|down_9|NZ_CP018025.1_196491_196839_+	NA|144aa|up_9|NZ_CP018025.1_180294_180726_+	NA	NA|190aa|up_8|NZ_CP018025.1_180833_181403_+	NA	NA|353aa|up_7|NZ_CP018025.1_181440_182499_-	NA	NA|144aa|up_6|NZ_CP018025.1_182571_183003_-	NA	NA|350aa|up_5|NZ_CP018025.1_183346_184396_+	NA	NA|232aa|up_4|NZ_CP018025.1_184461_185157_+	NA	NA|86aa|up_3|NZ_CP018025.1_185168_185426_+	NA	NA|98aa|up_2|NZ_CP018025.1_185544_185838_+	pfam15065, NCU-G1, Lysosomal transcription factor, NCU-G1	NA|120aa|up_1|NZ_CP018025.1_186060_186420_+	pfam12128, DUF3584, Protein of unknown function (DUF3584)	NA|332aa|up_0|NZ_CP018025.1_186420_187416_-	NA	csf2gr7|368aa|down_0|NZ_CP018025.1_188095_189199_-	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	NA|242aa|down_1|NZ_CP018025.1_189218_189944_-	NA	DinG|665aa|down_2|NZ_CP018025.1_189940_191935_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	cas6e|198aa|down_3|NZ_CP018025.1_191927_192521_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	NA|323aa|down_4|NZ_CP018025.1_192522_193491_-	NA	NA|251aa|down_5|NZ_CP018025.1_193756_194509_+	NA	NA|62aa|down_6|NZ_CP018025.1_194704_194890_+	NA	NA|80aa|down_7|NZ_CP018025.1_195185_195425_+	NA	NA|244aa|down_8|NZ_CP018025.1_195678_196410_+	NA	NA|116aa|down_9|NZ_CP018025.1_196491_196839_+	NA
GCF_001886395.1_ASM188639v1	NZ_CP018025	Alteromonas mediterranea strain CP48 plasmid pAMCP48-600, complete sequence	2	441876-441993	2	CRISPRCasFinder	no		DEDDh,csf2gr7,DinG,cas6e,RT,c2c9_V-U4,Cas14b_CAS-V-F	Orphan	TGGTGACGGTGGTGACGGTGGTGAC	25	1	4	441949-441968|441949-441968|441949-441968|441949-441968	NZ_CP018025.1_441976-441995|NZ_CP018025.1_441985-442004|NZ_CP018025.1_441994-442013|NZ_CP018024.1_566987-567006	NA	2	2	Orphan	WYL,cas1,cas3f,cas7f,cas5,cas6f,cas3,DEDDh,Cas9_archaeal,csa3,DinG,csf2gr7,cas6e,RT,c2c9_V-U4,Cas14b_CAS-V-F	NA|82aa|up_8|NZ_CP018025.1_435988_436234_+,NA|66aa|up_7|NZ_CP018025.1_436247_436445_+,NA|167aa|up_4|NZ_CP018025.1_438316_438817_-,NA|97aa|up_3|NZ_CP018025.1_439017_439308_-,NA|108aa|up_2|NZ_CP018025.1_439584_439908_-,NA|166aa|up_0|NZ_CP018025.1_441146_441644_-,NA|177aa|down_2|NZ_CP018025.1_445755_446286_+,NA|202aa|down_3|NZ_CP018025.1_446323_446929_+,NA|218aa|down_4|NZ_CP018025.1_447012_447666_+,NA|404aa|down_5|NZ_CP018025.1_447696_448908_-,NA|135aa|down_8|NZ_CP018025.1_450915_451320_-,NA|353aa|down_9|NZ_CP018025.1_451418_452477_-	NA|111aa|up_9|NZ_CP018025.1_435636_435969_+	pfam13744, HTH_37, Helix-turn-helix domain	NA|82aa|up_8|NZ_CP018025.1_435988_436234_+	NA	NA|66aa|up_7|NZ_CP018025.1_436247_436445_+	NA	NA|118aa|up_6|NZ_CP018025.1_436802_437156_+	COG0222, RplL, Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis]	NA|128aa|up_5|NZ_CP018025.1_437787_438171_+	COG3671, COG3671, Predicted membrane protein [Function unknown]	NA|167aa|up_4|NZ_CP018025.1_438316_438817_-	NA	NA|97aa|up_3|NZ_CP018025.1_439017_439308_-	NA	NA|108aa|up_2|NZ_CP018025.1_439584_439908_-	NA	NA|333aa|up_1|NZ_CP018025.1_440093_441092_+	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase	NA|166aa|up_0|NZ_CP018025.1_441146_441644_-	NA	NA|591aa|down_0|NZ_CP018025.1_442897_444670_+	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13	NA|302aa|down_1|NZ_CP018025.1_444783_445689_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|177aa|down_2|NZ_CP018025.1_445755_446286_+	NA	NA|202aa|down_3|NZ_CP018025.1_446323_446929_+	NA	NA|218aa|down_4|NZ_CP018025.1_447012_447666_+	NA	NA|404aa|down_5|NZ_CP018025.1_447696_448908_-	NA	NA|267aa|down_6|NZ_CP018025.1_449000_449801_-	pfam05735, TSP_C, Thrombospondin C-terminal region	NA|345aa|down_7|NZ_CP018025.1_449853_450888_-	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase	NA|135aa|down_8|NZ_CP018025.1_450915_451320_-	NA	NA|353aa|down_9|NZ_CP018025.1_451418_452477_-	NA
