assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001887575.1_ASM188757v1	NZ_CP016912	Burkholderia pseudomallei strain Burk178-Type2 chromosome 2, complete sequence	1	779353-779495	1	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCTAACCGCTAACCGCTAACCGCTAACCGCT	31	1	22	779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464|779440-779464	NZ_CP016911.1_1281738-1281762|NZ_CP016911.1_1281745-1281769|NZ_CP016911.1_1281752-1281776|NZ_CP016911.1_1281759-1281783|NZ_CP016911.1_1281766-1281790|NZ_CP016911.1_1281773-1281797|NZ_CP016911.1_1281780-1281804|NZ_CP016911.1_1281787-1281811|NZ_CP016911.1_1281794-1281818|NZ_CP016911.1_1281801-1281825|NZ_CP016911.1_1281808-1281832|NZ_CP016911.1_1281815-1281839|NZ_CP016911.1_1281822-1281846|NZ_CP016911.1_1281829-1281853|NZ_CP016911.1_1281836-1281860|NZ_CP016911.1_1281843-1281867|NZ_CP016911.1_1281850-1281874|NZ_CP016911.1_1281857-1281881|NZ_CP016911.1_1281864-1281888|NZ_CP016911.1_1281878-1281902|NZ_CP016911.1_1281871-1281895|NZ_CP016911.1_1281885-1281909	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|43aa|up_9|NZ_CP016912.1_766350_766479_+,NA|64aa|up_5|NZ_CP016912.1_770822_771014_+,NA	NA|43aa|up_9|NZ_CP016912.1_766350_766479_+	NA	NA|440aa|up_8|NZ_CP016912.1_766486_767806_+	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|529aa|up_7|NZ_CP016912.1_767802_769389_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|332aa|up_6|NZ_CP016912.1_769701_770697_+	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase	NA|64aa|up_5|NZ_CP016912.1_770822_771014_+	NA	NA|528aa|up_4|NZ_CP016912.1_771010_772594_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|418aa|up_3|NZ_CP016912.1_773332_774586_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|422aa|up_2|NZ_CP016912.1_775099_776365_-	cd18622, GH32_Inu-like, glycoside hydrolase family 32 protein such as Aspergillus ficuum endo-inulinase (Inu2)	NA|522aa|up_1|NZ_CP016912.1_776497_778063_-	pfam02435, Glyco_hydro_68, Levansucrase/Invertase	NA|339aa|up_0|NZ_CP016912.1_778251_779268_+	cd20010, PBP1_AglR-like, Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) and similar proteins	NA|400aa|down_0|NZ_CP016912.1_779757_780957_+	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent	NA|342aa|down_1|NZ_CP016912.1_781134_782160_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|425aa|down_2|NZ_CP016912.1_782592_783867_+	PRK13034, PRK13034, serine hydroxymethyltransferase; Reviewed	NA|324aa|down_3|NZ_CP016912.1_783939_784911_+	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|178aa|down_4|NZ_CP016912.1_785061_785595_+	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|688aa|down_5|NZ_CP016912.1_785655_787719_+	cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3	NA|642aa|down_6|NZ_CP016912.1_787721_789647_+	pfam11982, DUF3483, Domain of unknown function (DUF3483)	NA|391aa|down_7|NZ_CP016912.1_789651_790824_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|262aa|down_8|NZ_CP016912.1_790820_791606_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|423aa|down_9|NZ_CP016912.1_791630_792899_+	cd08884, RHO_alpha_C_GbcA-like, C-terminal catalytic domain of GbcA (glycine betaine catabolism A) from Pseudomonas aeruginosa PAO1 and related aromatic ring hydroxylating dioxygenases
GCF_001887575.1_ASM188757v1	NZ_CP016912	Burkholderia pseudomallei strain Burk178-Type2 chromosome 2, complete sequence	2	1440481-1440645	1	PILER-CR	no		cas3,DinG,csa3	Orphan	GCGAGCGCGGCGAGCGCGGCCGCG	24	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|77aa|up_4|NZ_CP016912.1_1434459_1434690_+,NA|143aa|down_2|NZ_CP016912.1_1444240_1444669_-,NA|84aa|down_4|NZ_CP016912.1_1445857_1446109_-,NA|83aa|down_7|NZ_CP016912.1_1449631_1449880_-,NA|67aa|down_8|NZ_CP016912.1_1450326_1450527_-	NA|53aa|up_9|NZ_CP016912.1_1431285_1431444_+	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|174aa|up_8|NZ_CP016912.1_1431459_1431981_+	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional	NA|275aa|up_7|NZ_CP016912.1_1431977_1432802_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|329aa|up_6|NZ_CP016912.1_1432859_1433846_+	pfam04264, YceI, YceI-like domain	NA|120aa|up_5|NZ_CP016912.1_1433885_1434245_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|77aa|up_4|NZ_CP016912.1_1434459_1434690_+	NA	NA|170aa|up_3|NZ_CP016912.1_1434711_1435221_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|335aa|up_2|NZ_CP016912.1_1435217_1436222_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|822aa|up_1|NZ_CP016912.1_1436540_1439006_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|327aa|up_0|NZ_CP016912.1_1439224_1440205_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|609aa|down_0|NZ_CP016912.1_1441279_1443106_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|350aa|down_1|NZ_CP016912.1_1443102_1444152_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|143aa|down_2|NZ_CP016912.1_1444240_1444669_-	NA	NA|247aa|down_3|NZ_CP016912.1_1444783_1445524_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|84aa|down_4|NZ_CP016912.1_1445857_1446109_-	NA	NA|420aa|down_5|NZ_CP016912.1_1446271_1447531_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|488aa|down_6|NZ_CP016912.1_1447750_1449214_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|83aa|down_7|NZ_CP016912.1_1449631_1449880_-	NA	NA|67aa|down_8|NZ_CP016912.1_1450326_1450527_-	NA	NA|91aa|down_9|NZ_CP016912.1_1450519_1450792_+	pfam13663, DUF4148, Domain of unknown function (DUF4148)
GCF_001887575.1_ASM188757v1	NZ_CP016912	Burkholderia pseudomallei strain Burk178-Type2 chromosome 2, complete sequence	3	2726984-2727076	2	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCGCGTCGGCGCGCGCGGCGGCGA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|53aa|up_6|NZ_CP016912.1_2718943_2719102_+,NA|170aa|up_4|NZ_CP016912.1_2721299_2721809_+,NA|168aa|up_3|NZ_CP016912.1_2721866_2722370_-,NA|86aa|down_5|NZ_CP016912.1_2731200_2731458_+,NA|57aa|down_9|NZ_CP016912.1_2736081_2736252_-	NA|1083aa|up_9|NZ_CP016912.1_2712476_2715725_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|375aa|up_8|NZ_CP016912.1_2715727_2716852_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|612aa|up_7|NZ_CP016912.1_2717001_2718837_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|53aa|up_6|NZ_CP016912.1_2718943_2719102_+	NA	NA|522aa|up_5|NZ_CP016912.1_2719193_2720759_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|170aa|up_4|NZ_CP016912.1_2721299_2721809_+	NA	NA|168aa|up_3|NZ_CP016912.1_2721866_2722370_-	NA	NA|342aa|up_2|NZ_CP016912.1_2722446_2723472_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|283aa|up_1|NZ_CP016912.1_2723690_2724539_-	pfam00231, ATP-synt, ATP synthase	NA|671aa|up_0|NZ_CP016912.1_2724535_2726548_-	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|83aa|down_0|NZ_CP016912.1_2727294_2727543_-	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|234aa|down_1|NZ_CP016912.1_2727539_2728241_-	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|103aa|down_2|NZ_CP016912.1_2728237_2728546_-	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|167aa|down_3|NZ_CP016912.1_2728538_2729039_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|152aa|down_4|NZ_CP016912.1_2729035_2729491_-	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|86aa|down_5|NZ_CP016912.1_2731200_2731458_+	NA	NA|598aa|down_6|NZ_CP016912.1_2731589_2733383_+	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|477aa|down_7|NZ_CP016912.1_2733366_2734797_+	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|393aa|down_8|NZ_CP016912.1_2734793_2735972_+	PRK07058, PRK07058, acetate/propionate family kinase	NA|57aa|down_9|NZ_CP016912.1_2736081_2736252_-	NA
GCF_001887575.1_ASM188757v1	NZ_CP016912	Burkholderia pseudomallei strain Burk178-Type2 chromosome 2, complete sequence	4	3134155-3134300	2,3	PILER-CR,CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCGAAG,CGGAATGCCCGATCATCGGGATGC	53,24	0	0	NA	NA	NA:NA	2,1	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|75aa|up_9|NZ_CP016912.1_3123447_3123672_-,NA|97aa|up_8|NZ_CP016912.1_3123650_3123941_+,NA|37aa|up_5|NZ_CP016912.1_3126651_3126762_-,NA|144aa|up_3|NZ_CP016912.1_3127999_3128431_+,NA	NA|75aa|up_9|NZ_CP016912.1_3123447_3123672_-	NA	NA|97aa|up_8|NZ_CP016912.1_3123650_3123941_+	NA	NA|147aa|up_7|NZ_CP016912.1_3124700_3125141_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_6|NZ_CP016912.1_3125475_3126591_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|37aa|up_5|NZ_CP016912.1_3126651_3126762_-	NA	NA|312aa|up_4|NZ_CP016912.1_3126888_3127824_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|144aa|up_3|NZ_CP016912.1_3127999_3128431_+	NA	NA|553aa|up_2|NZ_CP016912.1_3128730_3130389_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP016912.1_3130672_3132946_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP016912.1_3133078_3133474_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP016912.1_3134876_3136142_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|595aa|down_1|NZ_CP016912.1_3136457_3138242_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP016912.1_3138316_3140128_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|152aa|down_3|NZ_CP016912.1_3140144_3140600_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|344aa|down_4|NZ_CP016912.1_3140697_3141729_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_5|NZ_CP016912.1_3141725_3143558_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|150aa|down_6|NZ_CP016912.1_3144014_3144464_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP016912.1_3144904_3145558_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP016912.1_3145625_3146060_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|376aa|down_9|NZ_CP016912.1_3146476_3147604_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_001887575.1_ASM188757v1	NZ_CP016911	Burkholderia pseudomallei strain Burk178-Type2 chromosome 1, complete sequence	1	4021852-4021931	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,DinG,RT	Orphan	ACGGAATGGGCCCCGGCATGATG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,RT	NA|95aa|up_5|NZ_CP016911.1_4014665_4014950_+,NA|183aa|down_0|NZ_CP016911.1_4022909_4023458_+,NA|84aa|down_1|NZ_CP016911.1_4023473_4023725_+,NA|115aa|down_8|NZ_CP016911.1_4030719_4031064_-	NA|881aa|up_9|NZ_CP016911.1_4007226_4009869_-	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|377aa|up_8|NZ_CP016911.1_4009865_4010996_-	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|374aa|up_7|NZ_CP016911.1_4012366_4013487_+	pfam13683, rve_3, Integrase core domain	NA|161aa|up_6|NZ_CP016911.1_4014186_4014669_+	pfam10908, DUF2778, Protein of unknown function (DUF2778)	NA|95aa|up_5|NZ_CP016911.1_4014665_4014950_+	NA	NA|354aa|up_4|NZ_CP016911.1_4015023_4016085_-	PHA02536, Q, portal vertex protein; Provisional	NA|292aa|up_3|NZ_CP016911.1_4017383_4018259_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|371aa|up_2|NZ_CP016911.1_4018269_4019382_-	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII	NA|365aa|up_1|NZ_CP016911.1_4019410_4020505_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|323aa|up_0|NZ_CP016911.1_4020647_4021616_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|183aa|down_0|NZ_CP016911.1_4022909_4023458_+	NA	NA|84aa|down_1|NZ_CP016911.1_4023473_4023725_+	NA	NA|483aa|down_2|NZ_CP016911.1_4023721_4025170_+	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain	NA|534aa|down_3|NZ_CP016911.1_4025188_4026790_-	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|314aa|down_4|NZ_CP016911.1_4026960_4027902_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|365aa|down_5|NZ_CP016911.1_4027898_4028993_-	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA|139aa|down_6|NZ_CP016911.1_4029394_4029811_+	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins	NA|185aa|down_7|NZ_CP016911.1_4029951_4030506_-	pfam07152, YaeQ, YaeQ protein	NA|115aa|down_8|NZ_CP016911.1_4030719_4031064_-	NA	NA|187aa|down_9|NZ_CP016911.1_4031552_4032113_-	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional
