assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001888965.1_ASM188896v1	NZ_CP018217	Lactobacillus delbrueckii subsp. sunkii strain JCM 17838, complete genome	1	301580-301674	1	CRISPRCasFinder	no	Cas14u_CAS-V	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	Unclear	AGGCCAGCTCTAAGTCGGCGGCT	23	0	0	NA	NA	NA	1	1	Unclear	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	NA,NA	NA|322aa|up_9|NZ_CP018217.1_291700_292666_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|465aa|up_8|NZ_CP018217.1_292816_294211_-	PRK11387, PRK11387, S-methylmethionine permease	NA|311aa|up_7|NZ_CP018217.1_294288_295221_+	PRK09485, mmuM, homocysteine methyltransferase; Provisional	NA|154aa|up_6|NZ_CP018217.1_295276_295738_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|151aa|up_5|NZ_CP018217.1_296102_296555_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|336aa|up_4|NZ_CP018217.1_296544_297552_+	cd08963, L-asparaginase_I, Type I (cytosolic) bacterial L-asparaginase	NA|277aa|up_3|NZ_CP018217.1_297668_298499_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|159aa|up_2|NZ_CP018217.1_298584_299061_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|478aa|up_1|NZ_CP018217.1_299140_300574_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|185aa|up_0|NZ_CP018217.1_300642_301197_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|89aa|down_0|NZ_CP018217.1_302299_302566_-	pfam06961, DUF1294, Protein of unknown function (DUF1294)	Cas14u_CAS-V|427aa|down_1|NZ_CP018217.1_302710_303991_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|257aa|down_2|NZ_CP018217.1_304273_305044_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|62aa|down_3|NZ_CP018217.1_305207_305393_+	pfam04604, L_biotic_typeA, Type-A lantibiotic	NA|426aa|down_4|NZ_CP018217.1_305393_306671_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|267aa|down_5|NZ_CP018217.1_306663_307464_+	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA	NA|725aa|down_6|NZ_CP018217.1_307470_309645_+	TIGR01193, transport/processing_ATP-binding_protein, ABC-type bacteriocin transporter	NA|70aa|down_7|NZ_CP018217.1_309733_309943_+	pfam01721, Bacteriocin_II, Class II bacteriocin	NA|106aa|down_8|NZ_CP018217.1_310173_310491_+	TIGR01295, Pediocin_PA-1_biosynthesis_protein_PedC, bacteriocin transport accessory protein, putative	NA|96aa|down_9|NZ_CP018217.1_310575_310863_+	pfam08951, EntA_Immun, Enterocin A Immunity
GCF_001888965.1_ASM188896v1	NZ_CP018217	Lactobacillus delbrueckii subsp. sunkii strain JCM 17838, complete genome	2	801539-804067	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,cas9,cas2,csn2	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	Type II-B,Type II-A,Type II-C,Type I-E	GTATTCCCCACGCAAGTGGGGGTGATCC,GTATTCCCCACGCAAGTGGGGGTGATCC,GTATTCCCCACGCAAGTGGGGGTGATCC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	41,41,41	41	TypeII-B,TypeII-A,TypeII-C,TypeI-E	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	NA|68aa|up_9|NZ_CP018217.1_790411_790615_+,NA|84aa|down_0|NZ_CP018217.1_804094_804346_+	NA|68aa|up_9|NZ_CP018217.1_790411_790615_+	NA	NA|75aa|up_8|NZ_CP018217.1_790938_791163_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas3|922aa|up_7|NZ_CP018217.1_792155_794921_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|575aa|up_6|NZ_CP018217.1_794923_796648_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|206aa|up_5|NZ_CP018217.1_796657_797275_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|359aa|up_4|NZ_CP018217.1_797292_798369_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|234aa|up_3|NZ_CP018217.1_798349_799051_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|208aa|up_2|NZ_CP018217.1_799063_799687_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|317aa|up_1|NZ_CP018217.1_799689_800640_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|291aa|up_0|NZ_CP018217.1_800636_801509_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|84aa|down_0|NZ_CP018217.1_804094_804346_+	NA	NA|187aa|down_1|NZ_CP018217.1_804380_804941_+	cd16402, ParB_N_like_MT, ParB N-terminal-like domain, some attached to C-terminal S-adenosylmethionine-dependent methyltransferase domain	NA|203aa|down_2|NZ_CP018217.1_804950_805559_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|223aa|down_3|NZ_CP018217.1_805561_806230_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|420aa|down_4|NZ_CP018217.1_806232_807492_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	cas9|1428aa|down_5|NZ_CP018217.1_807644_811928_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|down_6|NZ_CP018217.1_812132_813038_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|down_7|NZ_CP018217.1_813015_813321_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|202aa|down_8|NZ_CP018217.1_813317_813923_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|367aa|down_9|NZ_CP018217.1_814711_815812_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine
GCF_001888965.1_ASM188896v1	NZ_CP018217	Lactobacillus delbrueckii subsp. sunkii strain JCM 17838, complete genome	3	813960-814523	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,cas9,cas2,csn2	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	Type II-B,Type II-A,Type II-C,Type I-E	GTTTTAGACCTAATGTATCTGGTTAAGATTTAAAGC,GTTTTAGACCTAATGTATCTGGTTAAGATTTAAAGC,GTTTTAGACCTAATGTATCTGGTTAAGATTTAAAGC	36,36,36	0	0	NA	NA	NA:NA:NA	7,8,8	8	TypeII-B,TypeII-A,TypeII-C,TypeI-E	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	NA|84aa|up_8|NZ_CP018217.1_804094_804346_+,NA	DEDDh|291aa|up_9|NZ_CP018217.1_800636_801509_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|84aa|up_8|NZ_CP018217.1_804094_804346_+	NA	NA|187aa|up_7|NZ_CP018217.1_804380_804941_+	cd16402, ParB_N_like_MT, ParB N-terminal-like domain, some attached to C-terminal S-adenosylmethionine-dependent methyltransferase domain	NA|203aa|up_6|NZ_CP018217.1_804950_805559_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|223aa|up_5|NZ_CP018217.1_805561_806230_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|420aa|up_4|NZ_CP018217.1_806232_807492_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	cas9|1428aa|up_3|NZ_CP018217.1_807644_811928_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|NZ_CP018217.1_812132_813038_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|up_1|NZ_CP018217.1_813015_813321_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|202aa|up_0|NZ_CP018217.1_813317_813923_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|367aa|down_0|NZ_CP018217.1_814711_815812_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|409aa|down_1|NZ_CP018217.1_815813_817040_+	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|388aa|down_2|NZ_CP018217.1_817043_818207_+	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|453aa|down_3|NZ_CP018217.1_818371_819730_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|169aa|down_4|NZ_CP018217.1_819788_820295_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|315aa|down_5|NZ_CP018217.1_820357_821302_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|754aa|down_6|NZ_CP018217.1_821442_823704_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|146aa|down_7|NZ_CP018217.1_823732_824170_+	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|429aa|down_8|NZ_CP018217.1_824449_825736_+	TIGR00442, hisS, histidyl-tRNA synthetase	NA|615aa|down_9|NZ_CP018217.1_825751_827596_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated
GCF_001888965.1_ASM188896v1	NZ_CP018217	Lactobacillus delbrueckii subsp. sunkii strain JCM 17838, complete genome	4	1198914-1199017	4	CRISPRCasFinder	no	csa3,DEDDh	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	Type I-A	CCGCTGCCCCCGCACTTGTCACAGGT	26	0	0	NA	NA	NA	1	1	Orphan	cas14j,c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas9,cas2,csn2,DinG,csa3,WYL,cas14k	NA,NA	NA|285aa|up_9|NZ_CP018217.1_1184685_1185540_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|753aa|up_8|NZ_CP018217.1_1185717_1187976_+	cd02076, P-type_ATPase_H, plant and fungal plasma membrane H(+)-ATPases, and related bacterial and archaeal putative H(+)-ATPases	NA|378aa|up_7|NZ_CP018217.1_1189085_1190219_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|342aa|up_6|NZ_CP018217.1_1190336_1191362_-	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|296aa|up_5|NZ_CP018217.1_1191564_1192452_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	csa3|101aa|up_4|NZ_CP018217.1_1192562_1192865_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|176aa|up_3|NZ_CP018217.1_1192943_1193471_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|759aa|up_2|NZ_CP018217.1_1193460_1195737_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|234aa|up_1|NZ_CP018217.1_1195733_1196435_-	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|613aa|up_0|NZ_CP018217.1_1196415_1198254_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|615aa|down_0|NZ_CP018217.1_1199597_1201442_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|206aa|down_1|NZ_CP018217.1_1201501_1202119_-	PRK14162, PRK14162, heat shock protein GrpE; Provisional	NA|350aa|down_2|NZ_CP018217.1_1202130_1203180_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|314aa|down_3|NZ_CP018217.1_1203316_1204258_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|299aa|down_4|NZ_CP018217.1_1204272_1205169_-	PRK02484, truB, tRNA pseudouridine synthase B; Provisional	NA|121aa|down_5|NZ_CP018217.1_1205219_1205582_-	PRK13818, PRK13818, ribosome-binding factor A; Provisional	NA|826aa|down_6|NZ_CP018217.1_1205594_1208072_-	PRK05306, infB, translation initiation factor IF-2; Validated	NA|104aa|down_7|NZ_CP018217.1_1208076_1208388_-	PRK07283, PRK07283, YlxQ-related RNA-binding protein	NA|93aa|down_8|NZ_CP018217.1_1208387_1208666_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|404aa|down_9|NZ_CP018217.1_1208696_1209908_-	PRK12327, nusA, transcription elongation factor NusA; Provisional
