assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001889345.1_ASM188934v1	NZ_CP013247	Clostridium botulinum strain CDC_69094 chromosome, complete genome	1	1012440-1012668	1,1,1	CRT,CRISPRCasFinder,PILER-CR	no		DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	Orphan	TATTTAAATACATCCTATGTTAAGGTTCAAC,ATTTAAATACATCCTATGTTAAGGTTCAAC,ACATATTTAAATACATCCTATGTTAAGGTTCAACC	31,30,35	0	0	NA	NA	III-B:III-B:III-B	3,3,2	3	Orphan	DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	NA,NA|60aa|down_0|NZ_CP013247.1_1013003_1013183_-,NA|81aa|down_1|NZ_CP013247.1_1013173_1013416_-	NA|380aa|up_9|NZ_CP013247.1_999418_1000558_-	cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose	NA|664aa|up_8|NZ_CP013247.1_1001121_1003113_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NZ_CP013247.1_1003102_1003870_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NZ_CP013247.1_1004657_1005011_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|698aa|up_5|NZ_CP013247.1_1005336_1007430_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|455aa|up_4|NZ_CP013247.1_1007641_1009006_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|95aa|up_3|NZ_CP013247.1_1009018_1009303_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_2|NZ_CP013247.1_1009331_1009769_-	PRK10372, PRK10372, PTS ascorbate transporter subunit IIA	NA|239aa|up_1|NZ_CP013247.1_1009792_1010509_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_0|NZ_CP013247.1_1011412_1012147_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|60aa|down_0|NZ_CP013247.1_1013003_1013183_-	NA	NA|81aa|down_1|NZ_CP013247.1_1013173_1013416_-	NA	NA|58aa|down_2|NZ_CP013247.1_1013530_1013704_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|469aa|down_3|NZ_CP013247.1_1013777_1015184_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_4|NZ_CP013247.1_1015286_1016027_-	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|174aa|down_5|NZ_CP013247.1_1016371_1016893_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_6|NZ_CP013247.1_1017004_1019002_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_7|NZ_CP013247.1_1019109_1019907_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|290aa|down_8|NZ_CP013247.1_1020625_1021495_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|283aa|down_9|NZ_CP013247.1_1021813_1022662_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]
GCF_001889345.1_ASM188934v1	NZ_CP013247	Clostridium botulinum strain CDC_69094 chromosome, complete genome	2	1012920-1013015	2	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	Orphan	ATTTAAATACATCCTATGTTAAGGTTCAAC	30	0	0	NA	NA	III-B	1	1	Orphan	DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	NA,NA|81aa|down_0|NZ_CP013247.1_1013173_1013416_-,NA|78aa|down_9|NZ_CP013247.1_1023030_1023264_-	NA|380aa|up_9|NZ_CP013247.1_999418_1000558_-	cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose	NA|664aa|up_8|NZ_CP013247.1_1001121_1003113_-	pfam02687, FtsX, FtsX-like permease family	NA|256aa|up_7|NZ_CP013247.1_1003102_1003870_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|118aa|up_6|NZ_CP013247.1_1004657_1005011_-	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|698aa|up_5|NZ_CP013247.1_1005336_1007430_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|455aa|up_4|NZ_CP013247.1_1007641_1009006_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|95aa|up_3|NZ_CP013247.1_1009018_1009303_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|146aa|up_2|NZ_CP013247.1_1009331_1009769_-	PRK10372, PRK10372, PTS ascorbate transporter subunit IIA	NA|239aa|up_1|NZ_CP013247.1_1009792_1010509_-	PRK12376, PRK12376, putative translaldolase; Provisional	NA|245aa|up_0|NZ_CP013247.1_1011412_1012147_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|81aa|down_0|NZ_CP013247.1_1013173_1013416_-	NA	NA|58aa|down_1|NZ_CP013247.1_1013530_1013704_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|469aa|down_2|NZ_CP013247.1_1013777_1015184_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|down_3|NZ_CP013247.1_1015286_1016027_-	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|174aa|down_4|NZ_CP013247.1_1016371_1016893_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_5|NZ_CP013247.1_1017004_1019002_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_6|NZ_CP013247.1_1019109_1019907_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|290aa|down_7|NZ_CP013247.1_1020625_1021495_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|283aa|down_8|NZ_CP013247.1_1021813_1022662_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|78aa|down_9|NZ_CP013247.1_1023030_1023264_-	NA
GCF_001889345.1_ASM188934v1	NZ_CP013247	Clostridium botulinum strain CDC_69094 chromosome, complete genome	3	1842972-1843042	3	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	Orphan	TATTATTTTCAATAAAAAATAAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	NA|65aa|up_9|NZ_CP013247.1_1834844_1835039_-,NA|263aa|up_7|NZ_CP013247.1_1835464_1836253_-,NA|256aa|up_5|NZ_CP013247.1_1837175_1837943_-,NA|306aa|up_3|NZ_CP013247.1_1838776_1839694_-,NA|362aa|up_2|NZ_CP013247.1_1839726_1840812_-,NA|333aa|up_1|NZ_CP013247.1_1840823_1841822_-,NA|92aa|up_0|NZ_CP013247.1_1841833_1842109_-,NA|503aa|down_0|NZ_CP013247.1_1844144_1845653_-,NA|332aa|down_1|NZ_CP013247.1_1845666_1846662_-,NA|114aa|down_3|NZ_CP013247.1_1848018_1848360_-,NA|362aa|down_4|NZ_CP013247.1_1848372_1849458_-,NA|145aa|down_5|NZ_CP013247.1_1849444_1849879_-,NA|81aa|down_7|NZ_CP013247.1_1851596_1851839_-,NA|139aa|down_8|NZ_CP013247.1_1851798_1852215_-	NA|65aa|up_9|NZ_CP013247.1_1834844_1835039_-	NA	NA|85aa|up_8|NZ_CP013247.1_1835057_1835312_-	pfam10779, XhlA, Haemolysin XhlA	NA|263aa|up_7|NZ_CP013247.1_1835464_1836253_-	NA	NA|275aa|up_6|NZ_CP013247.1_1836285_1837110_-	pfam07738, Sad1_UNC, Sad1 / UNC-like C-terminal	NA|256aa|up_5|NZ_CP013247.1_1837175_1837943_-	NA	NA|260aa|up_4|NZ_CP013247.1_1837994_1838774_-	pfam00754, F5_F8_type_C, F5/8 type C domain	NA|306aa|up_3|NZ_CP013247.1_1838776_1839694_-	NA	NA|362aa|up_2|NZ_CP013247.1_1839726_1840812_-	NA	NA|333aa|up_1|NZ_CP013247.1_1840823_1841822_-	NA	NA|92aa|up_0|NZ_CP013247.1_1841833_1842109_-	NA	NA|503aa|down_0|NZ_CP013247.1_1844144_1845653_-	NA	NA|332aa|down_1|NZ_CP013247.1_1845666_1846662_-	NA	NA|447aa|down_2|NZ_CP013247.1_1846663_1848004_-	pfam00656, Peptidase_C14, Caspase domain	NA|114aa|down_3|NZ_CP013247.1_1848018_1848360_-	NA	NA|362aa|down_4|NZ_CP013247.1_1848372_1849458_-	NA	NA|145aa|down_5|NZ_CP013247.1_1849444_1849879_-	NA	NA|514aa|down_6|NZ_CP013247.1_1849891_1851433_-	COG5412, COG5412, Phage-related protein [Function unknown]	NA|81aa|down_7|NZ_CP013247.1_1851596_1851839_-	NA	NA|139aa|down_8|NZ_CP013247.1_1851798_1852215_-	NA	NA|296aa|down_9|NZ_CP013247.1_1852229_1853117_-	pfam13205, Big_5, Bacterial Ig-like domain
GCF_001889345.1_ASM188934v1	NZ_CP013247	Clostridium botulinum strain CDC_69094 chromosome, complete genome	4	3473992-3474087	4	CRISPRCasFinder	no	csa3	DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	Type I-A	ATATACTTAAAAAGTAAATTAAT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,DinG,c2c9_V-U4	NA|86aa|up_7|NZ_CP013247.1_3463104_3463362_+,NA|144aa|up_6|NZ_CP013247.1_3464054_3464486_+,NA|143aa|up_1|NZ_CP013247.1_3471742_3472171_-,NA	NA|49aa|up_9|NZ_CP013247.1_3462040_3462187_+	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|193aa|up_8|NZ_CP013247.1_3462516_3463095_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|86aa|up_7|NZ_CP013247.1_3463104_3463362_+	NA	NA|144aa|up_6|NZ_CP013247.1_3464054_3464486_+	NA	NA|312aa|up_5|NZ_CP013247.1_3464903_3465839_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|379aa|up_4|NZ_CP013247.1_3465831_3466968_+	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|491aa|up_3|NZ_CP013247.1_3467965_3469438_-	pfam06597, Clostridium_P47, Clostridium P-47 protein	NA|751aa|up_2|NZ_CP013247.1_3469476_3471729_-	pfam06597, Clostridium_P47, Clostridium P-47 protein	NA|143aa|up_1|NZ_CP013247.1_3471742_3472171_-	NA	NA|179aa|up_0|NZ_CP013247.1_3473413_3473950_-	TIGR03209, P-21_partial, clostridium toxin-associated regulator BotR	NA|417aa|down_0|NZ_CP013247.1_3474155_3475406_+	pfam06597, Clostridium_P47, Clostridium P-47 protein	NA|1160aa|down_1|NZ_CP013247.1_3475421_3478901_+	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease	NA|1297aa|down_2|NZ_CP013247.1_3478944_3482835_+	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease	NA|317aa|down_3|NZ_CP013247.1_3483636_3484587_+	cd06414, GH25_LytC-like, The LytC lysozyme of Streptococcus pneumoniae is a bacterial cell wall hydrolase that cleaves the beta1-4-glycosydic bond located between the N-acetylmuramoyl-N-glucosaminyl residues of the cell wall polysaccharide chains	NA|154aa|down_4|NZ_CP013247.1_3485573_3486035_+	pfam15891, Nuc_deoxyri_tr2, Nucleoside 2-deoxyribosyltransferase like	NA|325aa|down_5|NZ_CP013247.1_3486024_3486999_+	cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides	NA|253aa|down_6|NZ_CP013247.1_3487010_3487769_+	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|405aa|down_7|NZ_CP013247.1_3487814_3489029_+	TIGR04541, Thiaminase_I_Thiamine_pyridinylase	NA|276aa|down_8|NZ_CP013247.1_3489106_3489934_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|78aa|down_9|NZ_CP013247.1_3490111_3490345_+	TIGR04540, CLB_0814_fam, conserved hypothetical protein
