assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001889545.1_ASM188954v1	NZ_CP018194	Granulibacter bethesdensis strain NIH8.1 chromosome, complete genome	1	1559937-1560208	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	c2c9_V-U4	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Type V-U4	GGACTATCCCCGCGCACGCGGGGGAACC,GGACTATCCCCGCGCACGCGGGGGAACC,GGACTATCCCCGCGCACGCGGGGGAACC	28,28,28	0	0	NA	NA	NA:NA:NA	4,4,3	4	TypeV-U4	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA|157aa|down_1|NZ_CP018194.1_1560746_1561217_+,NA|398aa|down_2|NZ_CP018194.1_1561307_1562501_+	NA|67aa|up_9|NZ_CP018194.1_1551146_1551347_-	pfam06698, DUF1192, Protein of unknown function (DUF1192)	NA|195aa|up_8|NZ_CP018194.1_1551544_1552129_+	pfam06242, DUF1013, Protein of unknown function (DUF1013)	NA|61aa|up_7|NZ_CP018194.1_1552216_1552399_-	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|68aa|up_6|NZ_CP018194.1_1552613_1552817_+	COG5481, COG5481, Uncharacterized conserved small protein containing a coiled-coil domain [Function unknown]	NA|174aa|up_5|NZ_CP018194.1_1552821_1553343_+	pfam00731, AIRC, AIR carboxylase	NA|380aa|up_4|NZ_CP018194.1_1553352_1554492_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|405aa|up_3|NZ_CP018194.1_1554687_1555902_+	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|275aa|up_2|NZ_CP018194.1_1555940_1556765_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|65aa|up_1|NZ_CP018194.1_1556810_1557005_-	pfam01679, Pmp3, Proteolipid membrane potential modulator	NA|881aa|up_0|NZ_CP018194.1_1557100_1559743_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|172aa|down_0|NZ_CP018194.1_1560238_1560754_+	cd02972, DsbA_family, DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins	NA|157aa|down_1|NZ_CP018194.1_1560746_1561217_+	NA	NA|398aa|down_2|NZ_CP018194.1_1561307_1562501_+	NA	NA|85aa|down_3|NZ_CP018194.1_1562631_1562886_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|142aa|down_4|NZ_CP018194.1_1562885_1563311_+	cd18746, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	c2c9_V-U4|407aa|down_5|NZ_CP018194.1_1563995_1565216_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|138aa|down_6|NZ_CP018194.1_1565238_1565652_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|120aa|down_7|NZ_CP018194.1_1566183_1566543_-	PRK06848, PRK06848, cytidine deaminase	NA|346aa|down_8|NZ_CP018194.1_1566646_1567684_-	PRK09354, recA, recombinase A; Provisional	NA|163aa|down_9|NZ_CP018194.1_1568038_1568527_+	TIGR03330, SAM_DCase_Bsu, S-adenosylmethionine decarboxylase proenzyme, Bacillus form
GCF_001889545.1_ASM188954v1	NZ_CP018194	Granulibacter bethesdensis strain NIH8.1 chromosome, complete genome	2	1565715-1566108	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Type V-U4	GGACTATCCCCGCGCACGCGGGGGAACC,GGACTATCCCCGCGCACGCGGGGGAACC,GGACTATCCCCGCGCACGCGGGGGAACC	28,28,28	0	0	NA	NA	NA:NA:NA	6,6,6	6	TypeV-U4	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|157aa|up_5|NZ_CP018194.1_1560746_1561217_+,NA|398aa|up_4|NZ_CP018194.1_1561307_1562501_+,NA|60aa|down_5|NZ_CP018194.1_1570161_1570341_-,NA|59aa|down_7|NZ_CP018194.1_1571583_1571760_-,NA|311aa|down_8|NZ_CP018194.1_1571809_1572742_+	NA|275aa|up_9|NZ_CP018194.1_1555940_1556765_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|65aa|up_8|NZ_CP018194.1_1556810_1557005_-	pfam01679, Pmp3, Proteolipid membrane potential modulator	NA|881aa|up_7|NZ_CP018194.1_1557100_1559743_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|172aa|up_6|NZ_CP018194.1_1560238_1560754_+	cd02972, DsbA_family, DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins	NA|157aa|up_5|NZ_CP018194.1_1560746_1561217_+	NA	NA|398aa|up_4|NZ_CP018194.1_1561307_1562501_+	NA	NA|85aa|up_3|NZ_CP018194.1_1562631_1562886_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|142aa|up_2|NZ_CP018194.1_1562885_1563311_+	cd18746, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	c2c9_V-U4|407aa|up_1|NZ_CP018194.1_1563995_1565216_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|138aa|up_0|NZ_CP018194.1_1565238_1565652_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|120aa|down_0|NZ_CP018194.1_1566183_1566543_-	PRK06848, PRK06848, cytidine deaminase	NA|346aa|down_1|NZ_CP018194.1_1566646_1567684_-	PRK09354, recA, recombinase A; Provisional	NA|163aa|down_2|NZ_CP018194.1_1568038_1568527_+	TIGR03330, SAM_DCase_Bsu, S-adenosylmethionine decarboxylase proenzyme, Bacillus form	NA|294aa|down_3|NZ_CP018194.1_1568649_1569531_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|138aa|down_4|NZ_CP018194.1_1569662_1570076_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|60aa|down_5|NZ_CP018194.1_1570161_1570341_-	NA	NA|357aa|down_6|NZ_CP018194.1_1570422_1571493_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|59aa|down_7|NZ_CP018194.1_1571583_1571760_-	NA	NA|311aa|down_8|NZ_CP018194.1_1571809_1572742_+	NA	NA|177aa|down_9|NZ_CP018194.1_1573428_1573959_+	PRK02853, PRK02853, hypothetical protein; Provisional
GCF_001889545.1_ASM188954v1	NZ_CP018194	Granulibacter bethesdensis strain NIH8.1 chromosome, complete genome	3	1833673-1834737	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GGTCTATCTCCGCGCACGCGGAGGAACC,GGTCTATCTCCGCGCACGCGGAGGAACC,GGTCTATCTCCGCGCACGCGGAGGAACC	28,28,28	0	0	NA	NA	NA:NA:NA	17,17,16	17	Orphan	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA|77aa|up_8|NZ_CP018194.1_1824222_1824453_+,NA|61aa|down_0|NZ_CP018194.1_1835049_1835232_-	NA|616aa|up_9|NZ_CP018194.1_1822355_1824203_+	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|77aa|up_8|NZ_CP018194.1_1824222_1824453_+	NA	NA|337aa|up_7|NZ_CP018194.1_1824676_1825687_+	cd12834, ZntB_u1, Uncharacterized bacterial subgroup of the Salmonella typhimurium Zn2+ transporter ZntB-like subfamily	NA|306aa|up_6|NZ_CP018194.1_1825801_1826719_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|254aa|up_5|NZ_CP018194.1_1826765_1827527_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|329aa|up_4|NZ_CP018194.1_1827708_1828695_-	pfam14613, DUF4449, Protein of unknown function (DUF4449)	NA|213aa|up_3|NZ_CP018194.1_1828953_1829592_-	COG2353, COG2353, Uncharacterized conserved protein [Function unknown]	NA|342aa|up_2|NZ_CP018194.1_1829872_1830898_+	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]	NA|249aa|up_1|NZ_CP018194.1_1831022_1831769_+	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|571aa|up_0|NZ_CP018194.1_1831765_1833478_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|61aa|down_0|NZ_CP018194.1_1835049_1835232_-	NA	NA|219aa|down_1|NZ_CP018194.1_1836496_1837153_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|180aa|down_2|NZ_CP018194.1_1837156_1837696_-	pfam06938, DUF1285, Protein of unknown function (DUF1285)	NA|464aa|down_3|NZ_CP018194.1_1837939_1839331_-	TIGR03173, pbuX, xanthine permease	NA|305aa|down_4|NZ_CP018194.1_1839494_1840409_+	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|335aa|down_5|NZ_CP018194.1_1840545_1841550_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|310aa|down_6|NZ_CP018194.1_1841546_1842476_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|958aa|down_7|NZ_CP018194.1_1842489_1845363_+	pfam13709, DUF4159, Domain of unknown function (DUF4159)	NA|756aa|down_8|NZ_CP018194.1_1845374_1847642_+	pfam07090, GATase1_like, Putative glutamine amidotransferase	NA|170aa|down_9|NZ_CP018194.1_1847744_1848254_+	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family
GCF_001889545.1_ASM188954v1	NZ_CP018194	Granulibacter bethesdensis strain NIH8.1 chromosome, complete genome	4	1878584-1878663	4	CRISPRCasFinder	no		csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TGTCAACATACTGGTTACCACCA	23	1	8	1878607-1878640|1878607-1878640|1878607-1878640|1878607-1878640|1878607-1878640|1878607-1878640|1878607-1878640|1878607-1878640	NZ_CP018194.1_1878832-1878865|NZ_CP018194.1_1901271-1901304|NZ_CP018194.1_1901724-1901757|NZ_CP018194.1_1888333-1888366|NZ_CP018194.1_1888444-1888477|NZ_CP018194.1_1894203-1894236|NZ_CP018194.1_1899336-1899369|NZ_CP018194.1_1901892-1901925	NA	1	1	Orphan	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA	NA|430aa|up_9|NZ_CP018194.1_1862137_1863427_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|438aa|up_8|NZ_CP018194.1_1863613_1864927_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|268aa|up_7|NZ_CP018194.1_1865057_1865861_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|272aa|up_6|NZ_CP018194.1_1865893_1866709_+	PRK00024, PRK00024, DNA repair protein RadC	NA|238aa|up_5|NZ_CP018194.1_1866798_1867512_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|522aa|up_4|NZ_CP018194.1_1867535_1869101_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|231aa|up_3|NZ_CP018194.1_1869126_1869819_-	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family	NA|444aa|up_2|NZ_CP018194.1_1869937_1871269_+	PRK07492, PRK07492, adenylosuccinate lyase; Provisional	NA|242aa|up_1|NZ_CP018194.1_1871306_1872032_+	pfam05742, TANGO2, Transport and Golgi organisation 2	NA|1021aa|up_0|NZ_CP018194.1_1872103_1875166_-	NF033176, auto_AIDA-I, autotransporter adhesin AIDA-I	NA|3509aa|down_0|NZ_CP018194.1_1879907_1890434_-	NF033176, auto_AIDA-I, autotransporter adhesin AIDA-I	NA|1235aa|down_1|NZ_CP018194.1_1891069_1894774_-	NF033176, auto_AIDA-I, autotransporter adhesin AIDA-I	NA|2272aa|down_2|NZ_CP018194.1_1895305_1902121_-	NF033176, auto_AIDA-I, autotransporter adhesin AIDA-I	NA|255aa|down_3|NZ_CP018194.1_1902522_1903287_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|90aa|down_4|NZ_CP018194.1_1903289_1903559_+	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase	NA|115aa|down_5|NZ_CP018194.1_1903555_1903900_+	pfam18602, Rap1a, Rap1a immunity proteins	NA|232aa|down_6|NZ_CP018194.1_1903910_1904606_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|725aa|down_7|NZ_CP018194.1_1904712_1906887_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|78aa|down_8|NZ_CP018194.1_1906925_1907159_+	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	NA|112aa|down_9|NZ_CP018194.1_1907201_1907537_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family
GCF_001889545.1_ASM188954v1	NZ_CP018194	Granulibacter bethesdensis strain NIH8.1 chromosome, complete genome	5	1928917-1930042	4,5,4	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Type I-E	GGTCTATCTCCGCGCACGCGGAGGAACC,GGTTCCTCCGCGTGCGCGGAGATAGACC,GGTTCCTCCGCGTGCGCGGAGATAGACC	28,28,28	0	0	NA	NA	NA:NA:NA	18,18,18	18	TypeI-E	csa3,cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	NA,NA|154aa|down_1|NZ_CP018194.1_1931884_1932346_-,NA|63aa|down_7|NZ_CP018194.1_1936576_1936765_-	NA|249aa|up_9|NZ_CP018194.1_1918539_1919286_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|215aa|up_8|NZ_CP018194.1_1919297_1919942_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	cas3|850aa|up_7|NZ_CP018194.1_1920203_1922753_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|522aa|up_6|NZ_CP018194.1_1922915_1924481_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|198aa|up_5|NZ_CP018194.1_1924467_1925061_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|387aa|up_4|NZ_CP018194.1_1925053_1926214_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|236aa|up_3|NZ_CP018194.1_1926210_1926918_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|248aa|up_2|NZ_CP018194.1_1926917_1927661_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|300aa|up_1|NZ_CP018194.1_1927664_1928564_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|98aa|up_0|NZ_CP018194.1_1928563_1928857_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|149aa|down_0|NZ_CP018194.1_1930171_1930618_+	PRK07092, PRK07092, benzoylformate decarboxylase; Reviewed	NA|154aa|down_1|NZ_CP018194.1_1931884_1932346_-	NA	NA|213aa|down_2|NZ_CP018194.1_1932365_1933004_-	pfam09998, DUF2239, Uncharacterized protein conserved in bacteria (DUF2239)	NA|105aa|down_3|NZ_CP018194.1_1933643_1933958_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|90aa|down_4|NZ_CP018194.1_1933971_1934241_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|344aa|down_5|NZ_CP018194.1_1934396_1935428_+	PRK12299, obgE, GTPase CgtA; Reviewed	NA|380aa|down_6|NZ_CP018194.1_1935424_1936564_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|63aa|down_7|NZ_CP018194.1_1936576_1936765_-	NA	NA|422aa|down_8|NZ_CP018194.1_1936963_1938229_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|221aa|down_9|NZ_CP018194.1_1938280_1938943_+	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase
