The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	39996	51307	2071812		Synechococcus_phage(33.33%)	7	NA	NA
WP_000668291.1|39996_42150_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	1.0e-44
WP_000801611.1|42162_43512_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_000043310.1|43681_44389_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.3e-41
WP_000361217.1|44445_48171_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.8	1.6e-37
WP_000220632.1|48263_49706_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.7e-55
WP_000182580.1|49742_50765_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.2	7.3e-65
WP_000717501.1|50761_51307_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	9.7e-24
>prophage 2
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	92347	133782	2071812	transposase,tRNA,bacteriocin	Streptococcus_phage(40.0%)	42	NA	NA
WP_001814919.1|92347_93694_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_001257240.1|94765_94963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000808434.1|95199_96264_-	membrane protein	NA	NA	NA	NA	NA
WP_001229057.1|96326_97238_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_000198675.1|97230_97824_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000273854.1|97810_98137_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000744897.1|98275_99442_-	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_000096202.1|99499_100657_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_001035700.1|100698_102549_+	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	30.5	7.6e-28
WP_025168890.1|102444_102849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200898.1|102898_103531_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000500038.1|103552_104425_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
WP_000838912.1|104433_105105_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA	NA
WP_000836450.1|105346_105934_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	56.7	1.6e-27
WP_001189285.1|105985_106306_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073077611.1|106712_107006_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000723961.1|107060_109169_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571330.1|109165_109807_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	4.3e-23
WP_001038474.1|110013_110820_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_099516442.1|110785_111256_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001189278.1|111545_111866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424418.1|112624_112993_+|bacteriocin	SP_0115 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_001268157.1|113391_114255_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000915345.1|114720_115059_+	peptidase C39	NA	NA	NA	NA	NA
WP_000973716.1|115686_115899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424467.1|116314_116677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000356083.1|116657_116903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814711.1|117059_118118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000792250.1|118433_119411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424474.1|119787_120162_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619753.1|120369_121272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424439.1|121327_121681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072924.1|121677_122406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770314.1|123540_123780_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	54.1	7.2e-16
WP_001035384.1|124329_126504_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282969.1|126904_128026_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193634.1|128166_128622_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|128631_130545_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331983.1|130897_132577_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639589.1|132578_132812_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000282479.1|133091_133307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974047.1|133629_133782_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
>prophage 3
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	178420	186246	2071812		Streptococcus_phage(75.0%)	13	NA	NA
WP_001107589.1|178420_179134_-	helix-turn-helix domain-containing protein	NA	Q708R9	Streptococcus_phage	51.9	2.0e-16
WP_000090006.1|179286_179517_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	3.7e-09
WP_000424665.1|179532_180159_+	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	40.8	2.1e-30
WP_000141100.1|180530_180983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000174331.1|180979_181180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001003774.1|181181_181397_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000058832.1|181393_181735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000492137.1|181727_182009_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	67.8	7.9e-30
WP_000158192.1|182143_183010_+	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	75.0	8.2e-126
WP_000434359.1|183062_184532_+	DNA primase family protein	NA	Q9AZI5	Lactococcus_phage	35.0	2.3e-64
WP_000865230.1|184884_185052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000173130.1|185135_185666_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	48.7	2.8e-36
WP_000811078.1|185736_186246_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	53.9	5.8e-47
>prophage 4
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	309442	364061	2071812	holin,transposase,protease,integrase	Streptococcus_phage(23.08%)	47	312290:312303	365443:365456
WP_001063386.1|309442_311548_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.5	1.0e-116
WP_000032550.1|311843_312326_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
312290:312303	attL	CAAGTTCAAAACTT	NA	NA	NA	NA
WP_000743611.1|312420_313905_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156827.1|314057_315665_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_033607364.1|315829_315997_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
WP_000091091.1|316733_318179_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	60.3	2.8e-134
WP_000565355.1|318180_318912_+	capsular polysaccharide biosynthesis protein Cps4B	NA	NA	NA	NA	NA
WP_000664155.1|318920_319613_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	58.5	3.2e-64
WP_001142554.1|319622_320312_+	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	63.7	6.4e-73
WP_001291065.1|320326_321688_+	sugar transferase	NA	NA	NA	NA	NA
WP_001005725.1|321693_322437_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_001076780.1|322433_323258_+	LicD family protein	NA	A0A1V0SD50	Indivirus	38.2	4.0e-05
WP_000458862.1|323259_324138_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000221687.1|324138_325473_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_001085099.1|325500_326925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000723325.1|326989_328078_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	30.2	1.6e-25
WP_000676130.1|328240_329110_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	63.2	2.0e-100
WP_001282454.1|329110_329704_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	32.3	3.3e-09
WP_000141493.1|329715_330765_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	44.5	1.4e-71
WP_000600909.1|330830_331682_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.8	8.6e-27
WP_000842782.1|333167_335150_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001032472.1|335450_340754_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001041857.1|340919_343079_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_000248773.1|343075_343672_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	1.5e-17
WP_000179553.1|343738_344266_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_000200644.1|344335_344677_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711398.1|345162_346320_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039290.1|346332_347727_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158792.1|347802_349227_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	2.7e-41
WP_000518011.1|349238_349928_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000698035.1|350025_350988_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000771129.1|351006_352005_+|holin	choline-binding protein CbpJ	holin	NA	NA	NA	NA
WP_000765684.1|352122_353355_-	MFS transporter	NA	NA	NA	NA	NA
WP_001809487.1|353513_353984_-	lanthionine synthetase	NA	NA	NA	NA	NA
WP_000619581.1|354904_355234_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000163315.1|355355_356234_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373457.1|356215_357169_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562413.1|357155_358163_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210618.1|358146_359157_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224637.1|359233_359932_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743674.1|359928_360924_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698434.1|360937_361570_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001808881.1|361570_361813_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_075218974.1|361737_362049_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_000754501.1|362489_362729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073078456.1|362773_363403_+|protease	serine protease	protease	NA	NA	NA	NA
WP_000378123.1|363701_364061_+|integrase	tyrosine-type recombinase/integrase	integrase	C9E2L6	Enterococcus_phage	41.0	1.4e-18
365443:365456	attR	CAAGTTCAAAACTT	NA	NA	NA	NA
>prophage 5
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	435621	498515	2071812	transposase,protease,tRNA,bacteriocin	Klosneuvirus(18.18%)	55	NA	NA
WP_001810089.1|435621_435792_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000628994.1|436445_437669_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_001059636.1|437835_439158_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000236908.1|439159_441046_+	DUF4838 domain-containing protein	NA	NA	NA	NA	NA
WP_000836781.1|441213_441558_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000429402.1|441567_442980_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_000359753.1|443048_444728_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001809506.1|444853_446293_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691685.1|446296_447646_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|447833_448682_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403169.1|448696_449245_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693286.1|449251_449509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656522.1|449610_451293_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	3.4e-19
WP_001148103.1|451277_452108_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181373.1|452300_452804_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185835.1|453256_453820_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_000678704.1|453833_454460_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867296.1|454486_454876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333653.1|454880_455330_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000418402.1|455457_456045_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105242.1|456434_458042_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	8.9e-142
WP_000026631.1|458600_460232_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795207.1|460520_465461_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|465550_466747_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119900.1|466882_467410_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659547.1|467486_467843_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_001122904.1|467879_469226_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|469321_469441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001220743.1|470007_471288_+	restriction endonuclease subunit S	NA	A0A1V0SKS6	Klosneuvirus	29.8	5.3e-12
WP_000651177.1|471344_472142_+	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.3e-21
WP_000240090.1|472152_472761_+	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	30.1	3.9e-13
WP_000187223.1|472708_474274_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000029054.1|474273_475737_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229085.1|475749_478083_-	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	28.9	2.0e-25
WP_001088687.1|478690_479200_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255769.1|479363_480398_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|480424_480949_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|481428_483252_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000115730.1|483264_483618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066299.1|483822_484959_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.0	1.2e-23
WP_001808905.1|485280_485475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777760.1|485636_485924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278301.1|485933_486344_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889923.1|486411_487143_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653752.1|487139_488189_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132575.1|488356_488686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682122.1|488961_489300_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219126.1|489304_490042_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000275284.1|490054_491395_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_001821303.1|491634_492981_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_000358814.1|493147_493303_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069099.1|493359_494721_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_001093269.1|496264_496513_+|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000483697.1|496528_496738_+|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000497530.1|497939_498515_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 6
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	728737	735743	2071812		Streptococcus_phage(42.86%)	10	NA	NA
WP_000405832.1|728737_729232_+	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_001170347.1|729231_729762_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
WP_000889093.1|729755_730112_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001103449.1|730269_731070_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000590990.1|731069_731813_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	2.8e-29
WP_000926600.1|731890_732115_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000272311.1|732180_733092_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	2.9e-89
WP_000855734.1|733129_733858_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_001272941.1|733902_734514_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000930003.1|735026_735743_+	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	30.9	2.1e-26
>prophage 7
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	849436	912510	2071812	holin,transposase,protease	Indivirus(15.79%)	57	NA	NA
WP_000895725.1|849436_850336_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_001814694.1|850379_851906_-	ABC-F family ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.9	1.3e-09
WP_000773235.1|852664_853207_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000244451.1|853206_853836_+	endonuclease III	NA	NA	NA	NA	NA
WP_000850024.1|854046_854568_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_001293845.1|854586_855510_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	8.7e-25
WP_000166701.1|855559_856639_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.9	6.3e-59
WP_001126406.1|856951_860128_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_001199645.1|860402_861212_-|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	30.3	4.5e-09
WP_000811992.1|861213_862017_-|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	5.3e-10
WP_000835917.1|862026_863514_-	type IV teichoic acid flippase TacF	NA	NA	NA	NA	NA
WP_000638502.1|863849_864557_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000609885.1|864561_865584_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_000411215.1|865600_866470_+|holin	choline kinase LicA	holin	NA	NA	NA	NA
WP_000837618.1|866459_867338_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000643970.1|867349_868039_+	NTP transferase domain-containing protein	NA	A0A127AW70	Bacillus_phage	45.0	3.4e-05
WP_000705301.1|868134_868983_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	39.1	1.2e-33
WP_001812883.1|869864_870908_+	TIGR00341 family protein	NA	NA	NA	NA	NA
WP_000179644.1|871074_873162_+	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	37.6	1.0e-105
WP_001237223.1|873267_873627_+	YbaN family protein	NA	NA	NA	NA	NA
WP_000638786.1|873719_874352_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000461600.1|874395_875052_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_001010953.1|875070_875703_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_000225489.1|875730_876165_+	DNA topoisomerase I	NA	NA	NA	NA	NA
WP_001074730.1|876176_877214_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_000762426.1|877210_877480_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_000929149.1|877483_877843_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_001042415.1|878793_880725_+	McrB family protein	NA	K4I1H4	Acidithiobacillus_phage	33.7	1.8e-16
WP_001816429.1|880711_882028_+	McrC family protein	NA	NA	NA	NA	NA
WP_000931158.1|882202_883189_+	GMP reductase	NA	G3MBI2	Bacillus_virus	72.2	1.4e-137
WP_000661503.1|883506_884205_+	ribonuclease III	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	33.3	1.1e-24
WP_000280942.1|884195_887735_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_000153016.1|887731_888526_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000763457.1|888525_889344_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000522312.1|889347_890637_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_000096139.1|890680_892168_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	33.0	4.9e-70
WP_001096313.1|892316_893057_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.1	2.0e-32
WP_000726258.1|893056_895222_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000792112.1|895391_896345_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000610410.1|896421_898410_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
WP_000639833.1|898419_898983_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000237188.1|898948_899437_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000091545.1|899509_899977_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
WP_000159178.1|899973_900489_-	transcription repressor NadR	NA	NA	NA	NA	NA
WP_001097402.1|900500_901028_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000747408.1|901323_901887_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001284130.1|901870_902422_-	phosphopantothenoylcysteine decarboxylase	NA	A0A068EHP1	Penguinpox_virus	37.6	5.2e-25
WP_000699489.1|902433_903123_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_000845287.1|903352_905023_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_000886147.1|905351_906527_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_000722076.1|906581_907286_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	2.8e-39
WP_000886210.1|907278_908628_+	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.6	1.8e-34
WP_001289493.1|908629_909439_+	MBL fold metallo-hydrolase	NA	A0A0C5AFC1	Paenibacillus_phage	39.0	1.8e-34
WP_000208080.1|909529_909772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001823353.1|909773_910028_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000731129.1|910074_910848_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	48.6	8.9e-23
WP_001814919.1|911163_912510_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
>prophage 8
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	1157118	1210906	2071812	protease,integrase,transposase,holin,tRNA,bacteriocin	Streptococcus_phage(44.44%)	45	1161484:1161528	1214568:1214612
WP_000083731.1|1157118_1158453_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001166874.1|1158639_1159518_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	1.7e-115
WP_000358228.1|1159520_1159838_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_000806706.1|1159877_1160768_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
WP_000033363.1|1160764_1161403_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	2.2e-75
1161484:1161528	attL	ATACTCAATGAAAATCAAAGAGCAAACTAGGAAGCTAGCCGCAGG	NA	NA	NA	NA
WP_000689706.1|1161622_1162420_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	8.0e-59
WP_000254684.1|1162423_1163686_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.3	4.2e-139
WP_001844793.1|1163695_1164826_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000728257.1|1164905_1166789_-|holin	phosphorylcholine esterase CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	23.7	9.5e-10
WP_000403195.1|1166791_1167679_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	1.3e-09
WP_000745389.1|1167668_1168130_-	signal peptidase II	NA	NA	NA	NA	NA
WP_001025704.1|1168126_1169035_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
WP_001809535.1|1169027_1169225_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000745372.1|1169276_1169948_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000602451.1|1170001_1170223_-|bacteriocin	SP_0924 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000593571.1|1170494_1171304_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001246755.1|1171484_1172360_-	N-carbamoylputrescine amidase	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.1e-77
WP_000969458.1|1172369_1173455_-	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	48.1	2.8e-91
WP_000764377.1|1173451_1174579_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_000088782.1|1174578_1175838_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_000366713.1|1175834_1176695_-	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_001270407.1|1176725_1176863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000661006.1|1177630_1179106_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_001153814.1|1179812_1180688_+|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	31.3	8.0e-28
WP_029645384.1|1180683_1181262_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA	NA
WP_000489404.1|1181304_1183293_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000173358.1|1183294_1184053_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	7.7e-27
WP_000680766.1|1184480_1184672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085044.1|1185025_1185298_-	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_000778595.1|1185356_1185806_-	SprT family protein	NA	NA	NA	NA	NA
WP_000359141.1|1185792_1187922_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_000123613.1|1188333_1189239_+	permease	NA	NA	NA	NA	NA
WP_000617843.1|1189235_1190051_+	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_000759775.1|1190180_1190897_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000749599.1|1191845_1192718_-	DUF4300 family protein	NA	NA	NA	NA	NA
WP_001821303.1|1194229_1195576_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_001042807.1|1196078_1197584_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_000820836.1|1197642_1198650_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_000561516.1|1198732_1201834_-	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.8	6.8e-114
WP_001212037.1|1202180_1204454_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_001042996.1|1204470_1204941_+	arginine repressor	NA	NA	NA	NA	NA
WP_000692989.1|1205057_1205213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000526343.1|1205483_1208834_-	DEAD/DEAH box helicase family protein	NA	A0A2H4P9W3	Gordonia_phage	24.8	1.4e-11
WP_000756225.1|1208863_1209907_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000444456.1|1209940_1210906_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.8e-33
1214568:1214612	attR	CCTGCGGCTAGCTTCCTAGTTTGCTCTTTGATTTTCATTGAGTAT	NA	NA	NA	NA
>prophage 9
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	1273229	1323877	2071812	transposase,tRNA,protease,bacteriocin	Streptococcus_phage(23.08%)	44	NA	NA
WP_000882517.1|1273229_1275488_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	40.4	4.6e-128
WP_000767193.1|1277260_1277560_+	DUF1827 family protein	NA	NA	NA	NA	NA
WP_000064821.1|1281332_1283060_-	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_000134044.1|1283141_1285088_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	45.3	6.1e-145
WP_001809365.1|1285102_1285666_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000241397.1|1285750_1286305_-	DJ-1/PfpI family protein	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	27.2	6.4e-07
WP_000830659.1|1286315_1287539_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_000848713.1|1287575_1290026_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	47.5	8.4e-200
WP_000411851.1|1290225_1291155_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_001145226.1|1291294_1291582_+	DUF3270 domain-containing protein	NA	NA	NA	NA	NA
WP_000491790.1|1291615_1292950_-	two-component system sensor histidine kinase CiaH	NA	Q8QNA2	Ectocarpus_siliculosus_virus	34.0	1.2e-06
WP_000590640.1|1292939_1293614_-	two-component system response regulator CiaR	NA	W8CYM9	Bacillus_phage	33.6	3.1e-27
WP_001149107.1|1293722_1296269_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	27.2	7.4e-74
WP_000188827.1|1296391_1296832_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_001245817.1|1296806_1297676_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000403351.1|1297653_1298154_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000167112.1|1298164_1298863_-	3-oxoacyl-ACP reductase	NA	A0A0K0KVL6	Prochlorococcus_phage	30.9	2.8e-07
WP_001808490.1|1298855_1299122_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_001269466.1|1299187_1300114_-	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA	NA
WP_000738401.1|1300188_1301004_-	membrane protein	NA	NA	NA	NA	NA
WP_000665420.1|1301007_1301328_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001291375.1|1301883_1303881_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	30.8	4.7e-84
WP_001180425.1|1304004_1305264_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000811482.1|1305265_1305967_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	43.9	4.0e-38
WP_000728653.1|1305950_1307150_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_001209571.1|1307435_1308782_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_000709032.1|1308978_1309515_+	biotin transporter BioY	NA	NA	NA	NA	NA
WP_000807422.1|1309720_1309936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001216108.1|1310033_1310354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001196049.1|1310383_1310722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000686921.1|1310733_1311453_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_001105899.1|1311442_1311961_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000819181.1|1311991_1312780_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001816467.1|1313326_1314673_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_001040724.1|1315133_1316330_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_000348122.1|1317240_1318110_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248982.1|1318332_1318854_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_001821371.1|1318825_1319917_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_000935666.1|1320027_1320282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200308.1|1320621_1321155_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001811210.1|1321141_1321357_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001811209.1|1321323_1321467_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000121714.1|1321700_1323419_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.2	3.4e-272
WP_000434649.1|1323529_1323877_+|bacteriocin	PedC/BrcD family bacteriocin maturation disulfide isomerase	bacteriocin	NA	NA	NA	NA
>prophage 10
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	1391667	1398426	2071812	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081004.1|1391667_1392636_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	99.2	1.8e-65
WP_000011306.1|1392669_1393581_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
WP_001231086.1|1393577_1394555_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163033.1|1394551_1395442_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
WP_001140412.1|1395493_1395874_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|1395884_1396472_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_001814787.1|1396480_1397713_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.7	4.2e-131
WP_000442260.1|1397749_1397920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162475.1|1397919_1398426_-	dihydrofolate reductase	NA	A0A1B2IAU3	Erwinia_phage	31.1	7.4e-18
>prophage 11
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	1653292	1660707	2071812		uncultured_Mediterranean_phage(33.33%)	11	NA	NA
WP_001814725.1|1653292_1654012_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.2	4.7e-34
WP_001838026.1|1654008_1654203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000778475.1|1654499_1655459_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	2.4e-57
WP_001193665.1|1655448_1656405_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764303.1|1656401_1657154_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	5.6e-14
WP_000858260.1|1657249_1658215_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001842220.1|1658242_1658359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000821640.1|1658439_1658682_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
WP_001222228.1|1658681_1659404_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_050274983.1|1659390_1659960_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
WP_000351913.1|1659978_1660707_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	4.1e-09
>prophage 12
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	1742157	1771578	2071812	transposase,bacteriocin,integrase	Streptococcus_phage(89.29%)	33	1733857:1733872	1774122:1774137
1733857:1733872	attL	AATAATCACTGCACCA	NA	NA	NA	NA
WP_000420682.1|1742157_1742472_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1742487_1742874_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813494.1|1742902_1744288_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	99.8	1.9e-265
WP_000879507.1|1744290_1744443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814870.1|1744465_1745728_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	99.0	3.1e-230
WP_029645760.1|1745672_1745885_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	78.7	1.5e-12
WP_001814874.1|1745933_1746017_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001038795.1|1746141_1746879_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	3.1e-134
WP_000019067.1|1747135_1748383_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	23.9	3.9e-12
WP_001009056.1|1748562_1748784_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1748900_1749398_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1749372_1749879_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1749862_1752310_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_001814875.1|1752312_1754490_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	98.6	0.0e+00
WP_000769868.1|1754486_1755488_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|1755484_1756417_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|1756661_1756778_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691729.1|1756793_1758713_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	97.3	0.0e+00
WP_001813542.1|1759076_1759322_+	hypothetical protein	NA	A0A1B0RXA7	Streptococcus_phage	98.8	2.6e-37
WP_000806926.1|1759318_1759654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000567222.1|1759666_1760035_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	97.5	1.1e-58
WP_001072467.1|1760021_1760321_+	hypothetical protein	NA	A0A1B0RX98	Streptococcus_phage	96.0	1.8e-48
WP_000420313.1|1760438_1761902_-	ABC-F type ribosomal protection protein Msr(D)	NA	A0A1B0RXA0	Streptococcus_phage	97.3	3.7e-251
WP_000417519.1|1762021_1763239_-	macrolide efflux MFS transporter Mef(A)	NA	A0A2K5B2B5	Erysipelothrix_phage	90.6	5.1e-198
WP_000873143.1|1763624_1763795_-	hypothetical protein	NA	A0A1X9I6E4	Streptococcus_phage	98.2	3.7e-22
WP_001860868.1|1764316_1764508_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	69.4	5.4e-14
WP_001227347.1|1764567_1764921_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|1765425_1765848_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|1765844_1766075_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|1766535_1766739_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|1766820_1768038_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000732395.1|1768928_1770944_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571425.1|1770945_1771578_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.9	2.8e-22
1774122:1774137	attR	AATAATCACTGCACCA	NA	NA	NA	NA
>prophage 13
NZ_CP018137	Streptococcus pneumoniae strain SP61 chromosome, complete genome	2071812	2049997	2058751	2071812		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|2049997_2050837_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
WP_000835715.1|2050821_2051649_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.8e-22
WP_000712136.1|2051645_2052191_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227958.1|2052201_2053023_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170193.1|2053064_2054348_-	insulinase family protein	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	29.5	7.1e-17
WP_000424257.1|2054344_2055595_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.1	6.0e-93
WP_000455903.1|2055753_2056122_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266662.1|2056124_2057222_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|2057272_2058751_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
