assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001900225.1_ASM190022v1	NZ_CP013478	Pseudomonas aeruginosa strain SCVJan, complete genome	1	348034-348147	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|168aa|down_2|NZ_CP013478.1_352719_353223_-,NA|251aa|down_5|NZ_CP013478.1_354976_355729_-,NA|185aa|down_7|NZ_CP013478.1_356497_357052_-	NA|293aa|up_9|NZ_CP013478.1_334880_335759_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP013478.1_335921_336587_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP013478.1_336649_337711_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP013478.1_337966_339343_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP013478.1_339621_340374_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP013478.1_340414_341773_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP013478.1_341838_343209_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP013478.1_343324_344428_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP013478.1_344846_345944_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP013478.1_345998_347153_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP013478.1_349190_351578_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP013478.1_351688_352741_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP013478.1_352719_353223_-	NA	NA|204aa|down_3|NZ_CP013478.1_353327_353939_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP013478.1_353937_354957_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP013478.1_354976_355729_-	NA	NA|233aa|down_6|NZ_CP013478.1_355777_356476_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP013478.1_356497_357052_-	NA	NA|165aa|down_8|NZ_CP013478.1_357317_357812_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|234aa|down_9|NZ_CP013478.1_357814_358516_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_001900225.1_ASM190022v1	NZ_CP013478	Pseudomonas aeruginosa strain SCVJan, complete genome	2	2793712-2794634	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-F	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	14,15,15	15	TypeI-F	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|82aa|up_7|NZ_CP013478.1_2773555_2773801_-,NA|266aa|up_1|NZ_CP013478.1_2791449_2792247_-,NA|105aa|down_6|NZ_CP013478.1_2804534_2804849_-	NA|70aa|up_9|NZ_CP013478.1_2772308_2772518_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_8|NZ_CP013478.1_2772514_2773519_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_7|NZ_CP013478.1_2773555_2773801_-	NA	NA|305aa|up_6|NZ_CP013478.1_2774062_2774977_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_5|NZ_CP013478.1_2775152_2776166_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_4|NZ_CP013478.1_2776245_2776809_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_3|NZ_CP013478.1_2777451_2778216_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_2|NZ_CP013478.1_2778288_2791317_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_1|NZ_CP013478.1_2791449_2792247_-	NA	NA|171aa|up_0|NZ_CP013478.1_2792804_2793317_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|NZ_CP013478.1_2794757_2795321_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|NZ_CP013478.1_2795324_2796353_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|NZ_CP013478.1_2796363_2797347_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|down_3|NZ_CP013478.1_2797333_2798638_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|NZ_CP013478.1_2798695_2801926_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|NZ_CP013478.1_2801922_2802897_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|NZ_CP013478.1_2804534_2804849_-	NA	NA|307aa|down_7|NZ_CP013478.1_2805438_2806359_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|462aa|down_8|NZ_CP013478.1_2806391_2807777_-	pfam03573, OprD, outer membrane porin, OprD family	NA|209aa|down_9|NZ_CP013478.1_2807886_2808513_-	cd01012, YcaC_related, YcaC related amidohydrolases; E
GCF_001900225.1_ASM190022v1	NZ_CP013478	Pseudomonas aeruginosa strain SCVJan, complete genome	3	2803159-2804265	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-F	GTTCACTGCCGTGTAGGCAGCTAAGAAA,TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	18,18,18	18	TypeI-F	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|266aa|up_7|NZ_CP013478.1_2791449_2792247_-,NA|105aa|down_0|NZ_CP013478.1_2804534_2804849_-	NA|255aa|up_9|NZ_CP013478.1_2777451_2778216_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_8|NZ_CP013478.1_2778288_2791317_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_7|NZ_CP013478.1_2791449_2792247_-	NA	NA|171aa|up_6|NZ_CP013478.1_2792804_2793317_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|NZ_CP013478.1_2794757_2795321_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|NZ_CP013478.1_2795324_2796353_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|NZ_CP013478.1_2796363_2797347_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|up_2|NZ_CP013478.1_2797333_2798638_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|NZ_CP013478.1_2798695_2801926_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|NZ_CP013478.1_2801922_2802897_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|NZ_CP013478.1_2804534_2804849_-	NA	NA|307aa|down_1|NZ_CP013478.1_2805438_2806359_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|462aa|down_2|NZ_CP013478.1_2806391_2807777_-	pfam03573, OprD, outer membrane porin, OprD family	NA|209aa|down_3|NZ_CP013478.1_2807886_2808513_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|227aa|down_4|NZ_CP013478.1_2808567_2809248_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_5|NZ_CP013478.1_2809345_2810206_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_6|NZ_CP013478.1_2810306_2811245_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|546aa|down_7|NZ_CP013478.1_2811248_2812886_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_8|NZ_CP013478.1_2813244_2813670_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_9|NZ_CP013478.1_2813662_2814982_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
GCF_001900225.1_ASM190022v1	NZ_CP013478	Pseudomonas aeruginosa strain SCVJan, complete genome	4	4112486-4113551	4,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	17,17,16	17	TypeI-E	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|415aa|up_1|NZ_CP013478.1_4109727_4110972_-,NA	NA|527aa|up_9|NZ_CP013478.1_4098109_4099690_+	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|335aa|up_8|NZ_CP013478.1_4099793_4100798_-	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion]	NA|542aa|up_7|NZ_CP013478.1_4101037_4102663_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|132aa|up_6|NZ_CP013478.1_4102675_4103071_-	pfam02974, Inh, Protease inhibitor Inh	NA|480aa|up_5|NZ_CP013478.1_4103317_4104757_-	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|482aa|up_4|NZ_CP013478.1_4105115_4106561_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|433aa|up_3|NZ_CP013478.1_4106564_4107863_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|594aa|up_2|NZ_CP013478.1_4107859_4109641_-	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|415aa|up_1|NZ_CP013478.1_4109727_4110972_-	NA	NA|114aa|up_0|NZ_CP013478.1_4111985_4112327_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|down_0|NZ_CP013478.1_4113615_4113915_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|down_1|NZ_CP013478.1_4113911_4114802_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|down_2|NZ_CP013478.1_4114828_4115440_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|down_3|NZ_CP013478.1_4115414_4116077_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|down_4|NZ_CP013478.1_4116078_4117221_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_5|NZ_CP013478.1_4117230_4117761_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|down_6|NZ_CP013478.1_4117757_4119326_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|down_7|NZ_CP013478.1_4119328_4122001_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|859aa|down_8|NZ_CP013478.1_4123743_4126320_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_9|NZ_CP013478.1_4126342_4128115_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families
GCF_001900225.1_ASM190022v1	NZ_CP013478	Pseudomonas aeruginosa strain SCVJan, complete genome	5	4122722-4123482	5,4,4	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	12,12,11	12	TypeI-E	csa3,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,WYL,RT,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|415aa|up_9|NZ_CP013478.1_4109727_4110972_-,NA	NA|415aa|up_9|NZ_CP013478.1_4109727_4110972_-	NA	NA|114aa|up_8|NZ_CP013478.1_4111985_4112327_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|up_7|NZ_CP013478.1_4113615_4113915_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|up_6|NZ_CP013478.1_4113911_4114802_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|up_5|NZ_CP013478.1_4114828_4115440_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|up_4|NZ_CP013478.1_4115414_4116077_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|up_3|NZ_CP013478.1_4116078_4117221_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|up_2|NZ_CP013478.1_4117230_4117761_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|up_1|NZ_CP013478.1_4117757_4119326_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|up_0|NZ_CP013478.1_4119328_4122001_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|859aa|down_0|NZ_CP013478.1_4123743_4126320_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_1|NZ_CP013478.1_4126342_4128115_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|187aa|down_2|NZ_CP013478.1_4128194_4128755_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|266aa|down_3|NZ_CP013478.1_4128919_4129717_+	PRK06563, PRK06563, crotonase/enoyl-CoA hydratase family protein	NA|295aa|down_4|NZ_CP013478.1_4129773_4130658_+	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|483aa|down_5|NZ_CP013478.1_4131040_4132489_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|384aa|down_6|NZ_CP013478.1_4132485_4133637_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|504aa|down_7|NZ_CP013478.1_4133626_4135138_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|261aa|down_8|NZ_CP013478.1_4135140_4135923_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|168aa|down_9|NZ_CP013478.1_4136114_4136618_+	pfam14595, Thioredoxin_9, Thioredoxin
