assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001901185.1_ASM190118v1	NZ_CP010219	Escherichia coli strain M18 chromosome, complete genome	1	1672520-1673037	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	TypeI-E	RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	NA,NA	NA|254aa|up_9|NZ_CP010219.1_1664331_1665093_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP010219.1_1665073_1666123_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP010219.1_1666119_1666599_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP010219.1_1666598_1667309_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP010219.1_1667327_1667639_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP010219.1_1667832_1668156_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP010219.1_1668205_1668811_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP010219.1_1668810_1670238_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP010219.1_1670239_1671148_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP010219.1_1671399_1672437_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP010219.1_1673133_1673427_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP010219.1_1673423_1674347_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP010219.1_1674343_1674994_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP010219.1_1674975_1675722_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP010219.1_1675732_1676788_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP010219.1_1676799_1677336_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|NZ_CP010219.1_1677332_1678895_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP010219.1_1678992_1681692_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP010219.1_1681885_1682038_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP010219.1_1682302_1683037_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_001901185.1_ASM190118v1	NZ_CP010219	Escherichia coli strain M18 chromosome, complete genome	2	1698736-1699984	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAAC	29,29,27	0	0	NA	NA	I-E:I-E:I-E	20,20,19	20	Unclear	RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	NA,NA|47aa|down_1|NZ_CP010219.1_1701133_1701274_+	NA|424aa|up_9|NZ_CP010219.1_1687379_1688651_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP010219.1_1688641_1688902_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP010219.1_1688918_1689494_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP010219.1_1689641_1690502_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP010219.1_1690498_1691278_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NZ_CP010219.1_1691255_1692665_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP010219.1_1692686_1694141_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP010219.1_1694210_1694996_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP010219.1_1695314_1696592_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP010219.1_1696618_1698097_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP010219.1_1700323_1700995_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP010219.1_1701133_1701274_+	NA	NA|433aa|down_2|NZ_CP010219.1_1702219_1703518_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_CP010219.1_1703605_1705243_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_CP010219.1_1705470_1706262_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_CP010219.1_1706332_1706668_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_CP010219.1_1706667_1706916_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_CP010219.1_1706993_1709228_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_CP010219.1_1709275_1710577_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_CP010219.1_1710633_1713390_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
GCF_001901185.1_ASM190118v1	NZ_CP010219	Escherichia coli strain M18 chromosome, complete genome	3	4449253-4449392	3	CRISPRCasFinder	no		RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	Orphan	CGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAC	47	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	NA,NA	NA|50aa|up_9|NZ_CP010219.1_4438232_4438382_+	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ	NA|258aa|up_8|NZ_CP010219.1_4438548_4439322_+	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|230aa|up_7|NZ_CP010219.1_4439321_4440011_+	PRK09421, modB, molybdate ABC transporter permease subunit	NA|353aa|up_6|NZ_CP010219.1_4440013_4441072_+	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|273aa|up_5|NZ_CP010219.1_4441072_4441891_-	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|332aa|up_4|NZ_CP010219.1_4442045_4443041_+	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|318aa|up_3|NZ_CP010219.1_4443081_4444035_-	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|351aa|up_2|NZ_CP010219.1_4444218_4445271_+	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|478aa|up_1|NZ_CP010219.1_4445346_4446780_+	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|754aa|up_0|NZ_CP010219.1_4446962_4449224_+	PRK11413, PRK11413, putative hydratase; Provisional	NA|428aa|down_0|NZ_CP010219.1_4449457_4450741_-	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|159aa|down_1|NZ_CP010219.1_4450892_4451369_-	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|430aa|down_2|NZ_CP010219.1_4451427_4452717_-	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|347aa|down_3|NZ_CP010219.1_4452803_4453844_+	PRK15108, PRK15108, biotin synthase; Provisional	NA|385aa|down_4|NZ_CP010219.1_4453840_4454995_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|252aa|down_5|NZ_CP010219.1_4454981_4455737_+	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|226aa|down_6|NZ_CP010219.1_4455729_4456407_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|674aa|down_7|NZ_CP010219.1_4456985_4459007_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|303aa|down_8|NZ_CP010219.1_4459198_4460107_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|330aa|down_9|NZ_CP010219.1_4460503_4461493_+	PRK00164, moaA, GTP 3',8-cyclase MoaA
GCF_001901185.1_ASM190118v1	NZ_CP010219	Escherichia coli strain M18 chromosome, complete genome	4	4569040-4569188	4	CRISPRCasFinder	no		RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	Orphan	GTTCACTGCCGTACAGACAGCTTAGAAAT	29	0	0	NA	NA	I-F	2	2	Orphan	RT,cas3,c2c9_V-U4,DEDDh,DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j	NA,NA	NA|551aa|up_9|NZ_CP010219.1_4555446_4557099_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NZ_CP010219.1_4557242_4558142_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NZ_CP010219.1_4558637_4559333_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NZ_CP010219.1_4559758_4561417_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NZ_CP010219.1_4561413_4562370_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NZ_CP010219.1_4562520_4563636_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP010219.1_4563632_4565579_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NZ_CP010219.1_4565651_4565876_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NZ_CP010219.1_4566198_4566519_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NZ_CP010219.1_4566549_4568826_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|down_0|NZ_CP010219.1_4569748_4569967_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP010219.1_4570251_4570956_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP010219.1_4570997_4572719_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP010219.1_4572719_4574486_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|NZ_CP010219.1_4574608_4575574_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP010219.1_4576118_4576613_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1369aa|down_6|NZ_CP010219.1_4576747_4580854_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NZ_CP010219.1_4581008_4581620_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP010219.1_4581630_4582974_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP010219.1_4583064_4584357_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
