The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	49938	56033	4121999		Staphylococcus_phage(66.67%)	8	NA	NA
WP_014480162.1|49938_51024_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.1	6.6e-56
WP_014480161.1|51034_51682_+	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	45.9	8.5e-43
WP_014480160.1|51696_52893_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.9	4.1e-115
WP_003223915.1|52925_53390_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	60.0	5.5e-44
WP_003223910.1|53502_53877_+	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA	NA
WP_014480159.1|53890_54415_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_014477220.1|54694_55450_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	29.2	5.5e-09
WP_014480158.1|55439_56033_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	35.4	2.6e-14
>prophage 2
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	268471	294614	4121999	transposase,holin	Bacillus_phage(60.0%)	29	NA	NA
WP_121509415.1|268471_269908_-	flavin monoamine oxidase family protein	NA	A0A2K9L022	Tupanvirus	30.6	2.6e-07
WP_029318053.1|270035_270593_+	SMI1/KNR4 family protein	NA	O64022	Bacillus_phage	95.7	7.0e-102
WP_014479999.1|270691_272494_+	type II toxin-antitoxin system toxin ribonuclease YobL	NA	A0A1P8CWI7	Bacillus_phage	87.0	1.3e-218
WP_003231326.1|272503_272962_+	type II toxin-antitoxin system antitoxin YobK	NA	NA	NA	NA	NA
WP_014479998.1|273054_273513_+	hypothetical protein	NA	A0A1P8CWJ1	Bacillus_phage	85.5	2.8e-72
WP_014479997.1|273568_274123_+	SMI1/KNR4 family protein	NA	O64025	Bacillus_phage	91.3	4.3e-96
WP_014479996.1|274182_274716_+	GNAT family N-acetyltransferase	NA	O64026	Bacillus_phage	97.2	2.9e-97
WP_072592542.1|275004_275088_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_033881859.1|275347_275707_+	hypothetical protein	NA	A0A1P8CWJ9	Bacillus_phage	98.3	2.2e-61
WP_031600262.1|277913_279161_-|transposase	IS256-like element ISBsu2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.6e-24
WP_080480860.1|279244_280477_+	MFS transporter	NA	NA	NA	NA	NA
WP_033881552.1|280488_281319_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_052006225.1|281323_282469_+	ThiF family adenylyltransferase	NA	A0A1V0SCZ9	Indivirus	21.1	4.3e-05
WP_031601042.1|282828_283953_-|transposase	IS4-like element IS4Bsu1 family transposase	transposase	NA	NA	NA	NA
WP_072592540.1|284166_284811_+	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
WP_069837923.1|284929_285283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087614174.1|285317_285542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881215.1|285586_285979_+	UPF0715 family protein	NA	O64087	Bacillus_phage	81.4	3.7e-49
WP_033881214.1|285988_286219_-	membrane protein	NA	NA	NA	NA	NA
WP_033881218.1|286352_287780_+	serine hydrolase	NA	NA	NA	NA	NA
WP_033881213.1|288148_288400_+	hypothetical protein	NA	A0A1P8CWV6	Bacillus_phage	96.4	1.0e-36
WP_033881211.1|288636_288780_+	hypothetical protein	NA	A0A1P8CWV9	Bacillus_phage	92.5	9.6e-16
WP_031600262.1|288852_290100_+|transposase	IS256-like element ISBsu2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.6e-24
WP_033881696.1|290559_290793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052006227.1|290829_291069_+	DUF4365 domain-containing protein	NA	NA	NA	NA	NA
WP_087614160.1|291109_292260_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	61.2	1.7e-38
WP_033881179.1|292619_292916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142767572.1|293095_293365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031600262.1|293366_294614_-|transposase	IS256-like element ISBsu2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.6e-24
>prophage 3
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	369439	462308	4121999	coat,transposase,tail,head,protease,holin,integrase,plate,portal,terminase,capsid	Bacillus_phage(55.32%)	103	419851:419866	463697:463712
WP_072592538.1|369439_369832_+|coat	outer spore coat protein CotM	coat	NA	NA	NA	NA
WP_003231580.1|370065_370494_+	DUF2621 domain-containing protein	NA	NA	NA	NA	NA
WP_010886519.1|370524_371016_-	CcdC family protein	NA	NA	NA	NA	NA
WP_003245707.1|371094_371457_-	response regulator	NA	NA	NA	NA	NA
WP_003231585.1|371545_372253_-	cytochrome c-type biogenesis protein CcdA	NA	NA	NA	NA	NA
WP_010886518.1|372472_372646_+	aspartyl-phosphate phosphatase YnzD	NA	NA	NA	NA	NA
WP_003221221.1|372719_372938_-	YneF family protein	NA	NA	NA	NA	NA
WP_003231591.1|373023_373470_-	sporulation inhibitor of replication protein SirA	NA	NA	NA	NA	NA
WP_014476936.1|373622_375626_-	transketolase	NA	NA	NA	NA	NA
WP_003231595.1|375794_376028_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_014479938.1|376091_376745_-	recombinase family protein	NA	NA	NA	NA	NA
WP_003231598.1|376763_377081_-	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003238209.1|377230_377848_+	repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.3	2.5e-15
WP_014479937.1|378397_378817_-	metallothiol transferase FosB	NA	Q2LI91	Bacillus_phage	66.1	2.0e-40
WP_031600569.1|378935_379475_+	YndM family protein	NA	NA	NA	NA	NA
WP_014479934.1|379501_380260_-	gamma-polyglutamate hydrolase PghL	NA	O64134	Bacillus_phage	52.9	3.3e-54
WP_014479931.1|380888_382529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479930.1|382510_383143_-	DUF4166 domain-containing protein	NA	NA	NA	NA	NA
WP_014479929.1|383147_383954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003231626.1|386614_386803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003231627.1|387109_387544_+	SRPBCC domain-containing protein	NA	NA	NA	NA	NA
WP_014478984.1|387670_389023_-|transposase	IS1182 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	41.8	1.4e-87
WP_009967329.1|389184_389583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003231634.1|389836_390025_+	twin-arginine translocase TatAC	NA	NA	NA	NA	NA
WP_014479921.1|390199_390400_+|coat	spore coat protein CotC	coat	NA	NA	NA	NA
WP_014479920.1|390645_391002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479919.1|391161_391881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_121509411.1|391923_392211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479918.1|392333_393173_-	thymidylate synthase	NA	A0A1P8CX42	Bacillus_phage	98.2	5.6e-164
WP_003231643.1|393447_393612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881937.1|394018_394282_+|coat	spore coat protein CotU	coat	NA	NA	NA	NA
WP_014479915.1|394882_395317_-	dUTP diphosphatase	NA	A0A1P8CX51	Bacillus_phage	92.3	5.8e-72
WP_014479913.1|396235_396661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031600564.1|397071_398256_+	alanine racemase	NA	NA	NA	NA	NA
WP_033881939.1|398357_399773_-	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_014479910.1|400185_400821_+	endonuclease YncB	NA	A0A1P8CWK6	Bacillus_phage	68.5	7.7e-73
WP_031600262.1|400950_402198_-|transposase	IS256-like element ISBsu2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.6e-24
WP_014479909.1|402682_404182_-	xylulokinase	NA	NA	NA	NA	NA
WP_014479908.1|404332_405670_-	xylose isomerase	NA	NA	NA	NA	NA
WP_014479907.1|405907_407062_+	ROK family protein	NA	NA	NA	NA	NA
WP_014479906.1|407199_408801_-	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
WP_033880480.1|408939_409854_-|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	22.9	9.0e-06
WP_014479904.1|409850_410168_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_014479903.1|410240_411632_-	MFS transporter	NA	NA	NA	NA	NA
WP_014479902.1|412428_412899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479901.1|413038_413203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479898.1|414714_414945_-	helix-turn-helix transcriptional regulator	NA	A0A1P8CWU2	Bacillus_phage	75.0	2.1e-20
WP_029726895.1|415486_415867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881852.1|415944_416844_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014479132.1|416840_417995_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.4e-24
WP_014480339.1|418157_419705_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_014479891.1|419701_420460_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	38.6	5.8e-43
419851:419866	attL	AAGAAAACGTGAAGTA	NA	NA	NA	NA
WP_072592598.1|421502_421937_-	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_014479887.1|422120_422372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479885.1|423702_424194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881290.1|424432_424723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049832641.1|425319_425520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479884.1|425556_426642_+	DUF4917 family protein	NA	NA	NA	NA	NA
WP_080283100.1|426657_426729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881288.1|426898_428662_+	ribonuclease YeeF family protein	NA	A0A1P8CWI7	Bacillus_phage	52.3	3.3e-121
WP_031600558.1|428680_429145_+	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_031600557.1|429190_430168_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A218KC88	Bacillus_phage	71.4	2.0e-64
WP_031600556.1|430223_430487_-|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	66.7	2.7e-24
WP_031600555.1|430501_430714_-	hypothetical protein	NA	A0A290GDY2	Caldibacillus_phage	59.4	1.9e-15
WP_031600554.1|430765_430936_-	XkdX family protein	NA	NA	NA	NA	NA
WP_031600553.1|430932_431232_-	hypothetical protein	NA	M4ZR44	Bacillus_phage	79.2	2.0e-39
WP_031600552.1|431247_432369_-|plate	phage baseplate upper protein	plate	M4ZRP1	Bacillus_phage	92.5	9.8e-196
WP_033881098.1|433993_435868_-	autolysin	NA	D6R400	Bacillus_phage	27.8	5.5e-50
WP_014479880.1|435881_436715_-|tail	phage tail family protein	tail	M4ZS20	Bacillus_phage	34.1	3.5e-33
WP_014479879.1|436727_440468_-	transglycosylase SLT domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	60.4	9.1e-105
WP_014479878.1|440530_440713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479877.1|440724_441087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479876.1|441146_441731_-	hypothetical protein	NA	U5U3Z7	Lactobacillus_phage	36.5	9.1e-28
WP_014479875.1|441736_442144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031600548.1|442140_442533_-	hypothetical protein	NA	A0A0M5M1E5	Enterococcus_phage	37.9	3.0e-11
WP_014479873.1|442532_442859_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_014479872.1|442848_443142_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JB77	uncultured_Caudovirales_phage	33.0	2.6e-07
WP_014479871.1|443196_443580_-	collagen-like protein	NA	D6R3Z0	Bacillus_phage	56.8	1.4e-05
WP_014479870.1|443607_444816_-|capsid	phage major capsid protein	capsid	A0A2H4J824	uncultured_Caudovirales_phage	49.8	4.9e-76
WP_014479869.1|444863_445460_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1J0MFL1	Staphylococcus_phage	53.8	3.3e-49
WP_014479868.1|445452_446679_-|portal	phage portal protein	portal	A0A1J0MFU3	Staphylococcus_phage	39.4	2.4e-70
WP_014479867.1|446683_446890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479866.1|446906_448640_-|terminase	terminase large subunit	terminase	A0A2H4JCI4	uncultured_Caudovirales_phage	48.9	2.1e-144
WP_014479865.1|448629_449115_-|terminase	phage terminase small subunit P27 family	terminase	A0A1Q1PVW3	Staphylococcus_phage	36.0	4.2e-18
WP_033881107.1|449353_449560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881110.1|449562_449946_-	hypothetical protein	NA	A0A075M5R4	Enterococcus_phage	43.3	1.2e-17
WP_046159992.1|450317_450731_-	ArpU family transcriptional regulator	NA	D6R428	Bacillus_phage	97.0	2.1e-63
WP_014479862.1|450984_451500_-	hypothetical protein	NA	D6R425	Bacillus_phage	93.0	8.7e-91
WP_014479861.1|451534_452074_-	hypothetical protein	NA	Q9ZXC2	Bacillus_phage	96.1	1.8e-94
WP_014479860.1|452070_452508_-	hypothetical protein	NA	Q9ZXC3	Bacillus_phage	91.7	4.8e-74
WP_014479859.1|452707_455125_-	hypothetical protein	NA	D6R422	Bacillus_phage	88.7	0.0e+00
WP_014479858.1|455185_455623_-	DUF669 domain-containing protein	NA	Q9ZXC5	Bacillus_phage	97.2	1.3e-79
WP_014479857.1|455643_455958_-	hypothetical protein	NA	Q9ZXC6	Bacillus_phage	99.0	1.5e-53
WP_014479856.1|455947_456883_-	AAA family ATPase	NA	Q9ZXC7	Bacillus_phage	96.5	2.0e-170
WP_014479855.1|456886_457441_-	hypothetical protein	NA	Q9ZXC8	Bacillus_phage	96.2	3.1e-94
WP_014479853.1|457636_457912_-	hypothetical protein	NA	Q9ZXC9	Bacillus_phage	47.1	1.2e-19
WP_105778750.1|457908_458100_-	hypothetical protein	NA	Q9ZXD0	Bacillus_phage	53.1	7.1e-06
WP_014479851.1|458160_458472_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014479850.1|458487_459252_-	hypothetical protein	NA	A8ATN0	Listeria_phage	49.1	1.0e-47
WP_033881118.1|459366_459585_-	helix-turn-helix transcriptional regulator	NA	A0A0K2CZL1	Paenibacillus_phage	63.2	2.1e-17
WP_014479849.1|459709_460096_+	helix-turn-helix transcriptional regulator	NA	R9W020	Paenibacillus_phage	31.4	9.0e-08
WP_105778744.1|460079_461135_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	24.2	1.7e-08
WP_088272329.1|461150_462308_+|integrase	site-specific integrase	integrase	A0A0M5M609	Bacillus_phage	38.9	8.3e-65
463697:463712	attR	TACTTCACGTTTTCTT	NA	NA	NA	NA
>prophage 4
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	467008	473580	4121999		Bacillus_phage(50.0%)	6	NA	NA
WP_003231746.1|467008_467977_-	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.5	5.2e-52
WP_014479843.1|468617_469385_+	sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	49.5	1.2e-51
WP_003245105.1|469448_470069_-	hypothetical protein	NA	A0A127AYS1	Bacillus_phage	48.4	1.6e-46
WP_003231754.1|470118_471108_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.5	1.9e-155
WP_014479842.1|471125_473228_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	86.8	0.0e+00
WP_003231758.1|473187_473580_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	58.3	2.5e-29
>prophage 5
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	912640	958567	4121999	transposase,protease,holin,plate,portal,terminase	uncultured_Caudovirales_phage(30.56%)	55	NA	NA
WP_033881739.1|912640_913990_+|protease	serine protease HtrA	protease	A0A1B1IT49	uncultured_Mediterranean_phage	34.1	3.4e-25
WP_014479573.1|914489_915461_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	41.3	2.5e-62
WP_014479572.1|915472_917623_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_014479571.1|917839_918790_-	ring-cleaving dioxygenase	NA	NA	NA	NA	NA
WP_014479570.1|919178_920495_+	serine/threonine exchanger	NA	NA	NA	NA	NA
WP_003218470.1|920770_921388_+	DUF47 domain-containing protein	NA	NA	NA	NA	NA
WP_014479569.1|921400_922402_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_003244695.1|922511_923258_+	toxin-antitoxin-antitoxin system toxin SpoIISA	NA	NA	NA	NA	NA
WP_003232646.1|923257_923428_+	type II toxin-antitoxin system SpoIISB family antitoxin	NA	NA	NA	NA	NA
WP_003232648.1|923513_923651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479567.1|923688_924582_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	69.2	5.2e-83
WP_014479566.1|924594_924858_-|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	64.4	6.1e-24
WP_014479565.1|924870_925140_-	phage-like element PBSX protein XhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	64.8	1.4e-23
WP_014479564.1|925192_926032_-	phage-like element PBSX protein XepA	NA	NA	NA	NA	NA
WP_014479563.1|926078_926243_-	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	67.9	1.9e-15
WP_014479562.1|926239_926569_-	hypothetical protein	NA	A0A2H4JCI0	uncultured_Caudovirales_phage	40.7	1.3e-15
WP_014479561.1|926580_928644_-	hypothetical protein	NA	A0A2H4J4R1	uncultured_Caudovirales_phage	34.5	2.6e-29
WP_003232665.1|928646_928919_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014476551.1|928915_929494_-	YmfQ family protein	NA	A0A2H4J717	uncultured_Caudovirales_phage	34.2	3.9e-15
WP_003232669.1|929477_930524_-|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	44.3	1.3e-72
WP_014479560.1|930516_930942_-	DUF2634 domain-containing protein	NA	A0A2H4J6K5	uncultured_Caudovirales_phage	38.0	3.0e-12
WP_003244812.1|930999_931266_-	DUF2577 domain-containing protein	NA	S6C459	Thermus_phage	36.4	1.7e-05
WP_003245730.1|931265_932243_-	phage-like element PBSX protein XkdQ	NA	H7BV96	unidentified_phage	32.6	1.0e-39
WP_014479559.1|932258_932918_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A8WJR4	Clostridium_phage	33.2	1.1e-24
WP_031600410.1|932910_937914_-	transglycosylase SLT domain-containing protein	NA	A0A2H4JA91	uncultured_Caudovirales_phage	44.8	6.4e-37
WP_014479557.1|937914_938055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479556.1|938096_938543_-	hypothetical protein	NA	A0A0A7RTY8	Clostridium_phage	36.8	1.0e-10
WP_014479555.1|938634_939078_-	phage-like element PBSX protein XkdM	NA	A0A0K2CNG3	Brevibacillus_phage	44.5	1.9e-25
WP_014479554.1|939079_940480_-	hypothetical protein	NA	A0A0A7S087	Clostridium_phage	39.3	3.0e-77
WP_003232679.1|940476_940695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479553.1|940698_941139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003245226.1|941151_941637_-	HK97 gp10 family phage protein	NA	A0A249XXA4	Clostridium_phage	47.0	2.1e-38
WP_009967053.1|941633_941990_-	DUF3599 family protein	NA	NA	NA	NA	NA
WP_014479552.1|941986_942370_-	DUF3199 family protein	NA	A0A1B1P7D6	Bacillus_phage	40.5	1.4e-13
WP_003232690.1|942391_943327_-	phage-like element PBSX protein XkdG	NA	A0A1B1P7E3	Bacillus_phage	63.8	1.1e-104
WP_014479551.1|943352_944180_-	hypothetical protein	NA	A0A1B1P7E4	Bacillus_phage	59.2	1.6e-54
WP_003232695.1|944199_945687_-|portal	phage portal protein	portal	A0A1B1P7C8	Bacillus_phage	55.7	1.7e-139
WP_003232697.1|945690_946992_-|terminase	PBSX family phage terminase large subunit	terminase	A0A2P1JTW5	Anoxybacillus_phage	60.0	9.1e-153
WP_003244697.1|946988_947786_-|terminase	PBSX phage terminase small subunit	terminase	A0A0S2MVB6	Bacillus_phage	50.2	8.0e-59
WP_014479550.1|947901_948411_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1L2JY33	Aeribacillus_phage	39.2	6.5e-22
WP_014476537.1|948526_948733_-	phage-like element PBSX protein XtrA	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	50.0	2.1e-11
WP_014479549.1|948729_949080_-	phage-like element PBSX protein XkdD	NA	NA	NA	NA	NA
WP_003245588.1|949164_949332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072592528.1|949331_950132_-	ATP-binding protein	NA	A6XMI1	Bacillus_virus	51.7	1.1e-60
WP_003232710.1|950031_950868_-	hypothetical protein	NA	S6BFM4	Thermus_phage	27.8	6.7e-24
WP_003232712.1|950854_951034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003232719.1|951212_951554_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	1.3e-18
WP_003232721.1|951716_952313_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	8.1e-40
WP_003245071.1|952356_953193_-	manganese catalase	NA	NA	NA	NA	NA
WP_014479547.1|953269_953872_-	poly-gamma-glutamate hydrolase family protein	NA	F8WQ53	Bacillus_phage	48.7	1.4e-44
WP_014479546.1|953976_954354_+	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	42.3	7.9e-17
WP_014479545.1|954393_955347_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A218KC88	Bacillus_phage	73.8	1.6e-66
WP_003245487.1|955744_955879_-	phosphatase RapA inhibitor PhrA	NA	NA	NA	NA	NA
WP_015252291.1|955868_957005_-	response regulator aspartate phosphatase RapA	NA	A0A1P8CWN8	Bacillus_phage	47.4	4.9e-94
WP_087614160.1|957417_958567_+|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	61.2	1.7e-38
>prophage 6
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	995867	1044038	4121999	coat,transposase,tRNA	Bacillus_phage(55.56%)	52	NA	NA
WP_014479511.1|995867_996347_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_009967031.1|996575_996971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479509.1|997189_997696_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_031600391.1|997826_999038_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	26.8	2.2e-23
WP_072592525.1|999110_999602_-	YjdF family protein	NA	NA	NA	NA	NA
WP_014479507.1|999771_1000719_-	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA	NA
WP_014479506.1|1000733_1002686_-	PTS mannose transporter subunit IIABC	NA	NA	NA	NA	NA
WP_014479505.1|1002834_1004781_-	mannose transport/utilization transcriptional regulator ManR	NA	NA	NA	NA	NA
WP_033881593.1|1005088_1005406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031600388.1|1005520_1005838_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003232842.1|1006270_1006462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881592.1|1006964_1007165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014476481.1|1007293_1007809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_131121726.1|1008049_1008274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479501.1|1008483_1009077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041516382.1|1009932_1010325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041516380.1|1010339_1010651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881587.1|1010788_1011028_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_033881589.1|1011402_1011690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881586.1|1011847_1012153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031600262.1|1012196_1013444_-|transposase	IS256-like element ISBsu2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.6e-24
WP_014479498.1|1013576_1014035_-	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_031600385.1|1014037_1015813_-	ribonuclease YeeF family protein	NA	A0A1P8CWI7	Bacillus_phage	57.3	5.8e-126
WP_014479496.1|1016160_1017276_+	tetratricopeptide repeat protein	NA	D6R410	Bacillus_phage	71.9	2.4e-146
WP_014479494.1|1017633_1017861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049832638.1|1017949_1018216_-	YgiT-type zinc finger protein	NA	NA	NA	NA	NA
WP_014479492.1|1018256_1018844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479487.1|1021210_1021426_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031600382.1|1021491_1023009_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_014479483.1|1024705_1025875_-	hypothetical protein	NA	M4ZSB3	Bacillus_phage	41.8	2.0e-87
WP_106610850.1|1026814_1027090_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014479481.1|1027255_1027627_+	helix-turn-helix domain-containing protein	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	46.8	5.1e-16
WP_014479480.1|1027989_1028511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010329852.1|1028523_1028871_+	DUF4064 domain-containing protein	NA	A0A0S2MVJ2	Bacillus_phage	67.6	8.6e-18
WP_014479476.1|1030908_1032099_+	DUF819 domain-containing protein	NA	NA	NA	NA	NA
WP_014479475.1|1032168_1032714_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014479474.1|1032746_1033919_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_003232857.1|1033911_1035033_-	cystathionine gamma-synthase/O-acetylhomoserine thiolyase	NA	A0A0B5JD48	Pandoravirus	26.3	3.7e-17
WP_003245358.1|1035388_1036111_+	esterase family protein	NA	NA	NA	NA	NA
WP_003232861.1|1036147_1036663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479473.1|1036666_1037089_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003232866.1|1037161_1037416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479472.1|1037532_1039812_+	ATP-dependent helicase	NA	A0A068EQC7	Bacillus_phage	34.9	3.5e-91
WP_014479471.1|1039885_1040140_-	sporulation-specific transcription regulator SopVIF	NA	NA	NA	NA	NA
WP_003232872.1|1040272_1040422_-	sporulation protein YjcZ	NA	NA	NA	NA	NA
WP_014479470.1|1040503_1040710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014476457.1|1040991_1041348_-	sporulation protein YjcA	NA	NA	NA	NA	NA
WP_014479468.1|1041507_1041894_+|coat	spore coat protein V	coat	NA	NA	NA	NA
WP_014479467.1|1041933_1042254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014479466.1|1042338_1042821_+|coat	spore coat protein X	coat	NA	NA	NA	NA
WP_014479465.1|1042972_1043461_+|coat	spore coat protein CotY	coat	NA	NA	NA	NA
WP_014479464.1|1043588_1044038_+|coat	spore coat protein CotZ	coat	NA	NA	NA	NA
>prophage 7
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	1479914	1541704	4121999	coat,transposase	uncultured_Caudovirales_phage(22.22%)	51	NA	NA
WP_087614160.1|1479914_1481065_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	61.2	1.7e-38
WP_014479144.1|1481602_1482793_-	MFS transporter	NA	NA	NA	NA	NA
WP_014479143.1|1482858_1483281_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014476106.1|1483405_1483852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479142.1|1483974_1485864_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1V0SGN0	Hokovirus	31.9	6.1e-41
WP_003233767.1|1485998_1486859_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.0	2.2e-09
WP_014479141.1|1486872_1488330_-	benzaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003233771.1|1488579_1489965_+	amino acid permease	NA	NA	NA	NA	NA
WP_014479140.1|1490056_1490764_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA	NA
WP_014479139.1|1490875_1492105_+	MFS transporter	NA	NA	NA	NA	NA
WP_015252589.1|1492134_1493070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003233779.1|1493070_1494249_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_014479137.1|1494277_1495189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003244102.1|1495212_1496181_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L0I7	Tupanvirus	29.3	1.1e-30
WP_014479136.1|1496187_1496952_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_033881176.1|1497188_1499108_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	43.5	1.0e-128
WP_014479134.1|1499554_1502740_-	cytochrome P450	NA	V5UQK0	Mycobacterium_phage	37.5	3.0e-80
WP_014479133.1|1502884_1503958_+	DUF3900 domain-containing protein	NA	NA	NA	NA	NA
WP_031600262.1|1504067_1505315_-|transposase	IS256-like element ISBsu2 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	22.6	2.6e-24
WP_041516347.1|1505401_1506874_-	hypothetical protein	NA	A0A2H4JCX8	uncultured_Caudovirales_phage	34.0	3.2e-05
WP_014479130.1|1507053_1507266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014479129.1|1507459_1508104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003244522.1|1508213_1508381_-	YezD family protein	NA	NA	NA	NA	NA
WP_014479128.1|1508535_1509408_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_031600257.1|1509605_1510172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003233803.1|1510263_1510626_+	VOC family protein	NA	NA	NA	NA	NA
WP_014479126.1|1510729_1511056_+	heme-degrading oxygenase HmoA	NA	NA	NA	NA	NA
WP_014479125.1|1511092_1511788_-	DUF421 domain-containing protein	NA	NA	NA	NA	NA
WP_014479124.1|1511862_1513206_-	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA	NA
WP_014479123.1|1513214_1514102_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_014479122.1|1514115_1515072_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_014479121.1|1515126_1516635_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003233813.1|1521331_1521985_-	rhamnogalacturonan acetylesterase	NA	NA	NA	NA	NA
WP_049832635.1|1522143_1523982_-	rhamnogalacturonan lyase	NA	NA	NA	NA	NA
WP_072592510.1|1524027_1525890_-	rhamnogalacturonan lyase	NA	NA	NA	NA	NA
WP_033882027.1|1526010_1526637_-	YesL family protein	NA	NA	NA	NA	NA
WP_014479110.1|1526633_1527296_-	YesU family protein	NA	NA	NA	NA	NA
WP_031600252.1|1527288_1527987_-	rhamnogalacturonan acetylesterase	NA	NA	NA	NA	NA
WP_014479108.1|1528000_1530286_-	transcriptional regulator YesS	NA	NA	NA	NA	NA
WP_014479107.1|1530308_1531343_-	rhamnogalacturonyl hydrolase YesR	NA	NA	NA	NA	NA
WP_014479106.1|1531358_1532249_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_014479105.1|1532252_1533182_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_014479104.1|1533178_1534462_-	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014479101.1|1535665_1537399_-	two-component system sensor histidine kinase YesM	NA	Q9EYF3	Enterobacteria_phage	27.5	6.9e-23
WP_031600250.1|1537395_1538025_-	YesL family protein	NA	NA	NA	NA	NA
WP_014479097.1|1538464_1539007_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014479096.1|1539131_1539701_-|coat	spore coat protein CotJC	coat	NA	NA	NA	NA
WP_014479095.1|1539715_1539979_-|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
WP_014479094.1|1539962_1540211_-|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
WP_014479093.1|1540387_1540972_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_049832634.1|1541086_1541704_-|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 8
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	1585436	1593802	4121999		Synechococcus_phage(50.0%)	8	NA	NA
WP_014479062.1|1585436_1586024_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	41.0	2.4e-28
WP_014479061.1|1586020_1587061_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.0	1.7e-64
WP_003233947.1|1587162_1588593_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	1.2e-52
WP_003233949.1|1588568_1590797_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.1	3.8e-159
WP_003243954.1|1590780_1591464_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003219409.1|1591460_1591715_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014479060.1|1591707_1592433_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	44.1	1.2e-45
WP_003233955.1|1592506_1593802_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.7	5.9e-19
>prophage 9
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	2345160	2442903	4121999	coat,protease,transposase,holin	Bacillus_phage(23.81%)	89	NA	NA
WP_014481472.1|2345160_2346363_+|protease	serine protease HtrC	protease	W5SAB9	Pithovirus	40.4	5.9e-13
WP_003244510.1|2346677_2348063_-	arginine utilization regulatory protein RocR	NA	NA	NA	NA	NA
WP_015715052.1|2348289_2348574_+	winged helix-turn-helix transcriptional regulator	NA	A0A218MNF3	uncultured_virus	41.3	2.8e-06
WP_014481470.1|2348573_2349209_+	SdpI family protein	NA	NA	NA	NA	NA
WP_015715050.1|2349392_2349947_+	SdpA family antimicrobial peptide system protein	NA	NA	NA	NA	NA
WP_014481469.1|2349931_2350885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015715048.1|2350946_2351549_+	sporulation delaying protein family toxin	NA	NA	NA	NA	NA
WP_033882007.1|2351880_2353086_+	ornithine aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	28.5	2.0e-29
WP_014481465.1|2353308_2354712_+	amino acid permease	NA	NA	NA	NA	NA
WP_003226959.1|2354784_2355675_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	29.1	2.0e-26
WP_003226961.1|2355911_2356028_-	Phr family secreted Rap phosphatase inhibitor	NA	NA	NA	NA	NA
WP_014481464.1|2356028_2357126_-	response regulator aspartate phosphatase RapG	NA	D6R410	Bacillus_phage	39.3	6.0e-73
WP_014481463.1|2357236_2357707_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014481462.1|2357848_2358586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481461.1|2358596_2359754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481460.1|2359769_2360018_+	DUF2651 domain-containing protein	NA	NA	NA	NA	NA
WP_014481459.1|2360122_2360293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481458.1|2360355_2361582_+	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	29.3	1.1e-11
WP_014481457.1|2361615_2362029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014481456.1|2362213_2362384_+	CxxH/CxxC protein	NA	NA	NA	NA	NA
WP_003226975.1|2362464_2362944_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_014481455.1|2363231_2364140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031601181.1|2364096_2367219_+	DEAD/DEAH box helicase	NA	A7WKM3	Acidianus_filamentous_virus	26.4	6.6e-08
WP_014479904.1|2367483_2367801_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_033881055.1|2367797_2368712_+|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	22.9	4.0e-06
WP_033881129.1|2369095_2369359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017696296.1|2370057_2370336_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	100.0	7.3e-44
WP_080283097.1|2370320_2370767_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	97.5	3.2e-57
WP_033881055.1|2370847_2371762_-|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	22.9	4.0e-06
WP_014479904.1|2371758_2372076_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_031601176.1|2373133_2375167_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_121591334.1|2375144_2377031_+	ATP-dependent helicase	NA	S5MMD7	Bacillus_phage	21.8	6.6e-19
WP_031601173.1|2377265_2378729_-	hypothetical protein	NA	A0A0S2MYH0	Enterococcus_phage	36.0	1.0e-11
WP_033881507.1|2379140_2379527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480339.1|2379656_2381204_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_014479891.1|2381200_2381959_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	38.6	5.8e-43
WP_014481451.1|2382378_2382819_-	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	34.4	3.4e-11
WP_080283096.1|2383299_2383650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481449.1|2384100_2386026_-	fructose-bisphosphatase class III	NA	NA	NA	NA	NA
WP_014481448.1|2386506_2387136_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_014478516.1|2387156_2387879_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
WP_014481447.1|2387969_2388680_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014481445.1|2389246_2390686_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_003243077.1|2390796_2392326_-	alkyl hydroperoxide reductase subunit F	NA	A0A1V0SIN1	Klosneuvirus	29.3	1.0e-33
WP_003243686.1|2392339_2392903_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_014478511.1|2393368_2394775_-	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	NA	E3SJC4	Synechococcus_phage	30.6	1.7e-32
WP_003243139.1|2394797_2396144_-	gluconate permease GntP	NA	NA	NA	NA	NA
WP_014481444.1|2396172_2397714_-	gluconokinase	NA	NA	NA	NA	NA
WP_003243132.1|2397706_2398438_-	gluconate operon transcriptional repressor GntR	NA	NA	NA	NA	NA
WP_014481443.1|2398633_2399782_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.3	1.4e-48
WP_014481442.1|2399874_2400906_+	general stress protein 30	NA	NA	NA	NA	NA
WP_003227015.1|2400945_2401638_-	LrgB family protein	NA	NA	NA	NA	NA
WP_009968420.1|2401607_2402012_-|holin	CidA/LrgA family holin-like protein	holin	NA	NA	NA	NA
WP_003243994.1|2402238_2402670_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014481441.1|2402728_2403799_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014481440.1|2403929_2404505_+	transcriptional regulator YxaF	NA	NA	NA	NA	NA
WP_014481439.1|2404598_2405633_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_014481437.1|2406041_2407511_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_014481436.1|2407511_2409695_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	30.8	1.7e-50
WP_014481435.1|2409858_2410113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014478926.1|2410390_2411515_-|transposase	IS4-like element IS4Bsu1 family transposase	transposase	NA	NA	NA	NA
WP_014481434.1|2411836_2412058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481433.1|2412102_2412321_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881094.1|2412943_2413144_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014481429.1|2414335_2414587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481428.1|2414754_2416635_+	molecular chaperone HtpG	NA	A0A1V0SAD6	Catovirus	33.4	1.1e-93
WP_014481425.1|2418180_2418693_-	HPP family protein	NA	NA	NA	NA	NA
WP_014481422.1|2419449_2419920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481421.1|2420023_2420338_-	hypothetical protein	NA	L7TIP7	Escherichia_phage	47.0	1.6e-10
WP_014481420.1|2420567_2421500_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003227050.1|2421553_2422309_-	myo-inositol utilization transcriptional regulator IolR	NA	NA	NA	NA	NA
WP_031601042.1|2422602_2423727_+|transposase	IS4-like element IS4Bsu1 family transposase	transposase	NA	NA	NA	NA
WP_014481419.1|2424140_2425604_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_014481418.1|2425678_2426494_+	5-deoxy-glucuronate isomerase	NA	NA	NA	NA	NA
WP_014478485.1|2426517_2427495_+	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA	NA
WP_014481417.1|2427527_2429441_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA	NA
WP_014481416.1|2429457_2430351_+	myo-inosose-2 dehydratase	NA	NA	NA	NA	NA
WP_014481415.1|2430365_2431682_+	myo-inositol transporter IolF	NA	NA	NA	NA	NA
WP_014481414.1|2431704_2432739_+	bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase	NA	NA	NA	NA	NA
WP_014481413.1|2432758_2433628_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
WP_014481412.1|2433713_2434550_+	2-keto-myo-inositol isomerase	NA	NA	NA	NA	NA
WP_014481411.1|2434570_2435443_+	6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase	NA	NA	NA	NA	NA
WP_003243527.1|2435550_2436240_+	two-component system response regulator YxdJ	NA	NA	NA	NA	NA
WP_014481410.1|2436236_2437214_+	two-component system sensor histidine kinase YxdJ	NA	NA	NA	NA	NA
WP_003227084.1|2439963_2440311_+	YxeA family protein	NA	NA	NA	NA	NA
WP_014481404.1|2440351_2441317_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014481403.1|2441494_2441893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003242469.1|2441936_2442290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003227093.1|2442537_2442903_-|coat	inner spore coat protein CotNE	coat	NA	NA	NA	NA
>prophage 10
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	2567043	2626173	4121999	coat,transposase,protease,holin,tRNA,lysis	Bacillus_phage(28.57%)	55	NA	NA
WP_087614167.1|2567043_2568233_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	36.6	1.6e-31
WP_003244564.1|2568442_2569075_+	GTP pyrophosphokinase YwaC	NA	NA	NA	NA	NA
WP_014481296.1|2569104_2570472_-	aminopeptidase YwaD	NA	NA	NA	NA	NA
WP_014481295.1|2570627_2571869_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003227345.1|2572119_2572635_-	tyrZ transcriptional regulator YwaE	NA	NA	NA	NA	NA
WP_014481294.1|2572785_2573499_+	TIGR02206 family membrane protein	NA	NA	NA	NA	NA
WP_014481293.1|2573609_2574470_+	glycosyltransferase family 8 protein	NA	A0A2P0VP84	Tetraselmis_virus	26.4	1.9e-05
WP_003227349.1|2574522_2575365_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_014481292.1|2575418_2576798_-	SacY negative regulator SacX	NA	NA	NA	NA	NA
WP_014481287.1|2579388_2580711_+	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA	NA
WP_014481286.1|2580802_2581480_+	DUF2711 domain-containing protein	NA	NA	NA	NA	NA
WP_014481285.1|2581518_2581899_-	glyoxalase GlxA	NA	NA	NA	NA	NA
WP_014481284.1|2582019_2583207_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.0	1.2e-74
WP_014481283.1|2583241_2583439_-	YwbE family protein	NA	NA	NA	NA	NA
WP_014481282.1|2583472_2584675_-	MFS transporter	NA	NA	NA	NA	NA
WP_003227371.1|2584779_2585457_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_014481281.1|2585438_2585825_-|holin	CidA/LrgA family holin-like protein	holin	NA	NA	NA	NA
WP_014481280.1|2585930_2586836_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033881846.1|2586843_2587662_+	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
WP_014481278.1|2587658_2588327_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_014481277.1|2588483_2589926_+	ferrous ion permease EfeU	NA	NA	NA	NA	NA
WP_014481276.1|2589922_2591080_+	iron uptake system lipoprotein EfeM	NA	NA	NA	NA	NA
WP_014481275.1|2591098_2592349_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
WP_014481274.1|2592631_2593234_+	DsbA family protein	NA	NA	NA	NA	NA
WP_014481273.1|2593263_2594805_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_014481272.1|2594801_2595110_-	DUF485 domain-containing protein	NA	NA	NA	NA	NA
WP_003243648.1|2595552_2595711_-	transcriptional regulator SlrA	NA	NA	NA	NA	NA
WP_003227398.1|2596753_2597137_+	GtrA family protein	NA	NA	NA	NA	NA
WP_014481270.1|2597214_2598387_+	galactokinase	NA	NA	NA	NA	NA
WP_014481269.1|2598390_2599932_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_009968363.1|2600002_2600248_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010886637.1|2600763_2601729_+	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003227407.1|2601756_2603706_+	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003227409.1|2603719_2604334_+	Quinol oxidase subunit 3	NA	NA	NA	NA	NA
WP_003227410.1|2604335_2604710_+	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003227411.1|2604751_2605015_-	spore morphogenesis/germination protein YwcE	NA	NA	NA	NA	NA
WP_014481268.1|2605243_2606389_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014481267.1|2606597_2607779_+	cell shape-determining peptidoglycan glycosyltransferase RodA	NA	NA	NA	NA	NA
WP_014478349.1|2607884_2608634_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
WP_014481266.1|2608807_2609809_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014481265.1|2609846_2612267_-|protease	serine protease Vpr	protease	A0A217EQY2	Bacillus_phage	38.2	5.3e-21
WP_015250947.1|2612796_2613099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481261.1|2614008_2614779_-	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
WP_014481260.1|2615080_2616466_+	PTS system sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_014481259.1|2616462_2617902_+	sucrose-6-phosphate hydrolase	NA	F8WPR5	Bacillus_phage	26.8	3.7e-22
WP_003243437.1|2617995_2618244_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481258.1|2618334_2619150_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_014481257.1|2619341_2620148_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003242965.1|2620161_2620839_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	46.1	8.3e-49
WP_014481256.1|2620863_2622234_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_014481255.1|2622401_2622719_+	YwdI family protein	NA	NA	NA	NA	NA
WP_014481254.1|2622738_2624061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003227446.1|2624122_2624494_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_014481253.1|2624537_2625083_-|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
WP_014481251.1|2625402_2626173_+|coat	spore coat dTDP-glycosyltransferase SpsA	coat	A0A0F7L2F7	uncultured_marine_virus	28.6	4.4e-06
>prophage 11
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	2629661	2685185	4121999	bacteriocin,coat,protease,tRNA	Enterobacteria_phage(20.0%)	56	NA	NA
WP_031601100.1|2629661_2630783_+|coat	spore coat biosynthesis protein SpsE	coat	NA	NA	NA	NA
WP_014481245.1|2630775_2631498_+|coat	spore coat polysaccharide biosynthesis protein SpsF	coat	NA	NA	NA	NA
WP_014481244.1|2631500_2632520_+|coat	spore coat polysaccharide biosynthesis protein SpsG	coat	NA	NA	NA	NA
WP_014478328.1|2632544_2633285_+	NTP transferase domain-containing protein	NA	I7I009	Enterobacteria_phage	41.9	4.5e-48
WP_003244201.1|2633284_2634232_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	43.8	4.4e-72
WP_014481243.1|2634245_2635097_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	38.9	1.3e-38
WP_014481242.1|2635089_2635545_+|coat	spore coat polysaccharide biosynthesis protein SpsL	coat	NA	NA	NA	NA
WP_014481241.1|2635868_2636333_+	biofilm-surface layer protein BslB	NA	NA	NA	NA	NA
WP_003227482.1|2636510_2637785_+	glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_014478322.1|2638011_2639559_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_014481239.1|2639632_2641333_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_015250969.1|2641332_2642745_+	amino acid permease	NA	NA	NA	NA	NA
WP_014481237.1|2642954_2644193_+	MFS transporter	NA	NA	NA	NA	NA
WP_009968341.1|2644344_2644959_+	prephenate decarboxylase	NA	NA	NA	NA	NA
WP_003244300.1|2644948_2645656_+	3-((4R)-4-hydroxycyclohexa-1, 5-dien-1-yl)-2-oxopropanoate isomerase	NA	NA	NA	NA	NA
WP_003243359.1|2645658_2646420_+	dihydroanticapsin 7-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.9	2.8e-21
WP_003242921.1|2646438_2647857_+	alanine--anticapsin ligase	NA	NA	NA	NA	NA
WP_014481236.1|2647853_2649038_+	bacilysin exporter BacE	NA	NA	NA	NA	NA
WP_031601099.1|2649038_2650253_+	transaminase BacF	NA	NA	NA	NA	NA
WP_014481234.1|2650268_2651048_-	NADPH-dependent reductase BacG	NA	NA	NA	NA	NA
WP_003227507.1|2651180_2651945_-	heme-dependent peroxidase	NA	NA	NA	NA	NA
WP_003235941.1|2652214_2653186_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_014481233.1|2653331_2654231_+	cysJI operon transcriptional regulator CysL	NA	A0A2H4J8I9	uncultured_Caudovirales_phage	42.5	3.6e-07
WP_014481232.1|2654279_2655125_+	octanoyl-[GcvH]:protein N-octanoyltransferase	NA	NA	NA	NA	NA
WP_033881831.1|2655293_2656184_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003227516.1|2656327_2657104_-	prespore-specific transcription regulator RsfA	NA	A0A1D6X8E5	Bacillus_phage	50.0	7.6e-06
WP_003222050.1|2657318_2657543_+	DUF1450 domain-containing protein	NA	NA	NA	NA	NA
WP_003243873.1|2657704_2659006_+	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	28.9	4.2e-25
WP_003227524.1|2659041_2659542_+	YwgA family protein	NA	NA	NA	NA	NA
WP_003243988.1|2659653_2660124_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_003243441.1|2660123_2661524_+	MFS transporter	NA	NA	NA	NA	NA
WP_014481228.1|2662368_2664285_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	43.4	1.9e-143
WP_003227535.1|2664404_2664824_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003222038.1|2664866_2665055_-	2-hydroxymuconate tautomerase	NA	NA	NA	NA	NA
WP_003243167.1|2665163_2665823_+|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003244446.1|2665836_2666355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014478299.1|2666493_2666928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014481227.1|2666955_2669031_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_003227543.1|2669232_2670063_+	spermidine synthase	NA	NA	NA	NA	NA
WP_003227545.1|2670123_2670996_+	agmatinase	NA	NA	NA	NA	NA
WP_105778741.1|2670930_2671488_-	YbaK/EbsC family protein	NA	NA	NA	NA	NA
WP_009968329.1|2671585_2671705_-	phosphatase RapF inhibitor PhrF	NA	NA	NA	NA	NA
WP_014481226.1|2671688_2672834_-	response regulator aspartate phosphatase RapF	NA	A0A1P8CWN8	Bacillus_phage	43.5	1.7e-78
WP_014481224.1|2673063_2674419_+	YncE family protein	NA	NA	NA	NA	NA
WP_014481223.1|2674457_2675834_+	YncE family protein	NA	NA	NA	NA	NA
WP_014481222.1|2675839_2676541_-|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	bacteriocin	NA	NA	NA	NA
WP_014481221.1|2676537_2677818_-	insulinase family protein	NA	NA	NA	NA	NA
WP_072592616.1|2677822_2678983_-	insulinase family protein	NA	NA	NA	NA	NA
WP_033881822.1|2678972_2680283_-|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbD	bacteriocin	NA	NA	NA	NA
WP_014481218.1|2680275_2680995_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.2	1.6e-18
WP_003222006.1|2680991_2681153_-|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbB	bacteriocin	NA	NA	NA	NA
WP_014481217.1|2681165_2682512_-	subtilosin maturase AlbA	NA	NA	NA	NA	NA
WP_010886632.1|2682536_2682689_-|bacteriocin	bacteriocin-like protein SboX	bacteriocin	NA	NA	NA	NA
WP_003222002.1|2682645_2682777_-|bacteriocin	subtilosin A family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014481216.1|2683089_2683518_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_003227570.1|2683514_2685185_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 12
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	2981039	3017483	4121999	tail,integrase,plate,portal,terminase	Bacillus_phage(34.62%)	48	2980793:2980846	3017622:3017675
2980793:2980846	attL	GGTTTCCGGTACCACGTCTGTCGGGGGTTCGAATCCCTCCGAGCGCGTCCAATA	NA	NA	NA	NA
WP_014480981.1|2981039_2982029_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0U4IBS1	Pseudomonas_phage	28.1	2.7e-08
WP_041516560.1|2982187_2982919_+	helix-turn-helix domain-containing protein	NA	A0A288WFX2	Bacillus_phage	32.7	6.7e-20
WP_033881294.1|2982949_2983132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881293.1|2983191_2983425_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_031601018.1|2984013_2984349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881551.1|2984550_2984766_-	helix-turn-helix transcriptional regulator	NA	A0A1P8CWW6	Bacillus_phage	50.8	1.7e-08
WP_014480746.1|2984886_2986062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041516557.1|2986595_2987138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880970.1|2987499_2987841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017695246.1|2987833_2988034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880968.1|2988665_2988914_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_033880966.1|2988910_2989294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880965.1|2989361_2989733_+	DUF134 domain-containing protein	NA	NA	NA	NA	NA
WP_031601013.1|2990593_2990872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031601012.1|2990868_2991411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880962.1|2992455_2992635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049832644.1|2992887_2993199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031601009.1|2993572_2993782_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880961.1|2993811_2994360_-|integrase	site-specific integrase	integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	51.6	7.0e-38
WP_033880959.1|2994443_2996204_+|terminase	phage terminase large subunit	terminase	A0A142F1L6	Bacillus_phage	44.8	8.3e-133
WP_031601007.1|2996220_2996655_+	hypothetical protein	NA	A0A2H4J6Z8	uncultured_Caudovirales_phage	49.3	1.5e-27
WP_031601006.1|2996659_2998330_+|portal	phage portal protein	portal	A0A2H4J180	uncultured_Caudovirales_phage	55.3	1.5e-155
WP_017695234.1|2998329_2999142_+	type IV secretion protein Rhs	NA	A0A0N9SJR1	Paenibacillus_phage	52.7	8.1e-75
WP_031601005.1|2999247_2999808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031601004.1|2999839_3000748_+	hypothetical protein	NA	A0A0N9S7T7	Paenibacillus_phage	52.5	1.4e-80
WP_033880957.1|3000804_3000996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031601003.1|3001013_3001406_+	hypothetical protein	NA	A0A0N9SGG4	Paenibacillus_phage	39.5	7.5e-18
WP_033880956.1|3001406_3001745_+	hypothetical protein	NA	A0A0N9RTI3	Paenibacillus_phage	47.3	8.1e-21
WP_033880954.1|3001741_3002149_+	hypothetical protein	NA	A0A0N9SJT1	Paenibacillus_phage	55.5	2.1e-31
WP_033880952.1|3002153_3002528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880949.1|3002568_3003138_+	hypothetical protein	NA	A0A0N9SHI3	Paenibacillus_phage	63.0	1.0e-52
WP_033880428.1|3003224_3003581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033880947.1|3003676_3003898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080283095.1|3003902_3006725_+|tail	phage tail tape measure protein	tail	A0A0N9SJR9	Paenibacillus_phage	36.4	6.7e-68
WP_033880944.1|3006728_3008147_+	glycoside hydrolase family 73	NA	A0A2H4JBY6	uncultured_Caudovirales_phage	42.4	1.3e-56
WP_031600997.1|3008161_3009556_+	hypothetical protein	NA	A6M966	Geobacillus_virus	30.3	3.0e-37
WP_031600996.1|3009568_3011146_+	hypothetical protein	NA	M4ZSB3	Bacillus_phage	86.8	3.3e-258
WP_031600995.1|3011182_3012406_+|plate	phage baseplate upper protein	plate	M4ZRP1	Bacillus_phage	74.9	4.1e-163
WP_014480978.1|3012421_3012715_+	hypothetical protein	NA	M4ZR44	Bacillus_phage	80.2	1.6e-41
WP_014480977.1|3012715_3012886_+	XkdX family protein	NA	M4ZS22	Bacillus_phage	68.1	1.1e-10
WP_033881227.1|3012910_3013114_+	hypothetical protein	NA	A0A290GDY2	Caldibacillus_phage	46.5	1.9e-09
WP_033881228.1|3013186_3014134_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	62.7	2.5e-91
WP_014480975.1|3014153_3014411_+	hypothetical protein	NA	A0A0U4JE55	Bacillus_phage	57.6	5.6e-22
WP_014480974.1|3014532_3014835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480973.1|3014876_3015509_-	hypothetical protein	NA	Q0H249	Geobacillus_phage	57.1	7.2e-63
WP_014480972.1|3015495_3016680_-	DNA translocase FtsK	NA	Q0H250	Geobacillus_phage	53.4	1.3e-108
WP_014480971.1|3016692_3016971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033881229.1|3017249_3017483_+	helix-turn-helix domain-containing protein	NA	B3RH35	Bacillus_virus	62.0	4.3e-21
3017622:3017675	attR	GGTTTCCGGTACCACGTCTGTCGGGGGTTCGAATCCCTCCGAGCGCGTCCAATA	NA	NA	NA	NA
>prophage 13
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	3091815	3099550	4121999	holin	Organic_Lake_phycodnavirus(100.0%)	9	NA	NA
WP_014480912.1|3091815_3092958_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	F2Y1V5	Organic_Lake_phycodnavirus	29.6	2.8e-12
WP_003228349.1|3092980_3093634_+|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCB	holin	NA	NA	NA	NA
WP_031600963.1|3093653_3094565_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014478003.1|3094582_3095257_+|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCD	holin	NA	NA	NA	NA
WP_014480910.1|3095288_3095822_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014480909.1|3096105_3097251_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	F2Y2R6	Organic_Lake_phycodnavirus	32.7	6.0e-15
WP_003228370.1|3097267_3097921_+|holin	choline ABC transporter permease OpuBB	holin	NA	NA	NA	NA
WP_014480908.1|3097932_3098853_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014480907.1|3098869_3099550_+|holin	choline ABC transporter permease OpuBD	holin	NA	NA	NA	NA
>prophage 14
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	3111566	3119931	4121999		Bacillus_phage(40.0%)	18	NA	NA
WP_014480897.1|3111566_3111965_-	helix-turn-helix transcriptional regulator	NA	S5M5X8	Brevibacillus_phage	33.7	4.3e-05
WP_014480896.1|3112199_3112403_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_033881244.1|3112454_3112646_+	helix-turn-helix domain-containing protein	NA	A0A1B2APY7	Phage_Wrath	59.0	1.0e-12
WP_033881245.1|3112670_3112889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480895.1|3112881_3113763_+	phage replisome organiser	NA	V9QKF6	Oenococcus_phage	33.1	6.8e-27
WP_014480894.1|3113746_3114574_+	ATP-binding protein	NA	A0A0U3U1U1	Bacillus_phage	35.9	3.7e-35
WP_014480892.1|3114888_3115437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003237439.1|3115544_3115685_+	BH0509 family protein	NA	NA	NA	NA	NA
WP_003220282.1|3115931_3116129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480888.1|3116171_3116534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480887.1|3116530_3116848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480886.1|3116844_3117252_+	hypothetical protein	NA	W8CYU3	Bacillus_phage	45.8	1.3e-25
WP_014480885.1|3117248_3117506_+	hypothetical protein	NA	A0A2H4JA61	uncultured_Caudovirales_phage	41.7	6.6e-07
WP_014480884.1|3117623_3118280_+	hypothetical protein	NA	R9TQ23	Paenibacillus_phage	46.0	9.9e-39
WP_014480883.1|3118279_3118612_+	hypothetical protein	NA	F8WQ59	Bacillus_phage	53.3	8.3e-18
WP_014480882.1|3118608_3119028_+	hypothetical protein	NA	A0A2I6UHP7	Bacillus_phage	61.2	1.6e-42
WP_014480881.1|3119024_3119225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031600945.1|3119478_3119931_+	hypothetical protein	NA	S6AVV9	Thermus_phage	56.6	3.4e-38
>prophage 15
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	3123615	3147637	4121999	tail,head,protease,holin,portal,terminase,capsid	Bacillus_phage(100.0%)	28	NA	NA
WP_046160532.1|3123615_3123990_+	HNH endonuclease	NA	Q38456	Bacillus_phage	82.3	7.5e-60
WP_017697674.1|3124369_3124903_+|terminase	phage terminase small subunit P27 family	terminase	Q9ZXG2	Bacillus_phage	82.5	1.0e-70
WP_031600939.1|3124902_3126612_+|terminase	terminase large subunit	terminase	D6R3Y4	Bacillus_phage	92.3	0.0e+00
WP_033882051.1|3126624_3126840_+	hypothetical protein	NA	Q9ZXF9	Bacillus_phage	80.6	1.3e-24
WP_033882052.1|3126845_3128093_+|portal	phage portal protein	portal	D6R3Y6	Bacillus_phage	86.5	1.3e-217
WP_003220242.1|3128082_3128709_+|head,protease	HK97 family phage prohead protease	head,protease	Q9ZXF7	Bacillus_phage	92.8	1.8e-106
WP_033882054.1|3128745_3129948_+|capsid	phage major capsid protein	capsid	Q9ZXF6	Bacillus_phage	71.5	3.3e-157
WP_031600935.1|3129963_3130278_+	hypothetical protein	NA	Q9ZXF5	Bacillus_phage	68.8	6.8e-30
WP_031600934.1|3130306_3130798_+	collagen-like protein	NA	D6R3Z0	Bacillus_phage	69.1	1.3e-27
WP_031600933.1|3130813_3131161_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q9ZXF3	Bacillus_phage	87.0	2.0e-51
WP_033882056.1|3131093_3131465_+|head	phage head closure protein	head	Q9ZXF2	Bacillus_phage	68.3	3.5e-41
WP_033882058.1|3131457_3131841_+	HK97 gp10 family phage protein	NA	Q9ZXF1	Bacillus_phage	86.6	2.9e-59
WP_031600930.1|3131837_3132218_+	DUF3168 domain-containing protein	NA	Q9ZXF0	Bacillus_phage	66.1	2.6e-39
WP_017696306.1|3132218_3132830_+|tail	major tail protein	tail	Q9ZXE9	Bacillus_phage	89.7	7.9e-99
WP_003220222.1|3132884_3133223_+	hypothetical protein	NA	Q9ZXE8	Bacillus_phage	70.5	3.0e-39
WP_017696308.1|3133225_3133405_+	hypothetical protein	NA	D6R3Z7	Bacillus_phage	68.5	1.6e-12
WP_033882059.1|3133417_3137296_+|tail	phage tail tape measure protein	tail	D6R3Z8	Bacillus_phage	81.0	0.0e+00
WP_031600927.1|3137295_3138135_+|tail	phage tail family protein	tail	D6R3Z9	Bacillus_phage	83.2	8.5e-136
WP_031600926.1|3138146_3139853_+	hypothetical protein	NA	D6R400	Bacillus_phage	81.8	9.4e-267
WP_072592555.1|3139889_3141464_+	hypothetical protein	NA	M4ZSB3	Bacillus_phage	88.7	1.1e-264
WP_031600924.1|3141500_3142724_+	DUF2479 domain-containing protein	NA	M4ZRP1	Bacillus_phage	79.9	6.5e-177
WP_031600923.1|3142739_3143039_+	hypothetical protein	NA	M4ZR44	Bacillus_phage	79.2	1.5e-39
WP_014480879.1|3143035_3143206_+	XkdX family protein	NA	NA	NA	NA	NA
WP_014480878.1|3143259_3143682_+|holin	holin family protein	holin	D6R405	Bacillus_phage	85.7	3.0e-57
WP_014480877.1|3143723_3144665_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	77.1	3.0e-97
WP_105778748.1|3144704_3145307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014480875.1|3145649_3146039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014480874.1|3146053_3147637_-	hypothetical protein	NA	A0A1P8CWI7	Bacillus_phage	59.7	4.2e-75
>prophage 16
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	3293792	3326295	4121999	coat,transposase,tail,protease,integrase	Bacillus_phage(33.33%)	38	3308544:3308558	3320789:3320803
WP_014478926.1|3293792_3294917_-|transposase	IS4-like element IS4Bsu1 family transposase	transposase	NA	NA	NA	NA
WP_073545220.1|3295085_3295814_+	5' nucleotidase NucF	NA	NA	NA	NA	NA
WP_003243814.1|3295840_3296341_-	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	56.0	1.2e-41
WP_014480751.1|3296493_3297513_+|coat	spore coat-associated protein CotNH	coat	NA	NA	NA	NA
WP_003228694.1|3297713_3299015_+	homoserine dehydrogenase	NA	NA	NA	NA	NA
WP_031600869.1|3299014_3300073_+	threonine synthase	NA	NA	NA	NA	NA
WP_003228699.1|3300069_3300999_+	homoserine kinase	NA	NA	NA	NA	NA
WP_014480749.1|3301105_3303079_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_003151955.1|3303121_3303358_-	NifU family protein	NA	Q58MC7	Prochlorococcus_phage	44.3	2.9e-09
WP_014477874.1|3303555_3303882_+	YuzD family protein	NA	NA	NA	NA	NA
WP_003228707.1|3303907_3304975_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003222913.1|3305237_3305474_+	YuzB family protein	NA	NA	NA	NA	NA
WP_003228710.1|3305610_3306825_+	NupC/NupG family nucleoside CNT transporter	NA	B2YG43	Musca_hytrovirus	22.3	1.6e-13
WP_003243745.1|3306947_3307802_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_003244166.1|3307880_3308243_+	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	45.3	1.4e-18
WP_014480748.1|3308413_3309460_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	27.6	9.2e-31
3308544:3308558	attL	GGACGATAATCGATT	NA	NA	NA	NA
WP_031600865.1|3309620_3310346_+	helix-turn-helix domain-containing protein	NA	A0A288WFX2	Bacillus_phage	31.5	3.6e-18
WP_033882127.1|3310677_3311229_+|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	45.8	6.3e-39
WP_017695574.1|3311365_3311602_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_017695572.1|3312200_3312536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017695571.1|3312727_3312943_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_033881308.1|3313063_3314239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041516551.1|3314772_3315315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881461.1|3315352_3315679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881464.1|3315671_3315857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480743.1|3316798_3317032_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014480742.1|3317012_3317945_+	hypothetical protein	NA	A0A0A8WF99	Clostridium_phage	27.9	1.0e-20
WP_014480741.1|3318020_3318239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881469.1|3318369_3318570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480740.1|3318548_3318923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480739.1|3318919_3319270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031600858.1|3319266_3319752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480738.1|3319763_3320390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881466.1|3320446_3320779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480736.1|3320778_3323892_+|tail	phage tail tape measure protein	tail	A6M961	Geobacillus_virus	57.1	2.5e-07
3320789:3320803	attR	AATCGATTATCGTCC	NA	NA	NA	NA
WP_014480735.1|3324025_3324478_+	SHOCT domain-containing protein	NA	NA	NA	NA	NA
WP_014480734.1|3325129_3325648_+	spermidine/spermine N(1)-acetyltransferase	NA	NA	NA	NA	NA
WP_014480733.1|3325671_3326295_+|protease	protease synthase/sporulation negative transcriptional regulator PaiB	protease	NA	NA	NA	NA
>prophage 17
NZ_CP017763	Bacillus subtilis strain 29R7-12 chromosome, complete genome	4121999	3690805	3763126	4121999	coat,transposase,protease,tRNA,integrase	Staphylococcus_phage(20.0%)	60	3720481:3720535	3731881:3731935
WP_014480507.1|3690805_3693220_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_014480506.1|3693413_3694352_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_003229534.1|3694485_3694743_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_014480505.1|3694749_3695283_+	CvpA family protein	NA	NA	NA	NA	NA
WP_014480504.1|3695356_3697069_+	DNA polymerase/3'-5' exonuclease PolX	NA	E3T5M9	Cafeteria_roenbergensis_virus	24.8	1.4e-12
WP_014480503.1|3697089_3699447_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	43.4	2.9e-16
WP_003237674.1|3699461_3699866_+	DUF350 domain-containing protein	NA	NA	NA	NA	NA
WP_014480502.1|3700054_3701737_+	long-chain-fatty-acid--CoA ligase LcfA	NA	A0A2H4PQM9	Staphylococcus_phage	26.7	6.0e-32
WP_014477593.1|3701842_3702427_+	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA	NA
WP_014480501.1|3702441_3703218_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_014480500.1|3703232_3704006_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_014480499.1|3704041_3705019_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_033881448.1|3705236_3706724_+	alpha-N-arabinofuranosidase	NA	NA	NA	NA	NA
WP_003222500.1|3707017_3707332_+	thioredoxin	NA	A0A1V0SD63	Indivirus	43.0	3.5e-10
WP_014480497.1|3707467_3709240_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_014480495.1|3709609_3710836_+	aspartate kinase	NA	NA	NA	NA	NA
WP_003222508.1|3710879_3711326_-	YslB family protein	NA	NA	NA	NA	NA
WP_003222512.1|3711618_3712227_+	succinate dehydrogenase cytochrome B558	NA	NA	NA	NA	NA
WP_003229567.1|3712260_3714021_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_003229569.1|3714023_3714785_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_014480494.1|3714845_3715289_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003184172.1|3715404_3715629_+	spore germination protein GerE	NA	A0A290GJH9	Caldibacillus_phage	78.7	1.2e-15
WP_003229573.1|3715873_3716314_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010886589.1|3716321_3717140_+	glutamate racemase	NA	NA	NA	NA	NA
WP_003229578.1|3717254_3718355_+	spore germination protein GerM	NA	NA	NA	NA	NA
WP_014480493.1|3718465_3719203_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_015251523.1|3719215_3719812_+	XTP/dITP diphosphatase	NA	A0A2H4UUV7	Bodo_saltans_virus	33.5	5.5e-12
WP_003229585.1|3719827_3720337_+	metallophosphoesterase	NA	NA	NA	NA	NA
3720481:3720535	attL	AGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGAGTTCGAATCTCTCCT	NA	NA	NA	NA
WP_105778747.1|3720805_3721693_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_014480491.1|3721846_3722023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033881452.1|3722030_3722327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480490.1|3723115_3724168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480489.1|3724472_3727679_+	type I restriction-modification system endonuclease	NA	Q5YA94	Bacillus_phage	29.5	1.7e-06
WP_014480488.1|3727811_3729242_+	type I restriction-modification system subunit M	NA	A0A220A2U4	Liberibacter_phage	25.9	2.6e-28
WP_014480487.1|3729238_3730558_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.9	1.3e-16
WP_087614160.1|3732061_3733212_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	61.2	1.7e-38
3731881:3731935	attR	AGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGAGTTCGAATCTCTCCT	NA	NA	NA	NA
WP_014480481.1|3733346_3734171_-	YsnF/AvaK domain-containing protein	NA	NA	NA	NA	NA
WP_038827685.1|3734972_3735308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014480476.1|3736120_3737845_+	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.2	2.4e-60
WP_004399096.1|3737841_3738360_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003222549.1|3738383_3739412_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_033881607.1|3739398_3740955_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	39.4	6.0e-10
WP_014480473.1|3740975_3742073_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_003229604.1|3742122_3743541_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_014480472.1|3743553_3744153_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_014480470.1|3744272_3745277_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_014480469.1|3745504_3746779_+	trigger factor	NA	NA	NA	NA	NA
WP_003229613.1|3747050_3748313_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	64.9	1.3e-148
WP_004398923.1|3748466_3750125_+|protease	Lon protease 2	protease	A0A1V0SHJ7	Hokovirus	33.7	8.1e-05
WP_014480468.1|3750305_3752630_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	43.7	2.6e-182
WP_003229621.1|3752626_3753214_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_014477563.1|3753235_3753733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004399038.1|3753962_3755330_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003222575.1|3755337_3756168_+	protein HemX	NA	NA	NA	NA	NA
WP_014480467.1|3756200_3757145_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_014480466.1|3757134_3757923_+	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_014480465.1|3757919_3758894_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_014480464.1|3758923_3760216_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_014480463.1|3760346_3762068_+|coat	spore coat morphogenetic protein SpoVID	coat	NA	NA	NA	NA
WP_014480462.1|3762100_3763126_+|coat	spore coat protein CotN	coat	NA	NA	NA	NA
