assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001908415.1_ASM190841v1	NZ_CP018614	Lactobacillus delbrueckii subsp. indicus strain JCM 15610, complete genome	1	272126-272220	1	CRISPRCasFinder	no		c2c9_V-U4,Cas14u_CAS-V,WYL,cas14j,cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AGGCCAGCTCTAAGTCGGCGGCT	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,Cas14u_CAS-V,WYL,cas14j,cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|84aa|down_4|NZ_CP018614.1_276104_276356_+,NA|95aa|down_9|NZ_CP018614.1_279007_279292_+	NA|422aa|up_9|NZ_CP018614.1_261522_262788_-	COG3919, COG3919, Predicted ATP-grasp enzyme [General function prediction only]	NA|323aa|up_8|NZ_CP018614.1_262881_263850_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|311aa|up_7|NZ_CP018614.1_264879_265812_+	PRK09485, mmuM, homocysteine methyltransferase; Provisional	NA|154aa|up_6|NZ_CP018614.1_265867_266329_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|151aa|up_5|NZ_CP018614.1_266696_267149_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|336aa|up_4|NZ_CP018614.1_267138_268146_+	cd08963, L-asparaginase_I, Type I (cytosolic) bacterial L-asparaginase	NA|280aa|up_3|NZ_CP018614.1_268242_269082_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|159aa|up_2|NZ_CP018614.1_269130_269607_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|478aa|up_1|NZ_CP018614.1_269686_271120_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|185aa|up_0|NZ_CP018614.1_271188_271743_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|89aa|down_0|NZ_CP018614.1_272845_273112_-	pfam06961, DUF1294, Protein of unknown function (DUF1294)	NA|248aa|down_1|NZ_CP018614.1_273234_273978_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|421aa|down_2|NZ_CP018614.1_274189_275452_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|96aa|down_3|NZ_CP018614.1_275634_275922_+	pfam08951, EntA_Immun, Enterocin A Immunity	NA|84aa|down_4|NZ_CP018614.1_276104_276356_+	NA	NA|207aa|down_5|NZ_CP018614.1_276489_277110_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|267aa|down_6|NZ_CP018614.1_277111_277912_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|237aa|down_7|NZ_CP018614.1_277908_278619_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|82aa|down_8|NZ_CP018614.1_278740_278986_+	cd07321, Extradiol_Dioxygenase_3A_like, Subunit A of Class III extradiol dioxygenases	NA|95aa|down_9|NZ_CP018614.1_279007_279292_+	NA
GCF_001908415.1_ASM190841v1	NZ_CP018614	Lactobacillus delbrueckii subsp. indicus strain JCM 15610, complete genome	2	1333981-1336388	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	c2c9_V-U4,Cas14u_CAS-V,WYL,cas14j,cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	AGGATCACCCCCACTTGCGTGGGGAATAC,GGATCACCCCCACTTGCGTGGGGAATAC,GGATCACCCCCACTTGCGTGGGGAATAC	29,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	39,39,34	39	TypeI-E	c2c9_V-U4,Cas14u_CAS-V,WYL,cas14j,cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|754aa|up_9|NZ_CP018614.1_1322011_1324273_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|315aa|up_8|NZ_CP018614.1_1324433_1325378_-	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|169aa|up_7|NZ_CP018614.1_1325440_1325947_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|453aa|up_6|NZ_CP018614.1_1326004_1327363_-	pfam06738, ThrE, Putative threonine/serine exporter	NA|388aa|up_5|NZ_CP018614.1_1327531_1328695_-	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|409aa|up_4|NZ_CP018614.1_1328698_1329925_-	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|367aa|up_3|NZ_CP018614.1_1329926_1331027_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|420aa|up_2|NZ_CP018614.1_1331181_1332441_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|up_1|NZ_CP018614.1_1332443_1333112_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|203aa|up_0|NZ_CP018614.1_1333114_1333723_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	DEDDh|291aa|down_0|NZ_CP018614.1_1336417_1337290_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|317aa|down_1|NZ_CP018614.1_1337286_1338237_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|208aa|down_2|NZ_CP018614.1_1338239_1338863_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|234aa|down_3|NZ_CP018614.1_1338875_1339577_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|359aa|down_4|NZ_CP018614.1_1339557_1340634_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|206aa|down_5|NZ_CP018614.1_1340651_1341269_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|585aa|down_6|NZ_CP018614.1_1341249_1343004_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|922aa|down_7|NZ_CP018614.1_1343006_1345772_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|75aa|down_8|NZ_CP018614.1_1346761_1346986_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|458aa|down_9|NZ_CP018614.1_1347356_1348730_-	pfam01609, DDE_Tnp_1, Transposase DDE domain
GCF_001908415.1_ASM190841v1	NZ_CP018614	Lactobacillus delbrueckii subsp. indicus strain JCM 15610, complete genome	3	1679971-1680060	3	CRISPRCasFinder	no		c2c9_V-U4,Cas14u_CAS-V,WYL,cas14j,cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CCGGAAGTCCATGGGCACGAAGGTGTCAT	29	1	1	1680000-1680031	NZ_CP018614.1_1336394-1336425	NA	1	1	Orphan	c2c9_V-U4,Cas14u_CAS-V,WYL,cas14j,cas3,DEDDh,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|356aa|up_7|NZ_CP018614.1_1672645_1673713_+,NA|74aa|down_4|NZ_CP018614.1_1685250_1685472_-	NA|248aa|up_9|NZ_CP018614.1_1669892_1670636_-	pfam13596, PAS_10, PAS domain	NA|532aa|up_8|NZ_CP018614.1_1670836_1672432_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|356aa|up_7|NZ_CP018614.1_1672645_1673713_+	NA	NA|305aa|up_6|NZ_CP018614.1_1673781_1674696_+	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|273aa|up_5|NZ_CP018614.1_1674851_1675670_+	pfam13413, HTH_25, Helix-turn-helix domain	NA|186aa|up_4|NZ_CP018614.1_1675726_1676284_-	PRK00529, PRK00529, elongation factor P; Validated	NA|305aa|up_3|NZ_CP018614.1_1676337_1677252_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|190aa|up_2|NZ_CP018614.1_1677354_1677924_+	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|148aa|up_1|NZ_CP018614.1_1678052_1678496_+	smart00850, LytTR, LytTr DNA-binding domain	NA|250aa|up_0|NZ_CP018614.1_1678501_1679251_+	pfam09922, DUF2154, Cell wall-active antibiotics response 4TMS YvqF	NA|760aa|down_0|NZ_CP018614.1_1680496_1682776_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|221aa|down_1|NZ_CP018614.1_1682971_1683634_+	cd04268, ZnMc_MMP_like, Zinc-dependent metalloprotease, MMP_like subfamily	NA|218aa|down_2|NZ_CP018614.1_1683648_1684302_+	smart00855, PGAM, Phosphoglycerate mutase family	NA|231aa|down_3|NZ_CP018614.1_1684407_1685100_+	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins	NA|74aa|down_4|NZ_CP018614.1_1685250_1685472_-	NA	NA|585aa|down_5|NZ_CP018614.1_1685669_1687424_-	cd08582, GDPD_like_2, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases	NA|508aa|down_6|NZ_CP018614.1_1687566_1689090_-	pfam13175, AAA_15, AAA ATPase domain	NA|236aa|down_7|NZ_CP018614.1_1689100_1689808_-	pfam04892, VanZ, VanZ like family	NA|143aa|down_8|NZ_CP018614.1_1689995_1690424_+	pfam04138, GtrA, GtrA-like protein	NA|150aa|down_9|NZ_CP018614.1_1690533_1690983_+	pfam04892, VanZ, VanZ like family
