The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	8685	18947	2094030		Microbacterium_phage(16.67%)	7	NA	NA
WP_012774881.1|8685_12405_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.9	8.6e-39
WP_011921648.1|12407_13862_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.2e-58
WP_012774882.1|13917_14940_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A127KMF9	Cyanophage	42.7	1.3e-58
WP_011922533.1|14936_15488_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.5	3.6e-26
WP_011921652.1|15497_17045_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.6	2.6e-74
WP_011921653.1|17170_18433_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_011921654.1|18458_18947_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.0	2.7e-17
>prophage 2
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	518433	531547	2094030		Streptococcus_phage(100.0%)	12	NA	NA
WP_011922101.1|518433_519072_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	99.5	1.0e-125
WP_012775018.1|519179_521648_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	98.5	0.0e+00
WP_011922103.1|521807_522884_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	99.2	1.5e-193
WP_011922104.1|522948_524187_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	96.8	1.0e-217
WP_011922105.1|524196_524982_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	95.4	1.0e-130
WP_011922106.1|525004_525409_-	TetR/AcrR family transcriptional regulator	NA	A0A1X9I6A2	Streptococcus_phage	99.3	3.2e-64
WP_002938910.1|525536_526388_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	98.6	1.3e-152
WP_011922108.1|526486_527746_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	98.8	1.2e-239
WP_012775019.1|527868_528603_+	peroxide stress protein YaaA	NA	A0A1X9I5I0	Streptococcus_phage	99.5	1.5e-120
WP_012775020.1|528707_530153_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	99.5	2.4e-226
WP_011922111.1|530170_530860_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	96.1	1.3e-110
WP_011922733.1|530869_531547_+	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	98.2	4.0e-120
>prophage 3
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	612464	627809	2094030	transposase	Streptococcus_phage(100.0%)	17	NA	NA
WP_012775040.1|612464_614702_+	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	96.7	1.2e-99
WP_002935351.1|614703_614847_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011922763.1|615026_615683_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	98.6	2.7e-113
WP_011922194.1|615776_616604_+	hypothetical protein	NA	M1PFV6	Streptococcus_phage	98.5	1.0e-133
WP_011922195.1|616609_617881_+	hypothetical protein	NA	M1PLC8	Streptococcus_phage	98.1	1.3e-207
WP_002935357.1|617917_618784_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	99.7	4.6e-153
WP_012775041.1|618958_619597_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	98.1	1.0e-112
WP_011922767.1|619593_620478_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	98.6	5.6e-154
WP_002935361.1|620497_620815_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	100.0	3.1e-54
WP_002935362.1|620816_621680_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	99.7	2.1e-158
WP_011922200.1|622149_623241_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	100.0	2.4e-207
WP_011922201.1|623240_623798_+	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	94.6	5.9e-93
WP_011922202.1|623851_625033_+	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	99.7	7.8e-220
WP_011922203.1|625035_625542_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	97.0	7.0e-93
WP_002935368.1|625525_625879_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	100.0	1.9e-60
WP_011922204.1|625895_626795_-	cation transporter	NA	M1Q1N9	Streptococcus_phage	99.7	5.1e-163
WP_012775042.1|626981_627809_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	100.0	2.9e-152
>prophage 4
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	788126	795156	2094030	protease	Bacillus_phage(33.33%)	8	NA	NA
WP_011922359.1|788126_788966_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	55.7	1.7e-88
WP_011922360.1|789251_789764_+	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	36.6	1.6e-20
WP_002934972.1|789766_789940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002934974.1|789961_791188_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.2	1.2e-133
WP_012775089.1|791243_791831_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_012028095.1|791853_792267_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	42.5	4.3e-24
WP_011922364.1|792370_793042_+	membrane protein	NA	A0A1S5SAM6	Streptococcus_phage	35.2	3.0e-06
WP_002943192.1|793323_795156_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	38.8	2.2e-19
>prophage 5
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	864447	884542	2094030	integrase	Streptococcus_phage(94.74%)	24	862547:862561	890744:890758
862547:862561	attL	TTGTGATAAAATTTC	NA	NA	NA	NA
WP_001291561.1|864447_865665_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|865746_865950_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001845478.1|865933_866185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000857133.1|866410_866641_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|866637_867060_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_013670292.1|867287_867359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001227347.1|867563_867917_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_011058338.1|867976_868162_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
WP_001574275.1|868262_870182_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	95.0	0.0e+00
WP_011058339.1|870197_870284_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224319.1|870558_871491_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_000769868.1|871487_872489_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|872485_874663_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|874665_877113_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|877096_877603_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|877577_878075_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|878191_878413_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|878455_879661_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|879683_879836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|879838_881224_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|881252_881639_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|881654_881969_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_001825268.1|881991_882111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012775114.1|882724_884542_-	ATP-dependent helicase	NA	G3MA40	Bacillus_virus	21.0	7.5e-12
890744:890758	attR	GAAATTTTATCACAA	NA	NA	NA	NA
>prophage 6
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	896466	917133	2094030	transposase	Streptococcus_phage(50.0%)	16	NA	NA
WP_012028148.1|896466_898542_-	ATP-binding cassette domain-containing protein	NA	F2Y165	Organic_Lake_phycodnavirus	27.7	2.6e-16
WP_011922450.1|898547_899660_-	lantibiotic-modifying protein	NA	NA	NA	NA	NA
WP_002360685.1|900187_900484_+	hypothetical protein	NA	A0A2K5B2B2	Erysipelothrix_phage	91.8	4.6e-44
WP_000323438.1|900484_900901_+	recombinase	NA	A0A2K5B2B3	Erysipelothrix_phage	98.6	1.2e-71
WP_002390960.1|900920_902465_+	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	88.7	1.8e-256
WP_000205227.1|902607_902832_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000233000.1|902846_903716_+	hypothetical protein	NA	A0A1X9I6C9	Streptococcus_phage	90.7	6.7e-152
WP_000662263.1|903696_904431_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_002294505.1|904463_905327_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	A0A1X9I6F2	Streptococcus_phage	100.0	8.7e-168
WP_002294507.1|905370_905898_+	adenine phosphoribosyltransferase	NA	A0A1X9I6E2	Streptococcus_phage	100.0	1.9e-93
WP_002338419.1|906125_907445_+|transposase	IS1380-like element ISSsu5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	100.0	1.3e-252
WP_011922451.1|907633_909031_-	DUF4135 domain-containing protein	NA	NA	NA	NA	NA
WP_012775117.1|909114_909288_-	type A2 lantipeptide	NA	NA	NA	NA	NA
WP_012775118.1|909628_909925_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011922452.1|909938_910238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012775119.1|910308_917133_-	DEAD/DEAH box helicase family protein	NA	A0A248SL14	Klebsiella_phage	31.2	1.8e-215
>prophage 7
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	1273183	1278968	2094030		Bacillus_phage(33.33%)	6	NA	NA
WP_012775217.1|1273183_1273930_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	32.9	3.4e-27
WP_012027299.1|1274095_1274638_-	ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	35.1	5.9e-21
WP_012027300.1|1275156_1275960_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.6	2.8e-35
WP_012027301.1|1275966_1277316_-	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.5	2.1e-35
WP_012775218.1|1277308_1278013_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	1.1e-38
WP_012027304.1|1278206_1278968_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.4	5.0e-34
>prophage 8
NZ_CP018908	Streptococcus suis strain SS2-1 chromosome, complete genome	2094030	1428761	1438804	2094030	integrase	Streptococcus_phage(90.0%)	18	1420123:1420137	1446215:1446229
1420123:1420137	attL	TGACAAGATATTTTC	NA	NA	NA	NA
WP_012775260.1|1428761_1429304_-|integrase	site-specific integrase	integrase	A0A1S5SCL7	Streptococcus_phage	78.9	1.1e-80
WP_012775261.1|1429290_1429485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027449.1|1429773_1431306_-	primase	NA	A0A1X9I717	Streptococcus_phage	42.3	4.9e-105
WP_012027450.1|1431320_1431893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027451.1|1431885_1432086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012775262.1|1432097_1432301_-	membrane protein	NA	A0A1X9I5T6	Streptococcus_phage	73.1	2.4e-20
WP_012027452.1|1432321_1432639_-	hypothetical protein	NA	A0A1X9I5Z6	Streptococcus_phage	41.0	1.3e-09
WP_012027454.1|1432992_1433256_-	hypothetical protein	NA	A0A1S5S7M1	Streptococcus_phage	43.8	1.0e-07
WP_012775263.1|1433387_1433795_-	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	52.2	1.8e-35
WP_012027456.1|1433806_1434124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027457.1|1434110_1434332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027458.1|1434328_1434571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027459.1|1434567_1434768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027460.1|1434757_1435069_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	40.7	2.5e-08
WP_012027461.1|1435365_1435554_-	helix-turn-helix transcriptional regulator	NA	R9QNG3	Lactococcus_phage	42.4	2.0e-05
WP_012027462.1|1435705_1436227_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	65.1	8.7e-14
WP_012028388.1|1436282_1436975_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_012775264.1|1437661_1438804_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	39.7	2.5e-69
1446215:1446229	attR	GAAAATATCTTGTCA	NA	NA	NA	NA
