assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	1	334951-335063	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTCCCGTTGGCGCCGTTGCCGAACAGC	27	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP016972.1_334520_334703_-,NA	NA|398aa|up_9|NZ_CP016972.1_324698_325892_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP016972.1_325927_327610_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP016972.1_327626_329822_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP016972.1_329935_331069_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP016972.1_331065_331686_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP016972.1_331782_332364_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP016972.1_332293_333019_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP016972.1_333108_334029_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP016972.1_334068_334497_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP016972.1_334520_334703_-	NA	NA|838aa|down_0|NZ_CP016972.1_337920_340434_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP016972.1_340724_342335_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP016972.1_342358_343267_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP016972.1_343490_345386_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP016972.1_345382_346999_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP016972.1_346995_350988_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP016972.1_350984_351293_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP016972.1_351295_352837_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP016972.1_352885_353179_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP016972.1_353208_353499_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	2	335930-336083	2	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTCCCGTTGGCGCCGTTGCCGAACAGC	27	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP016972.1_334520_334703_-,NA	NA|398aa|up_9|NZ_CP016972.1_324698_325892_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP016972.1_325927_327610_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP016972.1_327626_329822_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP016972.1_329935_331069_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP016972.1_331065_331686_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP016972.1_331782_332364_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP016972.1_332293_333019_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP016972.1_333108_334029_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP016972.1_334068_334497_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP016972.1_334520_334703_-	NA	NA|838aa|down_0|NZ_CP016972.1_337920_340434_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP016972.1_340724_342335_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP016972.1_342358_343267_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP016972.1_343490_345386_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP016972.1_345382_346999_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP016972.1_346995_350988_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP016972.1_350984_351293_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP016972.1_351295_352837_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP016972.1_352885_353179_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP016972.1_353208_353499_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	3	336248-336358	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTCCCGTTGGCGCCGTTGCCGAACAGC	27	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP016972.1_334520_334703_-,NA	NA|398aa|up_9|NZ_CP016972.1_324698_325892_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP016972.1_325927_327610_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP016972.1_327626_329822_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP016972.1_329935_331069_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP016972.1_331065_331686_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP016972.1_331782_332364_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP016972.1_332293_333019_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP016972.1_333108_334029_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP016972.1_334068_334497_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP016972.1_334520_334703_-	NA	NA|838aa|down_0|NZ_CP016972.1_337920_340434_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP016972.1_340724_342335_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP016972.1_342358_343267_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP016972.1_343490_345386_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP016972.1_345382_346999_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP016972.1_346995_350988_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP016972.1_350984_351293_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP016972.1_351295_352837_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP016972.1_352885_353179_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP016972.1_353208_353499_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	4	367824-368522	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	368112-368153|368187-368219	NZ_CP016972.1_376144-376185|NZ_CP016972.1_374959-374991	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP016972.1_364836_365139_+,NA|161aa|down_1|NZ_CP016972.1_377933_378416_-,NA|410aa|down_5|NZ_CP016972.1_380532_381762_+	NA|262aa|up_9|NZ_CP016972.1_359531_360317_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP016972.1_360305_361109_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP016972.1_361118_362516_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP016972.1_362694_364470_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP016972.1_364612_364840_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP016972.1_364836_365139_+	NA	NA|74aa|up_3|NZ_CP016972.1_365186_365408_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP016972.1_365404_365830_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP016972.1_365965_366598_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP016972.1_366594_367503_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP016972.1_377274_377946_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP016972.1_377933_378416_-	NA	NA|239aa|down_2|NZ_CP016972.1_378473_379190_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP016972.1_379291_379948_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP016972.1_380017_380509_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP016972.1_380532_381762_+	NA	NA|621aa|down_6|NZ_CP016972.1_381916_383779_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP016972.1_383850_384237_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP016972.1_384239_384902_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP016972.1_384962_385847_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	5	693389-693465	5	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP016972.1_679073_679289_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP016972.1_679285_679693_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP016972.1_679752_680439_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP016972.1_680592_683226_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP016972.1_683248_685636_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP016972.1_685773_686496_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP016972.1_686492_687290_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP016972.1_687291_688179_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP016972.1_688184_689399_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP016972.1_690422_691868_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP016972.1_694600_696151_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP016972.1_696202_696595_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP016972.1_696591_696849_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP016972.1_697031_698267_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP016972.1_698517_698931_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP016972.1_698927_699164_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP016972.1_699267_699774_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP016972.1_699887_700358_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP016972.1_700401_701163_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP016972.1_701219_701531_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	6	927980-928927	1	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGNGCCGGCGGNNCCGGCGG	21	1	3	928763-928798|928763-928798|928763-928798	NZ_CP016972.1_676492-676457|NZ_CP016972.1_1215112-1215147|NZ_CP016972.1_2434890-2434855	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP016972.1_932937_933489_-,NA|81aa|down_8|NZ_CP016972.1_938952_939195_+	NA|685aa|up_9|NZ_CP016972.1_915616_917671_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP016972.1_917836_919006_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP016972.1_919093_920110_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP016972.1_920271_920913_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP016972.1_920993_922049_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP016972.1_922100_922493_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP016972.1_922550_922973_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP016972.1_922934_923225_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP016972.1_923329_924235_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP016972.1_924253_925069_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP016972.1_929196_931845_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP016972.1_932312_932957_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP016972.1_932937_933489_-	NA	NA|218aa|down_3|NZ_CP016972.1_933638_934292_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP016972.1_934362_935391_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP016972.1_936079_936850_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP016972.1_936936_937749_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP016972.1_937816_938677_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP016972.1_938952_939195_+	NA	NA|431aa|down_9|NZ_CP016972.1_939471_940764_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	7	1192679-1192787	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP016972.1_1182046_1183678_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP016972.1_1183753_1184818_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP016972.1_1184870_1185344_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP016972.1_1185377_1186241_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP016972.1_1186245_1187103_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP016972.1_1187103_1188186_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP016972.1_1188266_1188686_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP016972.1_1188797_1189364_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP016972.1_1189360_1189756_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP016972.1_1189783_1191787_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP016972.1_1193872_1195636_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP016972.1_1195632_1196406_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP016972.1_1196417_1197455_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP016972.1_1197641_1198478_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP016972.1_1198593_1199445_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP016972.1_1199518_1200736_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP016972.1_1200788_1201733_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|298aa|down_7|NZ_CP016972.1_1202129_1203023_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP016972.1_1203079_1204474_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP016972.1_1204675_1205398_+	pfam06271, RDD, RDD family
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	8	1213313-1214169	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	73	1213696-1213717|1213741-1213756|1213879-1213900|1213879-1213900|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014|1213996-1214014	NZ_CP016972.1_2973722-2973701|NZ_CP016972.1_2099716-2099701|NZ_CP016972.1_838794-838815|NZ_CP016972.1_1219007-1219028|NZ_CP016972.1_676156-676138|NZ_CP016972.1_1214839-1214857|NZ_CP016972.1_1218980-1218998|NZ_CP016972.1_1219052-1219070|NZ_CP016972.1_1632062-1632044|NZ_CP016972.1_1634888-1634870|NZ_CP016972.1_2000561-2000543|NZ_CP016972.1_2072644-2072626|NZ_CP016972.1_2073091-2073073|NZ_CP016972.1_2073190-2073172|NZ_CP016972.1_2815270-2815252|NZ_CP016972.1_2818798-2818780|NZ_CP016972.1_151542-151560|NZ_CP016972.1_335143-335125|NZ_CP016972.1_336562-336544|NZ_CP016972.1_337015-336997|NZ_CP016972.1_337066-337048|NZ_CP016972.1_337075-337057|NZ_CP016972.1_339364-339346|NZ_CP016972.1_339493-339475|NZ_CP016972.1_339760-339742|NZ_CP016972.1_339789-339807|NZ_CP016972.1_339883-339865|NZ_CP016972.1_364414-364396|NZ_CP016972.1_444789-444771|NZ_CP016972.1_548133-548115|NZ_CP016972.1_625347-625365|NZ_CP016972.1_625569-625587|NZ_CP016972.1_675322-675304|NZ_CP016972.1_841577-841595|NZ_CP016972.1_1092343-1092361|NZ_CP016972.1_1092991-1093009|NZ_CP016972.1_1097049-1097031|NZ_CP016972.1_1214368-1214386|NZ_CP016972.1_1214758-1214776|NZ_CP016972.1_1219400-1219418|NZ_CP016972.1_1490574-1490556|NZ_CP016972.1_1620026-1620008|NZ_CP016972.1_1620479-1620461|NZ_CP016972.1_1637608-1637590|NZ_CP016972.1_1637617-1637599|NZ_CP016972.1_1865896-1865878|NZ_CP016972.1_1866424-1866406|NZ_CP016972.1_1999835-1999817|NZ_CP016972.1_2012556-2012574|NZ_CP016972.1_2099914-2099896|NZ_CP016972.1_2314609-2314591|NZ_CP016972.1_2368061-2368043|NZ_CP016972.1_2430716-2430734|NZ_CP016972.1_2434803-2434785|NZ_CP016972.1_2580299-2580281|NZ_CP016972.1_2706661-2706679|NZ_CP016972.1_2808585-2808567|NZ_CP016972.1_2809167-2809149|NZ_CP016972.1_3067758-3067776|NZ_CP016972.1_3067857-3067875|NZ_CP016972.1_3717658-3717676|NZ_CP016972.1_3751363-3751345|NZ_CP016972.1_3751987-3751969|NZ_CP016972.1_3752230-3752212|NZ_CP016972.1_3752363-3752345|NZ_CP016972.1_3816235-3816253|NZ_CP016972.1_3816418-3816436|NZ_CP016972.1_3816586-3816604|NZ_CP016972.1_3944399-3944417|NZ_CP016972.1_3946129-3946147|NZ_CP016972.1_3955215-3955233|NZ_CP016972.1_4046313-4046295|NZ_CP016972.1_4108839-4108857	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP016972.1_1208745_1209012_+,NA|61aa|down_3|NZ_CP016972.1_1216587_1216770_+,NA|35aa|down_4|NZ_CP016972.1_1216879_1216984_+	NA|465aa|up_9|NZ_CP016972.1_1203079_1204474_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP016972.1_1204675_1205398_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP016972.1_1205429_1206596_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP016972.1_1206666_1207161_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP016972.1_1207346_1207781_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP016972.1_1207882_1208749_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP016972.1_1208745_1209012_+	NA	NA|674aa|up_2|NZ_CP016972.1_1208998_1211020_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP016972.1_1211118_1211847_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP016972.1_1211957_1212746_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP016972.1_1215402_1215723_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP016972.1_1215875_1216310_+	pfam00934, PE, PE family	NA|63aa|down_2|NZ_CP016972.1_1216387_1216576_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP016972.1_1216587_1216770_+	NA	NA|35aa|down_4|NZ_CP016972.1_1216879_1216984_+	NA	NA|152aa|down_5|NZ_CP016972.1_1216961_1217417_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP016972.1_1217831_1220393_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP016972.1_1220610_1221549_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP016972.1_1221936_1223217_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP016972.1_1223321_1224149_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	9	1573549-1574621	8	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP016972.1_1565312_1565630_+,NA	NA|103aa|up_9|NZ_CP016972.1_1562827_1563136_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP016972.1_1563132_1564752_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP016972.1_1565312_1565630_+	NA	NA|209aa|up_6|NZ_CP016972.1_1565764_1566391_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP016972.1_1566456_1566789_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP016972.1_1566804_1568061_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP016972.1_1568188_1569400_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP016972.1_1569472_1570951_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP016972.1_1570947_1572333_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP016972.1_1572410_1573445_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP016972.1_1575475_1575877_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP016972.1_1575873_1576131_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP016972.1_1576213_1577173_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP016972.1_1577197_1578160_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP016972.1_1578293_1578896_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP016972.1_1578976_1580944_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP016972.1_1580961_1581786_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP016972.1_1581954_1582437_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP016972.1_1582508_1583333_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP016972.1_1583529_1584468_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	10	1638330-1638659	2	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	NGCCGCCGGCNCCGCCGN	18	3	3	1638471-1638506|1638525-1638551|1638615-1638641	NZ_CP016972.1_1634869-1634904|NZ_CP016972.1_1634923-1634949|NZ_CP016972.1_1635013-1635039	NA	6	6	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NZ_CP016972.1_1624487_1624601_-,NA|137aa|up_7|NZ_CP016972.1_1624650_1625061_-,NA|288aa|down_2|NZ_CP016972.1_1642250_1643114_+	NA|162aa|up_9|NZ_CP016972.1_1623570_1624056_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NZ_CP016972.1_1624487_1624601_-	NA	NA|137aa|up_7|NZ_CP016972.1_1624650_1625061_-	NA	NA|248aa|up_6|NZ_CP016972.1_1625077_1625821_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_5|NZ_CP016972.1_1625817_1626729_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NZ_CP016972.1_1626781_1628326_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NZ_CP016972.1_1628322_1629444_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NZ_CP016972.1_1629460_1631563_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1399aa|up_1|NZ_CP016972.1_1632001_1636198_-	pfam00934, PE, PE family	NA|309aa|up_0|NZ_CP016972.1_1636599_1637526_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP016972.1_1639951_1641217_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP016972.1_1641244_1642231_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP016972.1_1642250_1643114_+	NA	NA|311aa|down_3|NZ_CP016972.1_1643063_1643996_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP016972.1_1644107_1644893_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP016972.1_1644889_1645831_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP016972.1_1645933_1647709_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP016972.1_1647756_1648563_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP016972.1_1648559_1651100_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP016972.1_1651096_1652290_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	11	2099386-2099640	3	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2099467-2099484|2099467-2099484|2099557-2099574	NZ_CP016972.1_402440-402423|NZ_CP016972.1_608802-608785|NZ_CP016972.1_3463543-3463526	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP016972.1_2098745_2099009_-,NA	NA|165aa|up_9|NZ_CP016972.1_2085039_2085534_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP016972.1_2085937_2086615_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP016972.1_2086973_2089799_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP016972.1_2090025_2090886_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP016972.1_2090926_2091793_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP016972.1_2091797_2093684_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP016972.1_2093699_2095733_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP016972.1_2095852_2098078_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP016972.1_2098353_2098749_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP016972.1_2098745_2099009_-	NA	NA|346aa|down_0|NZ_CP016972.1_2100777_2101815_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP016972.1_2101814_2103182_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP016972.1_2103355_2104792_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|486aa|down_3|NZ_CP016972.1_2104827_2106285_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP016972.1_2106314_2107265_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP016972.1_2107279_2107696_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP016972.1_2107973_2108396_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP016972.1_2108444_2108747_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP016972.1_2108743_2109058_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP016972.1_2109057_2110791_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	12	2179911-2180130	9	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_3|NZ_CP016972.1_2171017_2171425_-,NA|127aa|down_5|NZ_CP016972.1_2187646_2188027_-	NA|741aa|up_9|NZ_CP016972.1_2164985_2167208_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_8|NZ_CP016972.1_2167245_2167689_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_7|NZ_CP016972.1_2167802_2168396_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_6|NZ_CP016972.1_2168478_2169084_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_5|NZ_CP016972.1_2169183_2170188_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_4|NZ_CP016972.1_2170287_2171040_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_3|NZ_CP016972.1_2171017_2171425_-	NA	NA|368aa|up_2|NZ_CP016972.1_2171559_2172663_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_1|NZ_CP016972.1_2172662_2173859_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|1460aa|up_0|NZ_CP016972.1_2174028_2178408_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP016972.1_2182157_2182622_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP016972.1_2182719_2183583_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP016972.1_2183620_2184892_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP016972.1_2185163_2186279_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP016972.1_2186269_2187610_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP016972.1_2187646_2188027_-	NA	NA|621aa|down_6|NZ_CP016972.1_2188183_2190046_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP016972.1_2190053_2190533_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP016972.1_2190769_2191543_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP016972.1_2191546_2192314_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	13	3132349-3133703	1,10,4	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-D,Type III-B,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	15,17,18	18	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP016972.1_3125628_3125883_-,NA|135aa|up_7|NZ_CP016972.1_3126030_3126435_+,NA|64aa|up_6|NZ_CP016972.1_3126431_3126623_+,NA|86aa|up_4|NZ_CP016972.1_3128209_3128467_+,NA|104aa|up_3|NZ_CP016972.1_3128571_3128883_+,NA|203aa|up_2|NZ_CP016972.1_3129302_3129911_+,NA	NA|92aa|up_9|NZ_CP016972.1_3125177_3125453_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP016972.1_3125628_3125883_-	NA	NA|135aa|up_7|NZ_CP016972.1_3126030_3126435_+	NA	NA|64aa|up_6|NZ_CP016972.1_3126431_3126623_+	NA	NA|385aa|up_5|NZ_CP016972.1_3126821_3127976_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP016972.1_3128209_3128467_+	NA	NA|104aa|up_3|NZ_CP016972.1_3128571_3128883_+	NA	NA|203aa|up_2|NZ_CP016972.1_3129302_3129911_+	NA	NA|470aa|up_1|NZ_CP016972.1_3129981_3131391_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP016972.1_3131387_3132200_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP016972.1_3133729_3134991_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP016972.1_3136788_3137130_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP016972.1_3137130_3138147_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP016972.1_3138159_3139308_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP016972.1_3139403_3140531_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP016972.1_3140527_3141436_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP016972.1_3141416_3142127_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP016972.1_3142136_3142511_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_8|NZ_CP016972.1_3142507_3144937_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|315aa|down_9|NZ_CP016972.1_3144933_3145878_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	14	3135026-3136740	11,5,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-D,Type III-B,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP016972.1_3125628_3125883_-,NA|135aa|up_8|NZ_CP016972.1_3126030_3126435_+,NA|64aa|up_7|NZ_CP016972.1_3126431_3126623_+,NA|86aa|up_5|NZ_CP016972.1_3128209_3128467_+,NA|104aa|up_4|NZ_CP016972.1_3128571_3128883_+,NA|203aa|up_3|NZ_CP016972.1_3129302_3129911_+,NA	NA|85aa|up_9|NZ_CP016972.1_3125628_3125883_-	NA	NA|135aa|up_8|NZ_CP016972.1_3126030_3126435_+	NA	NA|64aa|up_7|NZ_CP016972.1_3126431_3126623_+	NA	NA|385aa|up_6|NZ_CP016972.1_3126821_3127976_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP016972.1_3128209_3128467_+	NA	NA|104aa|up_4|NZ_CP016972.1_3128571_3128883_+	NA	NA|203aa|up_3|NZ_CP016972.1_3129302_3129911_+	NA	NA|470aa|up_2|NZ_CP016972.1_3129981_3131391_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP016972.1_3131387_3132200_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP016972.1_3133729_3134991_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP016972.1_3136788_3137130_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP016972.1_3137130_3138147_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP016972.1_3138159_3139308_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP016972.1_3139403_3140531_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP016972.1_3140527_3141436_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP016972.1_3141416_3142127_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP016972.1_3142136_3142511_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_7|NZ_CP016972.1_3142507_3144937_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|315aa|down_8|NZ_CP016972.1_3144933_3145878_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP016972.1_3146055_3146601_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	15	3754557-3755098	6	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP016972.1_3769199_3769487_-,NA|87aa|down_9|NZ_CP016972.1_3782607_3782868_-	NA|282aa|up_9|NZ_CP016972.1_3732080_3732926_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP016972.1_3733400_3733841_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP016972.1_3733874_3734744_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP016972.1_3734764_3735775_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP016972.1_3736059_3736692_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP016972.1_3736758_3737988_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP016972.1_3738270_3739620_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP016972.1_3739631_3740771_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP016972.1_3740767_3741499_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|3100aa|up_0|NZ_CP016972.1_3741507_3750807_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP016972.1_3757069_3757327_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP016972.1_3757582_3767056_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP016972.1_3767681_3768128_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|273aa|down_3|NZ_CP016972.1_3768164_3768983_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP016972.1_3769199_3769487_-	NA	NA|3717aa|down_5|NZ_CP016972.1_3769823_3780974_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP016972.1_3781217_3782012_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP016972.1_3782093_3782465_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|137aa|down_8|NZ_CP016972.1_3782362_3782773_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP016972.1_3782607_3782868_-	NA
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	16	3962601-3964695	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNNCGGCGGCNCCGGCGGCNNCGGCGGNNNCGGCGGC	37	4	14	3962638-3962732|3962638-3962732|3962638-3962732|3962770-3962843|3962770-3962843|3962770-3962843|3963535-3963569|3963535-3963569|3963535-3963569|3963535-3963569|3963535-3963569|3964426-3964451|3964426-3964451|3964426-3964451	NZ_CP016972.1_3961936-3962030|NZ_CP016972.1_3962287-3962381|NZ_CP016972.1_3961585-3961679|NZ_CP016972.1_3961717-3961790|NZ_CP016972.1_3962068-3962141|NZ_CP016972.1_3962419-3962492|NZ_CP016972.1_3961531-3961565|NZ_CP016972.1_3961873-3961907|NZ_CP016972.1_3962224-3962258|NZ_CP016972.1_3962575-3962609|NZ_CP016972.1_3946685-3946719|NZ_CP016972.1_3955717-3955742|NZ_CP016972.1_3956053-3956078|NZ_CP016972.1_3956399-3956424	NA	24	24	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP016972.1_3968009_3968849_+	NA|318aa|up_9|NZ_CP016972.1_3934966_3935920_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP016972.1_3935944_3936136_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP016972.1_3936350_3937553_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP016972.1_3937577_3938699_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP016972.1_3938769_3940278_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1382aa|up_4|NZ_CP016972.1_3940448_3944594_+	pfam00934, PE, PE family	NA|2095aa|up_3|NZ_CP016972.1_3944884_3951169_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP016972.1_3951335_3952883_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP016972.1_3952879_3953716_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP016972.1_3959550_3960207_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP016972.1_3965402_3967049_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP016972.1_3967122_3967914_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP016972.1_3968009_3968849_+	NA	NA|399aa|down_3|NZ_CP016972.1_3968903_3970100_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP016972.1_3970128_3970839_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP016972.1_3970903_3971947_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP016972.1_3972099_3973011_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP016972.1_3973026_3974091_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP016972.1_3974107_3975292_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP016972.1_3975333_3976365_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_001938725.1_ASM193872v1	NZ_CP016972	Mycobacterium tuberculosis H37Ra chromosome, complete genome	17	4125256-4125344	12	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP016972.1_4115842_4116613_-,NA|119aa|up_3|NZ_CP016972.1_4121747_4122104_+,NA|52aa|up_2|NZ_CP016972.1_4122203_4122359_+,NA|233aa|up_0|NZ_CP016972.1_4124360_4125059_-,NA|126aa|down_6|NZ_CP016972.1_4130579_4130957_+	NA|288aa|up_9|NZ_CP016972.1_4114224_4115088_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP016972.1_4115842_4116613_-	NA	NA|549aa|up_7|NZ_CP016972.1_4116609_4118256_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP016972.1_4118252_4119116_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP016972.1_4119108_4120035_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP016972.1_4120036_4121662_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP016972.1_4121747_4122104_+	NA	NA|52aa|up_2|NZ_CP016972.1_4122203_4122359_+	NA	NA|652aa|up_1|NZ_CP016972.1_4122369_4124325_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP016972.1_4124360_4125059_-	NA	NA|173aa|down_0|NZ_CP016972.1_4125404_4125923_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP016972.1_4125923_4126907_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP016972.1_4126899_4128093_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP016972.1_4128098_4128920_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP016972.1_4129051_4129735_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP016972.1_4129734_4130472_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP016972.1_4130579_4130957_+	NA	NA|225aa|down_7|NZ_CP016972.1_4131055_4131730_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP016972.1_4131835_4132630_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP016972.1_4132636_4133092_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
