assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	1	322073-322159	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Orphan	CGGCGGCAACGCACGTGGGGCGC	23	1	1	322096-322136	NZ_CP009249.1_321560-321600	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA,NA|72aa|down_2|NZ_CP009249.1_325256_325472_-,NA|56aa|down_4|NZ_CP009249.1_327537_327705_+,NA|56aa|down_5|NZ_CP009249.1_327721_327889_+	NA|421aa|up_9|NZ_CP009249.1_311847_313110_+	COG2733, COG2733, Predicted membrane protein [Function unknown]	NA|185aa|up_8|NZ_CP009249.1_313150_313705_+	PRK13419, PRK13419, F0F1 ATP synthase subunit A; Provisional	NA|94aa|up_7|NZ_CP009249.1_313969_314251_+	pfam10724, DUF2516, Protein of unknown function (DUF2516)	NA|283aa|up_6|NZ_CP009249.1_314956_315805_-	pfam11209, DUF2993, Protein of unknown function (DUF2993)	NA|164aa|up_5|NZ_CP009249.1_315997_316489_-	pfam10698, DUF2505, Protein of unknown function (DUF2505)	NA|350aa|up_4|NZ_CP009249.1_316513_317563_+	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase	NA|150aa|up_3|NZ_CP009249.1_317639_318089_-	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|119aa|up_2|NZ_CP009249.1_318138_318495_+	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|381aa|up_1|NZ_CP009249.1_318819_319962_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|452aa|up_0|NZ_CP009249.1_320055_321411_+	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|574aa|down_0|NZ_CP009249.1_322214_323936_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|231aa|down_1|NZ_CP009249.1_324311_325004_-	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|72aa|down_2|NZ_CP009249.1_325256_325472_-	NA	NA|420aa|down_3|NZ_CP009249.1_325843_327103_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|56aa|down_4|NZ_CP009249.1_327537_327705_+	NA	NA|56aa|down_5|NZ_CP009249.1_327721_327889_+	NA	NA|55aa|down_6|NZ_CP009249.1_327952_328117_+	NF000539, plantaricin, plantaricin C family lantibiotic	NA|743aa|down_7|NZ_CP009249.1_328670_330899_+	cd04792, LanM-like, Cyclases involved in the biosynthesis of class II lantibiotics, and similar proteins	NA|705aa|down_8|NZ_CP009249.1_330885_333000_+	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]	NA|307aa|down_9|NZ_CP009249.1_333018_333939_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	2	528936-529033	2	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Unclear	GTGGTTTCGGGAACGGTGGTTTC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|136aa|up_9|NZ_CP009249.1_515470_515878_-,NA|235aa|down_8|NZ_CP009249.1_541022_541727_-	NA|136aa|up_9|NZ_CP009249.1_515470_515878_-	NA	NA|486aa|up_8|NZ_CP009249.1_515948_517406_-	pfam06738, ThrE, Putative threonine/serine exporter	NA|524aa|up_7|NZ_CP009249.1_518014_519586_-	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|300aa|up_6|NZ_CP009249.1_519582_520482_-	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head	NA|286aa|up_5|NZ_CP009249.1_522134_522992_-	TIGR03770, anch_rpt_perm, anchored repeat-type ABC transporter, permease subunit	NA|250aa|up_4|NZ_CP009249.1_522988_523738_-	TIGR03771, anch_rpt_ABC, anchored repeat-type ABC transporter, ATP-binding subunit	NA|298aa|up_3|NZ_CP009249.1_523737_524631_-	TIGR03773, anch_rpt_wall, putative ABC transporter-associated repeat protein	NA|513aa|up_2|NZ_CP009249.1_524631_526170_-	TIGR03772, anch_rpt_subst, anchored repeat ABC transporter, substrate-binding protein	NA|575aa|up_1|NZ_CP009249.1_526170_527895_-	TIGR03773, anch_rpt_wall, putative ABC transporter-associated repeat protein	NA|270aa|up_0|NZ_CP009249.1_527921_528731_-	TIGR03773, anch_rpt_wall, putative ABC transporter-associated repeat protein	NA|579aa|down_0|NZ_CP009249.1_531476_533213_+	PRK06546, PRK06546, pyruvate dehydrogenase; Provisional	NA|436aa|down_1|NZ_CP009249.1_533216_534524_-	COG2270, COG2270, Permeases of the major facilitator superfamily [General function prediction only]	NA|240aa|down_2|NZ_CP009249.1_534699_535419_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|425aa|down_3|NZ_CP009249.1_535636_536911_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|144aa|down_4|NZ_CP009249.1_537142_537574_-	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|423aa|down_5|NZ_CP009249.1_537608_538877_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|240aa|down_6|NZ_CP009249.1_538873_539593_+	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|480aa|down_7|NZ_CP009249.1_539576_541016_+	cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2	NA|235aa|down_8|NZ_CP009249.1_541022_541727_-	NA	NA|290aa|down_9|NZ_CP009249.1_541802_542672_+	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	3	658995-659094	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Orphan	TAGGGGGAATTTTGCAGGACTCCTAGGGGGA	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|93aa|up_6|NZ_CP009249.1_651818_652097_-,NA|124aa|up_5|NZ_CP009249.1_652089_652461_-,NA|66aa|up_4|NZ_CP009249.1_652650_652848_-,NA|455aa|up_1|NZ_CP009249.1_655329_656694_+,NA|216aa|up_0|NZ_CP009249.1_656690_657338_+,NA	NA|487aa|up_9|NZ_CP009249.1_648163_649624_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|416aa|up_8|NZ_CP009249.1_649669_650917_+	PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional	NA|218aa|up_7|NZ_CP009249.1_650913_651567_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|93aa|up_6|NZ_CP009249.1_651818_652097_-	NA	NA|124aa|up_5|NZ_CP009249.1_652089_652461_-	NA	NA|66aa|up_4|NZ_CP009249.1_652650_652848_-	NA	NA|243aa|up_3|NZ_CP009249.1_652948_653677_-	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|262aa|up_2|NZ_CP009249.1_654557_655343_+	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component	NA|455aa|up_1|NZ_CP009249.1_655329_656694_+	NA	NA|216aa|up_0|NZ_CP009249.1_656690_657338_+	NA	NA|2935aa|down_0|NZ_CP009249.1_659316_668121_+	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein]	NA|323aa|down_1|NZ_CP009249.1_668180_669149_+	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|340aa|down_2|NZ_CP009249.1_669145_670165_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|256aa|down_3|NZ_CP009249.1_670146_670914_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|134aa|down_4|NZ_CP009249.1_670910_671312_+	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|1752aa|down_5|NZ_CP009249.1_671526_676782_-	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|211aa|down_6|NZ_CP009249.1_677414_678047_-	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain	NA|158aa|down_7|NZ_CP009249.1_678056_678530_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|92aa|down_8|NZ_CP009249.1_678645_678921_+	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|180aa|down_9|NZ_CP009249.1_678927_679467_-	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	4	683139-683321	4	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Unclear	GATCAGATAACCGGTATCCGATC	23	0	0	NA	NA	NA	4	4	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA,NA	NA|256aa|up_9|NZ_CP009249.1_670146_670914_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|134aa|up_8|NZ_CP009249.1_670910_671312_+	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|1752aa|up_7|NZ_CP009249.1_671526_676782_-	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|211aa|up_6|NZ_CP009249.1_677414_678047_-	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain	NA|158aa|up_5|NZ_CP009249.1_678056_678530_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|92aa|up_4|NZ_CP009249.1_678645_678921_+	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|180aa|up_3|NZ_CP009249.1_678927_679467_-	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)	NA|425aa|up_2|NZ_CP009249.1_679494_680769_+	pfam04960, Glutaminase, Glutaminase	NA|116aa|up_1|NZ_CP009249.1_680765_681113_-	pfam04134, DUF393, Protein of unknown function, DUF393	NA|399aa|up_0|NZ_CP009249.1_681921_683118_+	pfam17964, Big_10, Bacterial Ig domain	NA|428aa|down_0|NZ_CP009249.1_683364_684648_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|460aa|down_1|NZ_CP009249.1_684693_686073_+	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|217aa|down_2|NZ_CP009249.1_686113_686764_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|347aa|down_3|NZ_CP009249.1_686776_687817_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|534aa|down_4|NZ_CP009249.1_688064_689666_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	DEDDh|217aa|down_5|NZ_CP009249.1_690118_690769_-	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|503aa|down_6|NZ_CP009249.1_691168_692677_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|270aa|down_7|NZ_CP009249.1_692734_693544_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|62aa|down_8|NZ_CP009249.1_693625_693811_+	pfam04024, PspC, PspC domain	NA|476aa|down_9|NZ_CP009249.1_693928_695356_-	pfam01083, Cutinase, Cutinase
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	5	774459-774558	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Orphan	GGCCCCCGCGCGTCCGGCCACCGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|408aa|up_7|NZ_CP009249.1_765016_766240_-,NA|181aa|up_4|NZ_CP009249.1_767677_768220_-,NA|169aa|down_8|NZ_CP009249.1_784608_785115_+	NA|123aa|up_9|NZ_CP009249.1_763982_764351_+	sd00045, ANK, ankyrin repeats	NA|216aa|up_8|NZ_CP009249.1_764372_765020_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|408aa|up_7|NZ_CP009249.1_765016_766240_-	NA	NA|278aa|up_6|NZ_CP009249.1_766226_767060_-	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|88aa|up_5|NZ_CP009249.1_767177_767441_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|181aa|up_4|NZ_CP009249.1_767677_768220_-	NA	NA|616aa|up_3|NZ_CP009249.1_768243_770091_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|377aa|up_2|NZ_CP009249.1_770256_771387_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|452aa|up_1|NZ_CP009249.1_771449_772805_+	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|351aa|up_0|NZ_CP009249.1_773053_774106_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|483aa|down_0|NZ_CP009249.1_774630_776079_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|275aa|down_1|NZ_CP009249.1_776071_776896_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|312aa|down_2|NZ_CP009249.1_776892_777828_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|506aa|down_3|NZ_CP009249.1_777824_779342_-	cd08494, PBP2_NikA_DppA_OppA_like_6, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|254aa|down_4|NZ_CP009249.1_779616_780378_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|327aa|down_5|NZ_CP009249.1_780466_781447_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|377aa|down_6|NZ_CP009249.1_781443_782574_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|621aa|down_7|NZ_CP009249.1_782579_784442_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|169aa|down_8|NZ_CP009249.1_784608_785115_+	NA	NA|194aa|down_9|NZ_CP009249.1_785111_785693_+	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	6	2294181-2299092	1,6,1	PILER-CR,CRISPRCasFinder,CRT	no	cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Unclear	GCCTTCCCCGCATGAGCGGGGATGATCC,GCCTTCCCCGCATGAGCGGGGATGATCCC,GCCTTCCCCGCATGAGCGGGGATGATCCC	28,29,29	19	19	2294698-2294730|2295186-2295218|2295431-2295463|2296224-2296256|2296773-2296805|2296895-2296927|2298054-2298086|2298848-2298880|2294454-2294485|2294699-2294730|2295187-2295218|2295432-2295463|2295981-2296012|2296225-2296256|2296774-2296805|2296896-2296927|2298055-2298086|2298849-2298880|2298910-2298941	NZ_CP009249.1_1857348-1857380|NZ_CP009249.1_1872308-1872276|NZ_CP009249.1_1841576-1841544|NZ_CP009249.1_1882682-1882714|NZ_CP009249.1_1862591-1862623|NZ_CP009249.1_1861712-1861680|NZ_CP009249.1_1880699-1880731|NZ_CP009249.1_1606341-1606373|NZ_CP009249.1_1882297-1882328|NZ_CP009249.1_1857349-1857380|NZ_CP009249.1_1872307-1872276|NZ_CP009249.1_1841575-1841544|NZ_CP009249.1_1603188-1603219|NZ_CP009249.1_1882683-1882714|NZ_CP009249.1_1862592-1862623|NZ_CP009249.1_1861711-1861680|NZ_CP009249.1_1880700-1880731|NZ_CP009249.1_1606342-1606373|NZ_CP009249.1_1606517-1606486	I-E:I-E:I-E	80,80,80	80	Unclear	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA,NA|249aa|down_5|NZ_CP009249.1_2302765_2303512_+,NA|124aa|down_7|NZ_CP009249.1_2304900_2305272_+	NA|105aa|up_9|NZ_CP009249.1_2278391_2278706_-	PRK00004, rplX, 50S ribosomal protein L24; Reviewed	NA|123aa|up_8|NZ_CP009249.1_2278709_2279078_-	PRK05483, rplN, 50S ribosomal protein L14; Validated	NA|548aa|up_7|NZ_CP009249.1_2279645_2281289_+	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)	NA|535aa|up_6|NZ_CP009249.1_2281281_2282886_+	cd11383, YfjP, YfjP GTPase	NA|884aa|up_5|NZ_CP009249.1_2283153_2285805_+	pfam16640, Big_3_5, Bacterial Ig-like domain (group 3)	NA|434aa|up_4|NZ_CP009249.1_2285881_2287183_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|328aa|up_3|NZ_CP009249.1_2287806_2288790_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|314aa|up_2|NZ_CP009249.1_2288873_2289815_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|644aa|up_1|NZ_CP009249.1_2289811_2291743_+	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional	NA|572aa|up_0|NZ_CP009249.1_2292007_2293723_+	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold	cas7|210aa|down_0|NZ_CP009249.1_2299114_2299744_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|236aa|down_1|NZ_CP009249.1_2299746_2300454_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|221aa|down_2|NZ_CP009249.1_2300450_2301113_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|323aa|down_3|NZ_CP009249.1_2301117_2302086_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|117aa|down_4|NZ_CP009249.1_2302082_2302433_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|249aa|down_5|NZ_CP009249.1_2302765_2303512_+	NA	NA|286aa|down_6|NZ_CP009249.1_2303822_2304680_-	pfam00089, Trypsin, Trypsin	NA|124aa|down_7|NZ_CP009249.1_2304900_2305272_+	NA	NA|150aa|down_8|NZ_CP009249.1_2305494_2305944_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|95aa|down_9|NZ_CP009249.1_2306109_2306394_-	PRK05610, rpsQ, 30S ribosomal protein S17; Reviewed
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	7	2302495-2302709	2,2,7	CRT,PILER-CR,CRISPRCasFinder	no	cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Unclear	CGGCCCTCCCCGCACGAGCGGGGATGATCCC,CGGCCCTCCCCGCACGAGCGGGGATGATCCC,GCCCTCCCCGCACGAGCGGGGATGATCCC	31,31,29	6	6	2302587-2302616|2302648-2302677|2302588-2302617|2302649-2302678|2302587-2302618|2302648-2302679	NZ_CP009249.1_1603188-1603217|NZ_CP009249.1_1600850-1600879|NZ_CP009249.1_1603188-1603217|NZ_CP009249.1_1600850-1600879|NZ_CP009249.1_1603188-1603219|NZ_CP009249.1_1600850-1600881	I-E:I-E:I-E	3,3,3	3	Unclear	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA,NA|249aa|down_0|NZ_CP009249.1_2302765_2303512_+,NA|124aa|down_2|NZ_CP009249.1_2304900_2305272_+	NA|434aa|up_9|NZ_CP009249.1_2285881_2287183_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|328aa|up_8|NZ_CP009249.1_2287806_2288790_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|314aa|up_7|NZ_CP009249.1_2288873_2289815_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|644aa|up_6|NZ_CP009249.1_2289811_2291743_+	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional	NA|572aa|up_5|NZ_CP009249.1_2292007_2293723_+	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold	cas7|210aa|up_4|NZ_CP009249.1_2299114_2299744_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|236aa|up_3|NZ_CP009249.1_2299746_2300454_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|221aa|up_2|NZ_CP009249.1_2300450_2301113_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|323aa|up_1|NZ_CP009249.1_2301117_2302086_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|117aa|up_0|NZ_CP009249.1_2302082_2302433_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|249aa|down_0|NZ_CP009249.1_2302765_2303512_+	NA	NA|286aa|down_1|NZ_CP009249.1_2303822_2304680_-	pfam00089, Trypsin, Trypsin	NA|124aa|down_2|NZ_CP009249.1_2304900_2305272_+	NA	NA|150aa|down_3|NZ_CP009249.1_2305494_2305944_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|95aa|down_4|NZ_CP009249.1_2306109_2306394_-	PRK05610, rpsQ, 30S ribosomal protein S17; Reviewed	NA|77aa|down_5|NZ_CP009249.1_2306396_2306627_-	pfam00831, Ribosomal_L29, Ribosomal L29 protein	NA|139aa|down_6|NZ_CP009249.1_2306626_2307043_-	PRK09203, rplP, 50S ribosomal protein L16; Reviewed	NA|250aa|down_7|NZ_CP009249.1_2307046_2307796_-	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed	NA|121aa|down_8|NZ_CP009249.1_2307795_2308158_-	PRK00565, rplV, 50S ribosomal protein L22; Reviewed	NA|93aa|down_9|NZ_CP009249.1_2308161_2308440_-	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	8	2303665-2303815	8	CRISPRCasFinder	no	cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Unclear	GCCCTCCCCGCACGAGCGGGGATGATCCC	29	0	0	NA	NA	I-E	2	2	Unclear	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|249aa|up_0|NZ_CP009249.1_2302765_2303512_+,NA|124aa|down_1|NZ_CP009249.1_2304900_2305272_+	NA|328aa|up_9|NZ_CP009249.1_2287806_2288790_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|314aa|up_8|NZ_CP009249.1_2288873_2289815_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|644aa|up_7|NZ_CP009249.1_2289811_2291743_+	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional	NA|572aa|up_6|NZ_CP009249.1_2292007_2293723_+	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold	cas7|210aa|up_5|NZ_CP009249.1_2299114_2299744_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|236aa|up_4|NZ_CP009249.1_2299746_2300454_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|221aa|up_3|NZ_CP009249.1_2300450_2301113_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|323aa|up_2|NZ_CP009249.1_2301117_2302086_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|117aa|up_1|NZ_CP009249.1_2302082_2302433_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|249aa|up_0|NZ_CP009249.1_2302765_2303512_+	NA	NA|286aa|down_0|NZ_CP009249.1_2303822_2304680_-	pfam00089, Trypsin, Trypsin	NA|124aa|down_1|NZ_CP009249.1_2304900_2305272_+	NA	NA|150aa|down_2|NZ_CP009249.1_2305494_2305944_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|95aa|down_3|NZ_CP009249.1_2306109_2306394_-	PRK05610, rpsQ, 30S ribosomal protein S17; Reviewed	NA|77aa|down_4|NZ_CP009249.1_2306396_2306627_-	pfam00831, Ribosomal_L29, Ribosomal L29 protein	NA|139aa|down_5|NZ_CP009249.1_2306626_2307043_-	PRK09203, rplP, 50S ribosomal protein L16; Reviewed	NA|250aa|down_6|NZ_CP009249.1_2307046_2307796_-	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed	NA|121aa|down_7|NZ_CP009249.1_2307795_2308158_-	PRK00565, rplV, 50S ribosomal protein L22; Reviewed	NA|93aa|down_8|NZ_CP009249.1_2308161_2308440_-	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed	NA|279aa|down_9|NZ_CP009249.1_2308453_2309290_-	PRK09374, rplB, 50S ribosomal protein L2; Validated
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	9	2380432-2380622	9	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Orphan	ATTAGGCAACAACCACCCAAAAACCTGCACACCCGCCAAAACTCAAG	47	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|53aa|up_7|NZ_CP009249.1_2369406_2369565_-,NA|82aa|up_6|NZ_CP009249.1_2369674_2369920_-,NA|516aa|up_4|NZ_CP009249.1_2372744_2374292_+,NA	NA|1319aa|up_9|NZ_CP009249.1_2364320_2368277_+	TIGR02353, NON-RIBOSOMAL_PEPTIDE_SYNTHETASE, non-ribosomal peptide synthetase terminal domain of unknown function	NA|300aa|up_8|NZ_CP009249.1_2368351_2369251_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|53aa|up_7|NZ_CP009249.1_2369406_2369565_-	NA	NA|82aa|up_6|NZ_CP009249.1_2369674_2369920_-	NA	NA|548aa|up_5|NZ_CP009249.1_2370517_2372161_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|516aa|up_4|NZ_CP009249.1_2372744_2374292_+	NA	NA|92aa|up_3|NZ_CP009249.1_2374583_2374859_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|658aa|up_2|NZ_CP009249.1_2376023_2377997_-	TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family	NA|450aa|up_1|NZ_CP009249.1_2378091_2379441_+	PRK07907, PRK07907, hypothetical protein; Provisional	NA|297aa|up_0|NZ_CP009249.1_2379481_2380372_+	pfam18741, MTES_1575, REase_MTES_1575	NA|975aa|down_0|NZ_CP009249.1_2380842_2383767_+	PRK12644, PRK12644, putative monovalent cation/H+ antiporter subunit A; Reviewed	NA|166aa|down_1|NZ_CP009249.1_2383773_2384271_+	PRK07946, PRK07946, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|613aa|down_2|NZ_CP009249.1_2384267_2386106_+	PRK12665, PRK12665, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|177aa|down_3|NZ_CP009249.1_2386098_2386629_+	PRK08965, PRK08965, putative monovalent cation/H+ antiporter subunit E; Reviewed	NA|90aa|down_4|NZ_CP009249.1_2386625_2386895_+	PRK07948, PRK07948, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|119aa|down_5|NZ_CP009249.1_2386891_2387248_+	PRK12592, PRK12592, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|401aa|down_6|NZ_CP009249.1_2387244_2388447_+	PRK13375, pimE, mannosyltransferase; Provisional	NA|373aa|down_7|NZ_CP009249.1_2388443_2389562_-	PRK13517, PRK13517, glutamate--cysteine ligase	NA|85aa|down_8|NZ_CP009249.1_2389576_2389831_-	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|121aa|down_9|NZ_CP009249.1_2389817_2390180_+	PRK02888, PRK02888, nitrous-oxide reductase; Validated
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	10	2427010-2427158	10	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Orphan	CCGGTTCTGGTTTGGGTGCTGGT	23	0	0	NA	NA	NA	3	3	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|259aa|up_6|NZ_CP009249.1_2420465_2421242_+,NA|278aa|up_0|NZ_CP009249.1_2426107_2426941_-,NA|130aa|down_2|NZ_CP009249.1_2431165_2431555_+,NA|93aa|down_9|NZ_CP009249.1_2436786_2437065_+	NA|274aa|up_9|NZ_CP009249.1_2416776_2417598_+	pfam04213, HtaA, Htaa	NA|391aa|up_8|NZ_CP009249.1_2417681_2418854_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|430aa|up_7|NZ_CP009249.1_2419063_2420353_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|259aa|up_6|NZ_CP009249.1_2420465_2421242_+	NA	NA|396aa|up_5|NZ_CP009249.1_2421238_2422426_-	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|345aa|up_4|NZ_CP009249.1_2422503_2423538_-	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|393aa|up_3|NZ_CP009249.1_2423647_2424826_-	COG4833, COG4833, Predicted glycosyl hydrolase [Carbohydrate transport and metabolism]	NA|226aa|up_2|NZ_CP009249.1_2424878_2425556_-	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|180aa|up_1|NZ_CP009249.1_2425539_2426079_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|278aa|up_0|NZ_CP009249.1_2426107_2426941_-	NA	NA|279aa|down_0|NZ_CP009249.1_2427534_2428371_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|853aa|down_1|NZ_CP009249.1_2428412_2430971_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|130aa|down_2|NZ_CP009249.1_2431165_2431555_+	NA	NA|304aa|down_3|NZ_CP009249.1_2431544_2432456_-	cd13606, PBP2_ProX_like, Bacterial substrate-binding protein ProX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold	NA|212aa|down_4|NZ_CP009249.1_2432455_2433091_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|205aa|down_5|NZ_CP009249.1_2433091_2433706_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|270aa|down_6|NZ_CP009249.1_2433705_2434515_-	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter	NA|378aa|down_7|NZ_CP009249.1_2434760_2435894_+	cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant	NA|265aa|down_8|NZ_CP009249.1_2435899_2436694_-	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|93aa|down_9|NZ_CP009249.1_2436786_2437065_+	NA
GCF_001941565.1_ASM194156v1	NZ_CP009249	Corynebacterium phocae strain M408/89/1 chromosome, complete genome	11	2712323-2712429	11	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	Orphan	GTCGCGACTGTTTCCTCGCTAAGAAGCGAATTG	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|340aa|up_6|NZ_CP009249.1_2701873_2702893_+,NA|543aa|up_5|NZ_CP009249.1_2702958_2704587_+,NA|556aa|up_4|NZ_CP009249.1_2704698_2706366_+,NA|523aa|up_3|NZ_CP009249.1_2706459_2708028_+,NA|520aa|down_0|NZ_CP009249.1_2712599_2714159_+	NA|466aa|up_9|NZ_CP009249.1_2698322_2699720_+	PRK09427, PRK09427, bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA|407aa|up_8|NZ_CP009249.1_2699737_2700958_+	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|266aa|up_7|NZ_CP009249.1_2700959_2701757_+	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|340aa|up_6|NZ_CP009249.1_2701873_2702893_+	NA	NA|543aa|up_5|NZ_CP009249.1_2702958_2704587_+	NA	NA|556aa|up_4|NZ_CP009249.1_2704698_2706366_+	NA	NA|523aa|up_3|NZ_CP009249.1_2706459_2708028_+	NA	NA|574aa|up_2|NZ_CP009249.1_2708194_2709916_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|113aa|up_1|NZ_CP009249.1_2710026_2710365_-	PRK11797, PRK11797, D-ribose pyranase; Provisional	NA|304aa|up_0|NZ_CP009249.1_2710345_2711257_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|520aa|down_0|NZ_CP009249.1_2712599_2714159_+	NA	NA|353aa|down_1|NZ_CP009249.1_2714298_2715357_-	PRK03321, PRK03321, putative aminotransferase; Provisional	NA|560aa|down_2|NZ_CP009249.1_2715390_2717070_-	COG3961, COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]	NA|478aa|down_3|NZ_CP009249.1_2717150_2718584_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|386aa|down_4|NZ_CP009249.1_2718834_2719992_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|470aa|down_5|NZ_CP009249.1_2720076_2721486_-	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|311aa|down_6|NZ_CP009249.1_2721634_2722567_+	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional	NA|492aa|down_7|NZ_CP009249.1_2722670_2724146_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|262aa|down_8|NZ_CP009249.1_2724153_2724939_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|262aa|down_9|NZ_CP009249.1_2724923_2725709_-	TIGR02312, 2-keto-4-pentenoate_hydratase, 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
GCF_001941565.1_ASM194156v1	NZ_CP009250	Corynebacterium phocae strain M408/89/1 plasmid pCpho, complete sequence	1	7662-7769	1	CRISPRCasFinder	no			Orphan	GTCATATCCTCAACCGGCCGATCG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,WYL,csf3gr5,csf2gr7,cas6e,cas7,cas5,cas1,cas2	NA|177aa|up_3|NZ_CP009250.1_4239_4770_-,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|501aa|up_4|NZ_CP009250.1_2433_3936_-	pfam03090, Replicase, Replicase family	NA|177aa|up_3|NZ_CP009250.1_4239_4770_-	NA	NA|530aa|up_2|NZ_CP009250.1_4813_6403_-	COG5479, COG5479, Uncharacterized protein potentially involved in peptidoglycan biosynthesis [Cell envelope biogenesis, outer membrane]	NA|85aa|up_1|NZ_CP009250.1_6601_6856_-	PRK05096, PRK05096, guanosine 5'-monophosphate oxidoreductase; Provisional	NA|195aa|up_0|NZ_CP009250.1_6855_7440_-	cd02042, ParAB_family, partition proteins ParAB family	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
