The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019300	Prevotella intermedia ATCC 25611 = DSM 20706 strain ATCC 25611 chromosome I, complete sequence	1965935	364832	402919	1965935	transposase,integrase,protease	Staphylococcus_phage(20.0%)	32	363334:363351	409434:409451
363334:363351	attL	CCATATATATAAGGTGTA	NA	NA	NA	NA
WP_036860572.1|364832_366296_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_147285766.1|366318_366912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076123173.1|366986_367886_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_028906082.1|368361_368640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028906081.1|368794_370048_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_028910953.1|370146_371352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028906079.1|371335_375343_+	trypsin-like peptidase domain-containing protein	NA	A0A2H4PQV1	Staphylococcus_phage	27.2	2.9e-16
WP_036860785.1|375397_375577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028906078.1|375644_376424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_036860783.1|376744_376975_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_028906076.1|377074_378157_+	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	36.2	7.5e-52
WP_028906075.1|378143_379646_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_028906074.1|379647_382515_+	Z1 domain-containing protein	NA	NA	NA	NA	NA
WP_036860788.1|382507_383428_+	PD-(D/E)XK motif protein	NA	NA	NA	NA	NA
WP_028906072.1|383429_385544_+	AIPR family protein	NA	E5G6M2	Salmonella_phage	27.7	4.6e-05
WP_051129515.1|385640_386429_+	putative DNA binding domain-containing protein	NA	NA	NA	NA	NA
WP_051129514.1|386431_387031_+	hypothetical protein	NA	A0A1B3AYT3	Gordonia_phage	36.8	5.1e-10
WP_099046229.1|387137_387731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028906070.1|387748_389002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028906069.1|389022_389394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147285767.1|389655_389868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099046231.1|390022_390517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036860780.1|390529_391114_-	ATP-binding protein	NA	A0A097PAQ0	Streptococcus_pyogenes_phage	31.0	2.0e-06
WP_154654563.1|391121_391568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028906067.1|391592_391907_-	DUF3853 family protein	NA	NA	NA	NA	NA
WP_028906066.1|392722_393670_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_080651570.1|393679_394531_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_028906064.1|395224_395425_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036887550.1|395438_398873_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA	NA
WP_099046232.1|399058_399823_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_076123179.1|399826_400705_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_076123182.1|402019_402919_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
409434:409451	attR	TACACCTTATATATATGG	NA	NA	NA	NA
>prophage 2
NZ_CP019300	Prevotella intermedia ATCC 25611 = DSM 20706 strain ATCC 25611 chromosome I, complete sequence	1965935	1447374	1457206	1965935	tRNA	Emiliania_huxleyi_virus(16.67%)	7	NA	NA
WP_028906277.1|1447374_1448565_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	V5LQ39	Emiliania_huxleyi_virus	32.0	2.3e-46
WP_028906278.1|1448753_1449782_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	24.7	7.5e-09
WP_028906279.1|1449782_1450475_+	methyltransferase	NA	A7IX92	Paramecium_bursaria_Chlorella_virus	31.4	2.6e-05
WP_028906280.1|1450582_1453057_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	39.6	1.2e-148
WP_028906281.1|1453046_1454174_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.0	2.0e-79
WP_028906282.1|1454183_1455410_+	LptF/LptG family permease	NA	NA	NA	NA	NA
WP_028906283.1|1455466_1457206_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.0	4.7e-56
>prophage 1
NZ_CP019301	Prevotella intermedia ATCC 25611 = DSM 20706 strain ATCC 25611 chromosome II, complete sequence	708235	574280	620922	708235	transposase,integrase	unidentified_phage(22.22%)	37	571828:571842	631747:631761
571828:571842	attL	GAACCCGACATCGAA	NA	NA	NA	NA
WP_076123438.1|574280_575180_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_076123440.1|575268_575511_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_028905472.1|576392_576878_-	DUF1896 domain-containing protein	NA	NA	NA	NA	NA
WP_023925217.1|576930_578199_-|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	35.2	2.0e-24
WP_028905800.1|579735_581256_+	helicase	NA	H2DE57	Erwinia_phage	27.8	6.4e-33
WP_028905801.1|581297_582251_-	Abi family protein	NA	A0A059NT88	Lactococcus_phage	25.5	2.5e-14
WP_028905802.1|582626_582935_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_028905803.1|582922_584983_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_028905804.1|584986_585361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028905805.1|585351_585705_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019968986.1|586305_586992_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_028905806.1|586992_592500_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_028905807.1|592499_594056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028905808.1|594067_598192_-	protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	28.1	1.3e-14
WP_036860667.1|598205_600365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028905810.1|600367_601030_-	CpXC domain-containing protein	NA	NA	NA	NA	NA
WP_028905811.1|601044_602448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028905812.1|602444_604472_-	N-6 DNA methylase	NA	A0A142K7G3	Mycobacterium_phage	30.7	6.6e-41
WP_019968994.1|604486_604717_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004352487.1|605506_605815_+	DUF3853 family protein	NA	NA	NA	NA	NA
WP_028905813.1|605811_606864_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_028905814.1|607046_607937_+	toprim domain-containing protein	NA	NA	NA	NA	NA
WP_028905815.1|608038_608386_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_028905816.1|608382_609309_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_028905817.1|609330_609990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028905818.1|610042_610609_-	metallophosphatase domain-containing protein	NA	A0A1V0SDK2	Indivirus	34.9	2.9e-23
WP_028905819.1|610618_611347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028905820.1|611365_612490_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_028905821.1|612502_613786_-	DUF1016 family protein	NA	Q9JMP5	Wolbachia_phage	46.9	4.3e-62
WP_028905822.1|613798_615091_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_028905823.1|615574_616807_+|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	39.4	2.0e-32
WP_028905824.1|616832_617300_+	DUF1896 domain-containing protein	NA	NA	NA	NA	NA
WP_028905825.1|617439_617787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006256422.1|618139_618571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_036860694.1|618576_618789_+	PcfK-like family protein	NA	NA	NA	NA	NA
WP_036860672.1|618868_619906_-|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	27.7	3.2e-07
WP_028905828.1|619914_620922_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
631747:631761	attR	TTCGATGTCGGGTTC	NA	NA	NA	NA
