The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	232127	264408	5800473	integrase,transposase	uncultured_virus(50.0%)	29	219337:219352	272792:272807
219337:219352	attL	TGGTGGCGCTGGCCGA	NA	NA	NA	NA
WP_076195865.1|232127_233066_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	38.6	1.7e-47
WP_076195867.1|233205_233364_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_076204194.1|233418_234693_-	YncE family protein	NA	NA	NA	NA	NA
WP_076204197.1|234731_235496_-	creatininase family protein	NA	NA	NA	NA	NA
WP_083686047.1|235567_237949_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.2	1.4e-79
WP_076195869.1|238057_238396_-	copper-binding protein	NA	NA	NA	NA	NA
WP_076195871.1|238494_238965_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_076195873.1|239000_240413_-	copper oxidase	NA	NA	NA	NA	NA
WP_076195874.1|240441_241863_-	TolC family protein	NA	NA	NA	NA	NA
WP_076195876.1|241873_242191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076195878.1|242312_242744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076195880.1|242795_243086_-	CopK family periplasmic copper-binding protein	NA	NA	NA	NA	NA
WP_076195882.1|243312_243993_+	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.5	1.1e-37
WP_076195884.1|244033_245434_+	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_157900024.1|247088_247406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157900025.1|247505_247769_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_157900341.1|247852_248221_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_076195893.1|248217_248553_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_076195895.1|248628_250215_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	41.9	5.4e-99
WP_076195897.1|250422_250758_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_076195899.1|250835_252347_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	47.5	7.9e-116
WP_076195901.1|252754_252952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076195903.1|253455_253728_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_157900026.1|254109_254418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076195907.1|254417_255308_+	hypothetical protein	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	38.9	1.1e-35
WP_076195909.1|255461_255644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157900027.1|255802_256159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076195915.1|259968_262950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083686050.1|262959_264408_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
272792:272807	attR	TCGGCCAGCGCCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	895903	906119	5800473		Enterobacteria_phage(33.33%)	7	NA	NA
WP_076197017.1|895903_896986_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.0	6.1e-86
WP_076197019.1|896996_897887_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.4	9.0e-27
WP_076199094.1|897907_898792_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.6	2.5e-98
WP_076197021.1|898791_899376_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	55.4	5.9e-51
WP_157900353.1|899435_900245_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_076197023.1|900234_901485_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	23.2	5.3e-09
WP_076197025.1|901484_906119_+	glycosyltransferase	NA	A0A0N9QAD0	Chrysochromulina_ericina_virus	33.9	3.5e-29
>prophage 3
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	1605921	1616015	5800473	tRNA	Escherichia_phage(16.67%)	9	NA	NA
WP_076198159.1|1605921_1606815_+	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	37.5	7.6e-34
WP_076198160.1|1607089_1607992_+	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	41.9	3.2e-56
WP_076198161.1|1608010_1608238_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_076198163.1|1608299_1609205_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.6	1.8e-67
WP_076198165.1|1609285_1612261_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.6	5.9e-139
WP_076198167.1|1612419_1613196_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_076198169.1|1613239_1614127_+	proline dioxygenase	NA	A0A1E1EWR1	Acanthamoeba_castellanii_mimivirus	35.3	2.1e-23
WP_076198171.1|1614251_1615136_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_076198173.1|1615148_1616015_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	38.2	6.7e-43
>prophage 4
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	2256811	2264221	5800473		Vibrio_phage(16.67%)	9	NA	NA
WP_076199242.1|2256811_2257456_-	nicotinamide mononucleotide transporter	NA	A0A126HGA3	Vibrio_phage	22.0	7.2e-10
WP_076199243.1|2257619_2257898_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_076199245.1|2257918_2259205_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	64.4	4.8e-154
WP_076199247.1|2259254_2259545_-	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_076199249.1|2259541_2260396_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.1	8.0e-49
WP_076199251.1|2260392_2262072_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.8	1.3e-148
WP_076199253.1|2262166_2263450_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	31.1	1.2e-32
WP_076199255.1|2263446_2263731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076199257.1|2263774_2264221_+	dUTP diphosphatase	NA	G0YQD9	Erwinia_phage	63.9	1.8e-44
>prophage 5
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	2319672	2329289	5800473		uncultured_phage(33.33%)	12	NA	NA
WP_076199377.1|2319672_2322024_+	hypothetical protein	NA	D6PEU8	uncultured_phage	35.7	1.4e-98
WP_076199379.1|2322036_2323581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157900148.1|2323587_2323821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157900149.1|2323819_2324113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157900150.1|2324109_2324274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076199383.1|2324270_2324561_+	hypothetical protein	NA	K4F946	Cronobacter_phage	42.0	2.2e-11
WP_157900151.1|2324649_2325612_+	hypothetical protein	NA	A0A218MLX4	uncultured_virus	31.2	7.7e-24
WP_076199385.1|2325636_2326560_+	DUF5309 domain-containing protein	NA	A0A1B1IQN8	uncultured_Mediterranean_phage	51.1	1.4e-75
WP_076199387.1|2326625_2326937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076199389.1|2326936_2327224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076199391.1|2327223_2327841_+	hypothetical protein	NA	A0A1B1INU6	uncultured_Mediterranean_phage	32.7	1.3e-21
WP_157900152.1|2327837_2329289_+	hypothetical protein	NA	D6PEY0	uncultured_phage	26.8	1.8e-32
>prophage 6
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	3115979	3171067	5800473	coat,plate,tRNA	Planktothrix_phage(22.22%)	51	NA	NA
WP_076200128.1|3115979_3116966_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_076200129.1|3116969_3117341_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_076200130.1|3117340_3120211_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	30.8	4.8e-21
WP_076200131.1|3120235_3121732_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_076200132.1|3121811_3122432_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_076205018.1|3122595_3124218_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.0e-15
WP_083686673.1|3124229_3125324_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_076205021.1|3125341_3125707_-	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_076200134.1|3125748_3126075_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_076200135.1|3126128_3127160_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
WP_076200136.1|3127174_3129025_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_076200137.1|3129102_3129900_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_076205024.1|3129913_3130576_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_076205027.1|3130696_3131422_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.0	2.9e-31
WP_076200138.1|3131468_3132251_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	27.7	1.7e-13
WP_076200139.1|3132261_3133233_-	NAD(P)-dependent oxidoreductase	NA	A0A0E3FNQ3	Synechococcus_phage	28.6	4.6e-08
WP_076200140.1|3133336_3134008_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_076200141.1|3134009_3134681_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_076200142.1|3134711_3135587_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_076200143.1|3135632_3136535_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_076200144.1|3136527_3137034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076200145.1|3137230_3138049_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_076200146.1|3138053_3139178_-	TIGR03364 family FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_076205029.1|3139199_3139892_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_076200147.1|3139897_3141646_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_076200148.1|3141642_3142755_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.7	8.3e-30
WP_076200149.1|3142770_3143817_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_076205032.1|3143987_3144746_+	phosphonate utilization associated transcriptional regulator	NA	NA	NA	NA	NA
WP_076200150.1|3144750_3145302_+	HD domain-containing protein	NA	A0A2K9L141	Tupanvirus	33.5	5.4e-22
WP_157900190.1|3145294_3146185_+	EamA family transporter	NA	NA	NA	NA	NA
WP_083686280.1|3146316_3147186_+	DNA ligase	NA	F2Y2Y2	Organic_Lake_phycodnavirus	32.4	7.9e-28
WP_076205040.1|3147308_3147887_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_076200151.1|3148005_3148548_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_083686281.1|3148571_3149396_+	molecular chaperone	NA	NA	NA	NA	NA
WP_076200152.1|3149401_3151885_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_076200153.1|3151894_3152851_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_076200154.1|3152863_3153676_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_083686282.1|3153767_3155681_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_076200156.1|3155806_3156496_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_162277363.1|3156492_3159930_-	response regulator	NA	A0A1V0SGX0	Hokovirus	29.7	4.4e-53
WP_076200158.1|3160120_3162394_-	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_076200159.1|3162531_3162957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200160.1|3163006_3163921_+	paraslipin	NA	NA	NA	NA	NA
WP_076205046.1|3163962_3164340_+	DUF2237 domain-containing protein	NA	NA	NA	NA	NA
WP_076200161.1|3164549_3165074_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_083686674.1|3165129_3165762_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_076200163.1|3165854_3166481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076200164.1|3166473_3167496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076200165.1|3167492_3168626_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_076200166.1|3168676_3170557_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_076205048.1|3170569_3171067_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 7
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	3408885	3422185	5800473	integrase	Pseudomonas_virus(22.22%)	17	3417169:3417184	3432198:3432213
WP_076200362.1|3408885_3410832_+	hypothetical protein	NA	U6C712	Ralstonia_phage	37.9	2.4e-93
WP_076200363.1|3410855_3411536_+	3'-5' exonuclease	NA	I3PUZ1	Vibrio_phage	43.3	4.9e-41
WP_076200364.1|3411541_3411919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200365.1|3411953_3412700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200366.1|3412707_3412992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200367.1|3412988_3414935_+	DNA cytosine methyltransferase	NA	Q9ZXI4	Pseudomonas_virus	63.3	2.5e-178
WP_076200368.1|3414931_3415981_+	phage Gp37/Gp68 family protein	NA	Q8W6R4	Burkholderia_virus	50.9	1.0e-82
WP_076200369.1|3415977_3416703_+	hypothetical protein	NA	H2BDG4	Pseudomonas_virus	42.1	7.1e-38
WP_076200370.1|3416699_3417014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200371.1|3417010_3417238_+	hypothetical protein	NA	NA	NA	NA	NA
3417169:3417184	attL	CTCGGCCGCCACCGGC	NA	NA	NA	NA
WP_076200372.1|3417234_3417651_+	hypothetical protein	NA	A0A2H4J3D3	uncultured_Caudovirales_phage	46.8	1.4e-22
WP_076200373.1|3417647_3418268_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	40.3	8.8e-05
WP_076200374.1|3418264_3418732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200375.1|3418728_3419388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200376.1|3419384_3419627_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_076200377.1|3419623_3420646_+|integrase	tyrosine-type recombinase/integrase	integrase	E5E3N4	Burkholderia_phage	40.8	1.8e-31
WP_076205091.1|3420850_3422185_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	29.9	8.7e-42
3432198:3432213	attR	CTCGGCCGCCACCGGC	NA	NA	NA	NA
>prophage 8
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	3998462	4016657	5800473	integrase,plate,tRNA,tail	Pseudomonas_phage(41.67%)	20	3994810:3994827	4010643:4010660
3994810:3994827	attL	GCCACGCCGGCCTTGCCG	NA	NA	NA	NA
WP_076200957.1|3998462_4001978_+	PAS domain-containing hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	32.0	9.0e-62
WP_083686345.1|4001995_4002976_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_076200961.1|4003138_4004206_+|integrase	site-specific integrase	integrase	I6NSG1	Burkholderia_phage	55.2	1.1e-108
WP_076200963.1|4004230_4004566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076200964.1|4004616_4004973_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076200966.1|4004969_4005545_-	hypothetical protein	NA	A0A2I7S3K6	Vibrio_phage	33.0	2.4e-12
WP_076200968.1|4005544_4006084_-	N-acetylmuramidase	NA	G0YQI3	Erwinia_phage	52.2	1.2e-47
WP_076200969.1|4006080_4006533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076200971.1|4006537_4006954_-	hypothetical protein	NA	N0DPE7	Edwardsiella_phage	61.9	7.0e-06
WP_076200973.1|4006973_4007507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076200974.1|4007529_4008129_-	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_076200976.1|4008119_4009148_-|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	44.4	3.9e-66
WP_076205261.1|4009140_4009524_-	hypothetical protein	NA	Q8W616	Enterobacteria_phage	51.6	2.1e-25
WP_076205272.1|4009577_4010027_-|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	49.4	8.8e-31
WP_076200977.1|4010053_4011331_-	hypothetical protein	NA	B5TK72	Pseudomonas_phage	39.7	8.6e-63
4010643:4010660	attR	GCCACGCCGGCCTTGCCG	NA	NA	NA	NA
WP_076200979.1|4011327_4012602_-	hypothetical protein	NA	A0A192Y5U9	Salmonella_phage	31.8	1.2e-35
WP_076200980.1|4012610_4014302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083686348.1|4014442_4014772_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_076200984.1|4014762_4015122_-|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	52.9	1.9e-28
WP_076200986.1|4015163_4016657_-|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	51.1	8.3e-134
>prophage 9
NZ_CP019236	Rhodoferax koreense strain DCY-110 chromosome, complete genome	5800473	4021918	4033032	5800473	terminase,portal,tail,head,capsid,protease	Burkholderia_phage(33.33%)	12	NA	NA
WP_076201000.1|4021918_4022272_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_076201002.1|4022268_4022766_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_076201003.1|4022841_4023183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076201005.1|4023254_4024484_-|capsid	phage major capsid protein	capsid	C7BGH0	Burkholderia_phage	38.0	1.4e-65
WP_076201006.1|4024557_4025322_-|protease	Clp protease ClpP	protease	C7BGG9	Burkholderia_phage	52.8	1.3e-50
WP_083686349.1|4025311_4026652_-|portal	phage portal protein	portal	A0A1B0RXK4	Streptococcus_phage	35.0	1.3e-48
WP_076201008.1|4026648_4028349_-|terminase	terminase large subunit	terminase	Q8W631	Enterobacteria_phage	37.8	7.8e-104
WP_076201009.1|4028345_4028903_-|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
WP_076201011.1|4029064_4029421_-	HNH endonuclease	NA	A0A1B3AYP6	Gordonia_phage	36.1	2.2e-08
WP_076201012.1|4029526_4029934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157900248.1|4029920_4030271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083686357.1|4030647_4033032_-	hypothetical protein	NA	A0A2D1GN57	Marinobacter_phage	35.9	1.2e-46
